; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0001400 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001400
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr02:14050271..14051091
RNA-Seq ExpressionPI0001400
SyntenyPI0001400
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036767.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.3e-10174.43Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WYKNI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+ICN+NEQYMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYD GVGQSSDFG GYYNS+AG SS++FGQ YYDLG+DPSSSYMHGHGRGRG+HNEYLY
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY

Query:  YEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        YE PAAVPEQ DE                QQQEN E ++QQRV  RRRQPARNRRRPGCGTH
Subjt:  YEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

KAA0067080.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.4e-10174.81Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYINWYKNI++LYIT+PGA + HLRSNN RLR+VADDPQQVL+ICN+NEQYMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYD  VGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEYLY
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY

Query:  YEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        YE PAAVPEQ +E                QQQENQE ++QQRV  RRRQPARNRRRPGCGTH
Subjt:  YEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

TYJ95836.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]2.3e-10174.43Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WYKNI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+ICN+NEQYMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYD GVGQSSDFG GYYNS+AG SS++FGQ YYDLG+DPSSSYMHGHGRGRG+HNEYLY
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY

Query:  YEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        YE PAAVPEQ DE                QQQEN E ++QQRV  RRRQPARNRRRPGCGTH
Subjt:  YEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

TYK27427.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]6.0e-9771.59Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WYKNI++LYIT+PGAA+ HLRSNN+RLR++ADDPQQVL+ICN+NEQYMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTAD--VSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY
        QE D+LEEV+Q  +EVPP+ QTQ+ +    VSP+MMMP FG  YYD GVGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEY
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTAD--VSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY

Query:  LYYEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        LYY+ PAAVPEQ DE                QQQEN E ++QQRV  RRRQ A+NR+RPGCGTH
Subjt:  LYYEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

XP_008449513.1 PREDICTED: mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo]6.0e-9771.59Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WYKNI++LYIT+PGAA+ HLRSNN+RLR++ADDPQQVL+ICN+NEQYMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTAD--VSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY
        QE D+LEEV+Q  +EVPP+ QTQ+ +    VSP+MMMP FG  YYD GVGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEY
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTAD--VSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY

Query:  LYYEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        LYY+ PAAVPEQ DE                QQQEN E ++QQRV  RRRQ A+NR+RPGCGTH
Subjt:  LYYEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

TrEMBL top hitse value%identityAlignment
A0A1S3BLK4 mediator of RNA polymerase II transcription subunit 12-like isoform X12.9e-9771.59Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WYKNI++LYIT+PGAA+ HLRSNN+RLR++ADDPQQVL+ICN+NEQYMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTAD--VSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY
        QE D+LEEV+Q  +EVPP+ QTQ+ +    VSP+MMMP FG  YYD GVGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEY
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTAD--VSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY

Query:  LYYEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        LYY+ PAAVPEQ DE                QQQEN E ++QQRV  RRRQ A+NR+RPGCGTH
Subjt:  LYYEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

A0A5A7T598 Serine/threonine-protein phosphatase 7 long form-like protein1.1e-10174.43Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WYKNI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+ICN+NEQYMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYD GVGQSSDFG GYYNS+AG SS++FGQ YYDLG+DPSSSYMHGHGRGRG+HNEYLY
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY

Query:  YEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        YE PAAVPEQ DE                QQQEN E ++QQRV  RRRQPARNRRRPGCGTH
Subjt:  YEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

A0A5A7VIP6 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.6e-10274.81Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYINWYKNI++LYIT+PGA + HLRSNN RLR+VADDPQQVL+ICN+NEQYMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYD  VGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEYLY
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY

Query:  YEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        YE PAAVPEQ +E                QQQENQE ++QQRV  RRRQPARNRRRPGCGTH
Subjt:  YEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

A0A5D3BAB0 Serine/threonine-protein phosphatase 7 long form-like protein1.1e-10174.43Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WYKNI++LYIT+PGAA+ HLRSNN RLR+VADDPQQVL+ICN+NEQYMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY
        QEPD+LEEV+Q  +EVPP+ QTQS    VSP+MMMP FGT YYD GVGQSSDFG GYYNS+AG SS++FGQ YYDLG+DPSSSYMHGHGRGRG+HNEYLY
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLY

Query:  YEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        YE PAAVPEQ DE                QQQEN E ++QQRV  RRRQPARNRRRPGCGTH
Subjt:  YEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

