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PI0001560 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001560
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGATA zinc finger domain-containing protein 10-like isoform X2
Genome locationchr07:7054268..7054747
RNA-Seq ExpressionPI0001560
SyntenyPI0001560
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025972.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]3.0e-4973.43Show/hide
Query:  MEEIHYMYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGR
        MEEIH MY +PIVPP ++ G V+VEE ELDEVYHNVEE+ P  Q Q+QTGYGSPM+MMP FGVGYCD EV   + D GVGPSSSYMDVGPSTSY+HGH  
Subjt:  MEEIHYMYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGR

Query:  GRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSR
            GEHNEYLY+EAPT+V D QEYQQEPENQEEL Q RVQSR
Subjt:  GRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSR

KAA0049532.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.6e-5878.43Show/hide
Query:  MYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGRGRGRGE
        MYD+PIVPP V+ G VRVEE ELDEVYHNVEEVPP  QTQSQTGYGSPMMMMP FG GYCDSEV  G+ D G+GP SSYMDVGPS SY+HGH  GRG GE
Subjt:  MYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGRGRGRGE

Query:  HNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSRRRQPTRNRRRPGCGTH
        HNEYLY+EAP DV D QEYQQEPENQE+  Q RVQSRRRQPTRNRR   CGTH
Subjt:  HNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSRRRQPTRNRRRPGCGTH

KAA0062642.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]1.3e-6379.87Show/hide
Query:  MEEIHYMYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGR
        MEEIH MYD+PIVPPPV+ GCVRVEE ELD+VYHNVEEVP   QTQSQTGYGSPM MMP F  GYCD EVGIG+ D GVGPSSSY+DV PSTSY+HGH  
Subjt:  MEEIHYMYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGR

Query:  GRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSRRRQPTRNRRRPGCGTH
         RG GEHNEYLY+EAP DV D QEYQQEPENQE+  Q RVQSRRRQPTRNRRRPGCGTH
Subjt:  GRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSRRRQPTRNRRRPGCGTH

TYK01176.1 GATA zinc finger domain-containing protein 10-like isoform X2 [Cucumis melo var. makuwa]1.8e-6279.25Show/hide
Query:  MEEIHYMYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGR
        MEEIH MYD+PIVPPPV+ GCVRVEE ELD+VYHNVEEVP   QTQSQTGYGSPM MMP F  GYCD EVGIG+ D GVGPSSSY+DV PSTSY+HGH  
Subjt:  MEEIHYMYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGR

Query:  GRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSRRRQPTRNRRRPGCGTH
         RG GEHNEYLY+EAP DV D QEYQQEPENQE+  Q RVQSRRRQPTRNRR PGCGTH
Subjt:  GRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSRRRQPTRNRRRPGCGTH

TYK23842.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]9.3e-5976.1Show/hide
Query:  MEEIHYMYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGR
        ME+IH +YD+PIVPPPV+    RVEE ELDEVYHNVEEVPP  QTQSQTGYGSPM MMP FG GYCDSEV IG+ D  VGP SSYMDVGPSTSY++GH  
Subjt:  MEEIHYMYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGR

Query:  GRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSRRRQPTRNRRRPGCGTH
        GRG GEHNEYLY+EAPTDV D QEYQQEP+NQE+  Q RVQSRRRQP RNR+  GCGTH
Subjt:  GRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSRRRQPTRNRRRPGCGTH

TrEMBL top hitse value%identityAlignment
A0A5A7SLF8 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.5e-4973.43Show/hide
Query:  MEEIHYMYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGR
        MEEIH MY +PIVPP ++ G V+VEE ELDEVYHNVEE+ P  Q Q+QTGYGSPM+MMP FGVGYCD EV   + D GVGPSSSYMDVGPSTSY+HGH  
Subjt:  MEEIHYMYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGR

Query:  GRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSR
            GEHNEYLY+EAPT+V D QEYQQEPENQEEL Q RVQSR
Subjt:  GRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSR

A0A5A7V342 Mediator of RNA polymerase II transcription subunit 12-like isoform X16.1e-6479.87Show/hide
Query:  MEEIHYMYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGR
        MEEIH MYD+PIVPPPV+ GCVRVEE ELD+VYHNVEEVP   QTQSQTGYGSPM MMP F  GYCD EVGIG+ D GVGPSSSY+DV PSTSY+HGH  
Subjt:  MEEIHYMYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGR

