CuGenDBv2

Gene ID	PI0001491
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Exportin-T
Genome location	chr09:9107457..9113557
RNA-Seq Expression	PI0001491
Synteny	PI0001491
Gene Ontology terms	GO:0048856 - anatomical structure development (biological process) GO:0071528 - tRNA re-export from nucleus (biological process) GO:0005643 - nuclear pore (cellular component) GO:0005737 - cytoplasm (cellular component) GO:0016363 - nuclear matrix (cellular component) GO:0000049 - tRNA binding (molecular function) GO:0031267 - small GTPase binding (molecular function)
InterPro domains	IPR011989 - Armadillo-like helical IPR040017 - Exportin-T

Homology

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GenBank top hits

e value

%identity

Alignment

XP_004141704.1 exportin-T [Cucumis sativus]

4.2e-24

80.72

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Query:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV
        FP   KALEQ LAESEPKELVGF VLLNQLICKFSTSVHGILEDVFPTI S+IFNI  R S     G+NIEEIRELQELQRIV
Subjt:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV

XP_008462297.1 PREDICTED: exportin-T [Cucumis melo]

1.9e-24

80.72

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Query:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV
        FP   KALEQ LAESEPKELVGF VLLNQLICKFSTSVHGILEDVFPTIAS+IFN+  R S     G+NIEEIRELQELQRIV
Subjt:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV

XP_022953461.1 exportin-T-like [Cucurbita moschata]

3.5e-23

78.31

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Query:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV
        FP   KALEQ L ESEPKE+VGF VLLNQLICKFSTSVHGILEDVFPTIAS+IF+I  R S     G+NIEEIRELQELQRIV
Subjt:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV

XP_023548548.1 exportin-T-like [Cucurbita pepo subsp. pepo]

7.9e-23

77.11

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Query:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV
        FP   KALEQ L +SEPKE+VGF VLLNQLICKFSTSVHGILEDVFPTIAS+IF+I  R S     G+NIEEIRELQELQRIV
Subjt:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV

XP_038898562.1 exportin-T [Benincasa hispida]

1.4e-24

81.93

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Query:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV
        FP   KALEQ LAESEPKELVGF VLLNQLICKFSTSVHGILEDVFPTIAS+IFNI  R S     G+NIEEIRELQELQRIV
Subjt:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV

TrEMBL top hits

e value

%identity

Alignment

A0A0A0K6Z9 Exportin-T

2.0e-24

80.72

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Query:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV
        FP   KALEQ LAESEPKELVGF VLLNQLICKFSTSVHGILEDVFPTI S+IFNI  R S     G+NIEEIRELQELQRIV
Subjt:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV

A0A1S3CI57 Exportin-T

9.0e-25

80.72

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Query:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV
        FP   KALEQ LAESEPKELVGF VLLNQLICKFSTSVHGILEDVFPTIAS+IFN+  R S     G+NIEEIRELQELQRIV
Subjt:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV

A0A5A7UYX4 Exportin-T

9.0e-25

80.72

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Query:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV
        FP   KALEQ LAESEPKELVGF VLLNQLICKFSTSVHGILEDVFPTIAS+IFN+  R S     G+NIEEIRELQELQRIV
Subjt:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV

A0A6J1D5T7 Exportin-T

3.8e-23

78.31

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Query:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV
        FP   KALEQ LAESEPKE+VGF VLLNQLICKFSTSVHGILEDVFPTIAS+IFNI    S     G+N EEIRELQELQRIV
Subjt:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV

A0A6J1GNA6 Exportin-T

1.7e-23

78.31

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Query:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV
        FP   KALEQ L ESEPKE+VGF VLLNQLICKFSTSVHGILEDVFPTIAS+IF+I  R S     G+NIEEIRELQELQRIV
Subjt:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV

SwissProt top hits

e value

%identity

Alignment

Q7PC79 Exportin-T

4.2e-19

59.04

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Query:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV
        FP   KALEQ LA+SEPKE+VGF VLLNQLICKF++++H ILE+V+P +A +IFN+  R     R G+  EE+REL ELQR++
Subjt:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV

Q8H3A7 Exportin-T

4.2e-11

45.68

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Query:  PIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFSSFRTG--SNIEEIRELQELQR
        P    AL Q L ++E K++  F  L+NQ+ICKF +S + +LEDVFP IAS + ++     +F  G  SN EE+RELQEL++
Subjt:  PIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFSSFRTG--SNIEEIRELQELQR