A0A5D3DUI1 Mediator of RNA polymerase II transcription subunit 12-like isoform X12.9e-9771.59Show/hide
Query:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV
        MRW NRRRF ATG    QFD+DVT EYI+WYKNI++LYIT+PGAA+ HLRSNN+RLR++ADDPQQVL+ICN+NEQYMENIHYMYDVPIVPAPVQRRR  V
Subjt:  MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARV

Query:  QEPDELEEVEQQVQEVPPVRQTQSGTAD--VSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY
        QE D+LEEV+Q  +EVPP+ QTQ+ +    VSP+MMMP FG  YYD GVGQSSDFG GYYNSEAG SS++FGQ YYDLG+DPSSSYMHGHGRGRGEHNEY
Subjt:  QEPDELEEVEQQVQEVPPVRQTQSGTAD--VSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEY

Query:  LYYEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH
        LYY+ PAAVPEQ DE                QQQEN E ++QQRV  RRRQ A+NR+RPGCGTH
Subjt:  LYYEQPAAVPEQPDE----------------QQQENQEGLEQQRVHGRRRQPARNRRRPGCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGATGCTCGTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAAAAATATTACCAGACT
CTATATCACTCGACCGGGAGCAGCTGTAGGTCATCTGAGGTCGAACAATAGTAGACTTCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAATAACG
AGCAGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAA
CAACAAGTGCAAGAAGTGCCTCCTGTGAGACAAACACAAAGCGGGACTGCTGACGTTAGTCCAATGATGATGATGCCGGCATTTGGAACAGGATATTATGATTTAGGAGT
CGGTCAATCGTCAGACTTCGGGACAGGATATTATAATTCAGAGGCAGGTCCATCATCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCGTCTTCAT
ACATGCATGGACATGGGCGTGGTCGTGGAGAACATAACGAATATTTGTACTACGAACAGCCTGCAGCGGTACCCGAGCAGCCAGATGAGCAACAACAAGAGAATCAGGAG
GGACTAGAGCAACAAAGAGTGCATGGTCGACGACGGCAACCAGCAAGAAATCGGCGACGTCCAGGTTGTGGAACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGCGATGGCTAAATCGCAGAAGATTTATTGCTACGGGATGCTCGTTTGGGCAATTTGATGTTGATGTAACTCCAGAATACATCAATTGGTACAAAAATATTACCAGACT
CTATATCACTCGACCGGGAGCAGCTGTAGGTCATCTGAGGTCGAACAATAGTAGACTTCGGGATGTTGCAGATGATCCACAGCAGGTCCTAGATATATGCAACAATAACG
AGCAGTACATGGAGAACATACACTATATGTACGATGTACCTATTGTACCTGCACCAGTTCAAAGGAGACGTGCTCGAGTGCAAGAGCCTGATGAATTGGAAGAAGTTGAA
CAACAAGTGCAAGAAGTGCCTCCTGTGAGACAAACACAAAGCGGGACTGCTGACGTTAGTCCAATGATGATGATGCCGGCATTTGGAACAGGATATTATGATTTAGGAGT
CGGTCAATCGTCAGACTTCGGGACAGGATATTATAATTCAGAGGCAGGTCCATCATCGTCAAACTTTGGACAAGGATACTACGATTTAGGGACCGATCCATCGTCTTCAT
ACATGCATGGACATGGGCGTGGTCGTGGAGAACATAACGAATATTTGTACTACGAACAGCCTGCAGCGGTACCCGAGCAGCCAGATGAGCAACAACAAGAGAATCAGGAG
GGACTAGAGCAACAAAGAGTGCATGGTCGACGACGGCAACCAGCAAGAAATCGGCGACGTCCAGGTTGTGGAACACATTGA
Protein sequenceShow/hide protein sequence
MRWLNRRRFIATGCSFGQFDVDVTPEYINWYKNITRLYITRPGAAVGHLRSNNSRLRDVADDPQQVLDICNNNEQYMENIHYMYDVPIVPAPVQRRRARVQEPDELEEVE
QQVQEVPPVRQTQSGTADVSPMMMMPAFGTGYYDLGVGQSSDFGTGYYNSEAGPSSSNFGQGYYDLGTDPSSSYMHGHGRGRGEHNEYLYYEQPAAVPEQPDEQQQENQE
GLEQQRVHGRRRQPARNRRRPGCGTH