Query:  GRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSRRRQPTRNRRRPGCGTH
         RG GEHNEYLY+EAP DV D QEYQQEPENQE+  Q RVQSRRRQPTRNRRRPGCGTH
Subjt:  GRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSRRRQPTRNRRRPGCGTH

A0A5D3BSG8 GATA zinc finger domain-containing protein 10-like isoform X28.8e-6379.25Show/hide
Query:  MEEIHYMYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGR
        MEEIH MYD+PIVPPPV+ GCVRVEE ELD+VYHNVEEVP   QTQSQTGYGSPM MMP F  GYCD EVGIG+ D GVGPSSSY+DV PSTSY+HGH  
Subjt:  MEEIHYMYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGR

Query:  GRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSRRRQPTRNRRRPGCGTH
         RG GEHNEYLY+EAP DV D QEYQQEPENQE+  Q RVQSRRRQPTRNRR PGCGTH
Subjt:  GRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSRRRQPTRNRRRPGCGTH

A0A5D3CXX3 GATA zinc finger domain-containing protein 10-like isoform X27.7e-5978.43Show/hide
Query:  MYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGRGRGRGE
        MYD+PIVPP V+ G VRVEE ELDEVYHNVEEVPP  QTQSQTGYGSPMMMMP FG GYCDSEV  G+ D G+GP SSYMDVGPS SY+HGH  GRG GE
Subjt:  MYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGRGRGRGE

Query:  HNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSRRRQPTRNRRRPGCGTH
        HNEYLY+EAP DV D QEYQQEPENQE+  Q RVQSRRRQPTRNRR   CGTH
Subjt:  HNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSRRRQPTRNRRRPGCGTH

A0A5D3DJV7 Serine/threonine-protein phosphatase 7 long form-like protein4.5e-5976.1Show/hide
Query:  MEEIHYMYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGR
        ME+IH +YD+PIVPPPV+    RVEE ELDEVYHNVEEVPP  QTQSQTGYGSPM MMP FG GYCDSEV IG+ D  VGP SSYMDVGPSTSY++GH  
Subjt:  MEEIHYMYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGR

Query:  GRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSRRRQPTRNRRRPGCGTH
        GRG GEHNEYLY+EAPTDV D QEYQQEP+NQE+  Q RVQSRRRQP RNR+  GCGTH
Subjt:  GRGRGEHNEYLYYEAPTDVPDPQEYQQEPENQEELGQPRVQSRRRQPTRNRRRPGCGTH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACATGGGATGTGTTCGAGTGGAAGAACCTGAACTTGATGAAGTTTACCATAACGTAGA
AGAAGTACCTCCAGTGATACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGCCAGCTTTTGGAGTAGGATATTGTGATTCTGAGGTCGGTATAGGAC
ATAATGACTTAGGGGTCGGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATACATGGACATGGACGCGGACGCGGCCGCGGAGAACATAACGAATAT
CTGTACTATGAAGCACCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGCTGGGGCAACCAAGAGTTCAGAGTCGACGACGACAACC
AACACGAAATCGACGACGTCCGGGTTGTGGAACACATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAGATACATTATATGTACGATGTACCTATTGTACCTCCACCAGTTAACATGGGATGTGTTCGAGTGGAAGAACCTGAACTTGATGAAGTTTACCATAACGTAGA
AGAAGTACCTCCAGTGATACAAACACAGAGCCAAACTGGTTATGGTAGCCCGATGATGATGATGCCAGCTTTTGGAGTAGGATATTGTGATTCTGAGGTCGGTATAGGAC
ATAATGACTTAGGGGTCGGTCCATCGTCTTCATACATGGATGTCGGACCATCAACTTCTTACATACATGGACATGGACGCGGACGCGGCCGCGGAGAACATAACGAATAT
CTGTACTATGAAGCACCTACAGACGTTCCAGATCCACAAGAGTACCAACAAGAACCAGAGAATCAAGAGGAGCTGGGGCAACCAAGAGTTCAGAGTCGACGACGACAACC
AACACGAAATCGACGACGTCCGGGTTGTGGAACACATTGA
Protein sequenceShow/hide protein sequence
MEEIHYMYDVPIVPPPVNMGCVRVEEPELDEVYHNVEEVPPVIQTQSQTGYGSPMMMMPAFGVGYCDSEVGIGHNDLGVGPSSSYMDVGPSTSYIHGHGRGRGRGEHNEY
LYYEAPTDVPDPQEYQQEPENQEELGQPRVQSRRRQPTRNRRRPGCGTH