Arabidopsis top hits

e value

%identity

Alignment

AT1G72560.1 ARM repeat superfamily protein

3.0e-20

59.04

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Query:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV
        FP   KALEQ LA+SEPKE+VGF VLLNQLICKF++++H ILE+V+P +A +IFN+  R     R G+  EE+REL ELQR++
Subjt:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV

AT1G72560.2 ARM repeat superfamily protein

3.0e-20

59.04

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Query:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV
        FP   KALEQ LA+SEPKE+VGF VLLNQLICKF++++H ILE+V+P +A +IFN+  R     R G+  EE+REL ELQR++
Subjt:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV

AT1G72560.3 ARM repeat superfamily protein

3.0e-20

59.04

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Query:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV
        FP   KALEQ LA+SEPKE+VGF VLLNQLICKF++++H ILE+V+P +A +IFN+  R     R G+  EE+REL ELQR++
Subjt:  FPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFNITKRFS-SFRTGSNIEEIRELQELQRIV

Sequences

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CDS sequence

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ATGTGGTGGTCAACGACGACAGAGGTGGTGGCGACGACCTTAAGGGCAGCGACGATCTCCCTTCTGGCCTCAACATATTCAACAAGTGTTCTTGATAAGTGCCTCTACGG
ACTAAGGTCCTCTCTTTTATACATCGAATGGTGGAAACTTTCCGCACATCTGTTTTTCCCTATTTTCCAAAAGGCTTTGGAGCAGTCGCTTGCAGAAAGTGAGCCGAAGG
AGTTGGTTGGTTTCCCTGTGTTACTTAATCAACTAATCTGCAAGTTTAGCACTTCGGTCCATGGGATTTTGGAGGATGTATTTCCAACAATTGCTAGTCAGATTTTCAAC
ATTACCAAGAGATTCTCTTCCTTCAGGACCGGAAGCAATATTGAGGAAATTCGTGAACTACAAGAGCTTCAACGAATAGTCATTTCTTCATGTGATCCCCTAAATCGAGA
AGCTACTTGGAACCAATGA

mRNA sequence

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TCTCTTCTCGTCGAAAGCCCCAAATACAAATGCCCTAAAACGTCGCTCGTGCTTCAACCCCCCAAATTCGATCGTCTTGTACTCCAACCCCCCTCGAATGTCACTCCAAG
CCACCGATCCAGACACTCTGTTGCTCCAAGCAACTGATCCAACACCGGTGACTCCTATTCCAAGCCACCAGTCTCGATGCACGCGGGATTCAACAGTGTTTGGAGTCAAC
AACTTGTGGCTAAGGCTAGCAATGAAGATGGCTAAGGTTTAGCAGCACATGGTTCGACGAGTTACAACATTCGACATGGGATGACTTAATCGGCGTTTGCGATTGATGTG
GTGGTCAACGACGACAGAGGTGGTGGCGACGACCTTAAGGGCAGCGACGATCTCCCTTCTGGCCTCAACATATTCAACAAGTGTTCTTGATAAGTGCCTCTACGGACTAA
GGTCCTCTCTTTTATACATCGAATGGTGGAAACTTTCCGCACATCTGTTTTTCCCTATTTTCCAAAAGGCTTTGGAGCAGTCGCTTGCAGAAAGTGAGCCGAAGGAGTTG
GTTGGTTTCCCTGTGTTACTTAATCAACTAATCTGCAAGTTTAGCACTTCGGTCCATGGGATTTTGGAGGATGTATTTCCAACAATTGCTAGTCAGATTTTCAACATTAC
CAAGAGATTCTCTTCCTTCAGGACCGGAAGCAATATTGAGGAAATTCGTGAACTACAAGAGCTTCAACGAATAGTCATTTCTTCATGTGATCCCCTAAATCGAGAAGCTA
CTTGGAACCAATGA

Protein sequence

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MWWSTTTEVVATTLRAATISLLASTYSTSVLDKCLYGLRSSLLYIEWWKLSAHLFFPIFQKALEQSLAESEPKELVGFPVLLNQLICKFSTSVHGILEDVFPTIASQIFN
ITKRFSSFRTGSNIEEIRELQELQRIVISSCDPLNREATWNQ

PI0001491 (gene) of Melon (PI 482460) v1 genome