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PI0001552 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001552
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr07:11728553..11728918
RNA-Seq ExpressionPI0001552
SyntenyPI0001552
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0044261.1 uncharacterized protein E6C27_scaffold2741G00190 [Cucumis melo var. makuwa]7.6e-2153.51Show/hide
Query:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE
        M+K CPHHCIP  VLMEQF F LSEDTQQT                           + EWRD GFG  +ENRGNRG TD+I+EGVD+NT + LQ +V E
Subjt:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE

Query:  MNKLLQSTTLSQVN
        MNKLLQS  L+Q N
Subjt:  MNKLLQSTTLSQVN

KAA0046468.1 hypothetical protein E6C27_scaffold543G00470 [Cucumis melo var. makuwa]2.7e-2665.71Show/hide
Query:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE
        +VKAC HH I  CVLME+FYF LSED QQT DV+F GG+LR+SYNQ K ML  M SNSQE RD    S+QEN  NRG+TD   EG+D+N M+ LQ QVTE
Subjt:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE

Query:  MNKLL
        MNKLL
Subjt:  MNKLL

KAA0048713.1 hypothetical protein E6C27_scaffold43G00050 [Cucumis melo var. makuwa]7.9e-3466.67Show/hide
Query:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE
        M+K CPHHCIP CVLMEQFYFGLS++T Q+ +++F GGMLRSSYNQIK ML  MASNSQEWRD  FGSR ++RG +G   RIE+G+D + M+ALQ QV E
Subjt:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE

Query:  MNKLLQSTTLSQVN
        MN +LQS  L QVN
Subjt:  MNKLLQSTTLSQVN

KGN44484.1 hypothetical protein Csa_015918 [Cucumis sativus]6.0e-2660.87Show/hide
Query:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE
        +VKACP H IP CV ME FYFGLS+DT Q  + +F GGMLRSSYNQIK  L +M++NSQEW D GFGSR     +RG+T   +EG+DK+ ++ LQ Q+  
Subjt:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE

Query:  MNKLLQSTTLSQVNA
        MN LLQS TLSQVNA
Subjt:  MNKLLQSTTLSQVNA

KGN53801.1 hypothetical protein Csa_014772 [Cucumis sativus]2.0e-2962.61Show/hide
Query:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE
        M+K C HH I GCV++EQFYFGLS DTQQ  D +F GGMLR S N IK  L AM SNSQEWRD  FGS  E++GNR +  R  +G + N M+ LQ QVTE
Subjt:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE

Query:  MNKLLQSTTLSQVNA
        MNKLLQS  LSQ+NA
Subjt:  MNKLLQSTTLSQVNA

TrEMBL top hitse value%identityAlignment
A0A0A0K6F9 Uncharacterized protein2.9e-2660.87Show/hide
Query:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE
        +VKACP H IP CV ME FYFGLS+DT Q  + +F GGMLRSSYNQIK  L +M++NSQEW D GFGSR     +RG+T   +EG+DK+ ++ LQ Q+  
Subjt:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE

Query:  MNKLLQSTTLSQVNA
        MN LLQS TLSQVNA
Subjt:  MNKLLQSTTLSQVNA

A0A0A0L0Y4 Uncharacterized protein9.7e-3062.61Show/hide
Query:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE
        M+K C HH I GCV++EQFYFGLS DTQQ  D +F GGMLR S N IK  L AM SNSQEWRD  FGS  E++GNR +  R  +G + N M+ LQ QVTE
Subjt:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE

Query:  MNKLLQSTTLSQVNA
        MNKLLQS  LSQ+NA
Subjt:  MNKLLQSTTLSQVNA

A0A5A7TRQ0 Uncharacterized protein3.7e-2153.51Show/hide
Query:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE
        M+K CPHHCIP  VLMEQF F LSEDTQQT                           + EWRD GFG  +ENRGNRG TD+I+EGVD+NT + LQ +V E
Subjt:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE

Query:  MNKLLQSTTLSQVN
        MNKLLQS  L+Q N
Subjt:  MNKLLQSTTLSQVN

A0A5A7TUE1 Uncharacterized protein1.3e-2665.71Show/hide
Query:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE
        +VKAC HH I  CVLME+FYF LSED QQT DV+F GG+LR+SYNQ K ML  M SNSQE RD    S+QEN  NRG+TD   EG+D+N M+ LQ QVTE
Subjt:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE

Query:  MNKLL
        MNKLL
Subjt:  MNKLL

A0A5D3CC26 Uncharacterized protein3.8e-3466.67Show/hide
Query:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE
        M+K CPHHCIP CVLMEQFYFGLS++T Q+ +++F GGMLRSSYNQIK ML  MASNSQEWRD  FGSR ++RG +G   RIE+G+D + M+ALQ QV E
Subjt:  MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTE

Query:  MNKLLQSTTLSQVN
        MN +LQS  L QVN
Subjt:  MNKLLQSTTLSQVN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGAAGGCATGTCCCCATCATTGCATCCCTGGATGTGTCTTGATGGAACAGTTTTATTTTGGGTTGAGTGAGGATACACAGCAGACGACTGATGTTATATTTGAAGG
AGGGATGCTTAGAAGCTCCTATAACCAGATAAAATATATGTTGGGCGCTATGGCTAGCAATAGTCAAGAATGGCGAGATGGTGGTTTTGGCTCTCGACAAGAGAACAGAG
GAAATAGAGGAAAAACAGACAGGATTGAGGAAGGAGTGGACAAGAATACGATGTTGGCACTTCAAAGACAAGTCACCGAGATGAACAAGCTTCTACAATCTACAACATTA
TCGCAAGTAAATGCGTGGGAAGTTCTGTTCACGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGAAGGCATGTCCCCATCATTGCATCCCTGGATGTGTCTTGATGGAACAGTTTTATTTTGGGTTGAGTGAGGATACACAGCAGACGACTGATGTTATATTTGAAGG
AGGGATGCTTAGAAGCTCCTATAACCAGATAAAATATATGTTGGGCGCTATGGCTAGCAATAGTCAAGAATGGCGAGATGGTGGTTTTGGCTCTCGACAAGAGAACAGAG
GAAATAGAGGAAAAACAGACAGGATTGAGGAAGGAGTGGACAAGAATACGATGTTGGCACTTCAAAGACAAGTCACCGAGATGAACAAGCTTCTACAATCTACAACATTA
TCGCAAGTAAATGCGTGGGAAGTTCTGTTCACGTGA
Protein sequenceShow/hide protein sequence
MVKACPHHCIPGCVLMEQFYFGLSEDTQQTTDVIFEGGMLRSSYNQIKYMLGAMASNSQEWRDGGFGSRQENRGNRGKTDRIEEGVDKNTMLALQRQVTEMNKLLQSTTL
SQVNAWEVLFT