; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0001580 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001580
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionDouble-stranded RNA-binding protein 2-like
Genome locationchr12:23259499..23260335
RNA-Seq ExpressionPI0001580
SyntenyPI0001580
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8653233.1 hypothetical protein Csa_019953 [Cucumis sativus]1.2e-6292.7Show/hide
Query:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC
        MASVCISECVDNACIVSAARPTY+NLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSRED VVPETTTQ CFGKI+RRRRKPAT RGGRRRSRC
Subjt:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC

Query:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDG-RSRP
         AMVKAAA+Q SSGALLF+FRRLLCCVAKVDG RSRP
Subjt:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDG-RSRP

XP_008457578.1 PREDICTED: uncharacterized protein LOC103497245 [Cucumis melo]1.3e-6191.11Show/hide
Query:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC
        MASVCISECVDNACIVSAA+PTY+NLQRWSEEEKWSTERRRPRPRAA+GISRRQMYLRSYTFSREDTVVPETTTQ CFGKI+RRR++PA  RG RRRSRC
Subjt:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC

Query:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDGRSR
        FAMVKAAATQASSGAL+ MFRRLLCCVAKVDGRSR
Subjt:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDGRSR

XP_011648508.1 uncharacterized protein LOC105434501 [Cucumis sativus]1.2e-6292.7Show/hide
Query:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC
        MASVCISECVDNACIVSAARPTY+NLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSRED VVPETTTQ CFGKI+RRRRKPAT RGGRRRSRC
Subjt:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC

Query:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDG-RSRP
         AMVKAAA+Q SSGALLF+FRRLLCCVAKVDG RSRP
Subjt:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDG-RSRP

XP_022970388.1 uncharacterized protein LOC111469389 [Cucurbita maxima]2.7e-4677.44Show/hide
Query:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC
        MASVCISEC+++ACI+ A RPTY +LQRW EEE  S E RRPR RAADGISRRQMYLRSYTFSREDT V E+T Q C GK+KRRRR PA  RGG RRSRC
Subjt:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC

Query:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDGR
        FA+V+AAA +ASSGALL MFRRLLCCVAKVDGR
Subjt:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDGR

XP_023519361.1 uncharacterized protein LOC111782795 [Cucurbita pepo subsp. pepo]1.1e-4475.94Show/hide
Query:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC
        MASVCISEC+++ CI+ A RPTY +LQRW EEE  S E RRPR RAADGISRRQMYLRSYTFSREDT V E+T Q C GK+KRRRR PA  RGG RRSRC
Subjt:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC

Query:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDGR
        FA+V+AAA +ASSGALL MFRRLL CVAKVDGR
Subjt:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDGR

TrEMBL top hitse value%identityAlignment
A0A0A0LXY3 Uncharacterized protein5.7e-6392.7Show/hide
Query:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC
        MASVCISECVDNACIVSAARPTY+NLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSRED VVPETTTQ CFGKI+RRRRKPAT RGGRRRSRC
Subjt:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC

Query:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDG-RSRP
         AMVKAAA+Q SSGALLF+FRRLLCCVAKVDG RSRP
Subjt:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDG-RSRP

A0A1S3C748 uncharacterized protein LOC1034972456.3e-6291.11Show/hide
Query:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC
        MASVCISECVDNACIVSAA+PTY+NLQRWSEEEKWSTERRRPRPRAA+GISRRQMYLRSYTFSREDTVVPETTTQ CFGKI+RRR++PA  RG RRRSRC
Subjt:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC

Query:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDGRSR
        FAMVKAAATQASSGAL+ MFRRLLCCVAKVDGRSR
Subjt:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDGRSR

A0A5A7SXG3 Uncharacterized protein6.3e-6291.11Show/hide
Query:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC
        MASVCISECVDNACIVSAA+PTY+NLQRWSEEEKWSTERRRPRPRAA+GISRRQMYLRSYTFSREDTVVPETTTQ CFGKI+RRR++PA  RG RRRSRC
Subjt:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC

Query:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDGRSR
        FAMVKAAATQASSGAL+ MFRRLLCCVAKVDGRSR
Subjt:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDGRSR

A0A6J1HP59 uncharacterized protein LOC1114647459.2e-4575.94Show/hide
Query:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC
        MASVCISEC+++ACI+ A RPTY +LQRW EEE  S E RRPR RAADGISRRQMYLRSYTF REDTVV E+T Q C GK+K RRR PA  RGG RRSRC
Subjt:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC

Query:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDGR
        FA+V+AAA +ASSGALL MFRRLL CVAKVDGR
Subjt:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDGR

A0A6J1I3Q2 uncharacterized protein LOC1114693891.3e-4677.44Show/hide
Query:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC
        MASVCISEC+++ACI+ A RPTY +LQRW EEE  S E RRPR RAADGISRRQMYLRSYTFSREDT V E+T Q C GK+KRRRR PA  RGG RRSRC
Subjt:  MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRC

Query:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDGR
        FA+V+AAA +ASSGALL MFRRLLCCVAKVDGR
Subjt:  FAMVKAAATQASSGALLFMFRRLLCCVAKVDGR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G46300.1 unknown protein7.0e-0533.81Show/hide
Query:  MASVCISECV----DNACIVSAARP--TYINLQRWSEEE-----KWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPA
        MAS CI +CV    D+ C+    RP  TY NL +W   E       + +  + R    D IS RQMYLRSYTFS E+    E       G+   RR   +
Subjt:  MASVCISECV----DNACIVSAARP--TYINLQRWSEEE-----KWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPA

Query:  TTRGGRRRSRCFAMVKAAATQASSGALLFMFRRLLCCVA
          RGG  R +  A   A     +     F+FR +  C++
Subjt:  TTRGGRRRSRCFAMVKAAATQASSGALLFMFRRLLCCVA

AT3G46310.1 unknown protein3.5e-0440.54Show/hide
Query:  MASVCISECV---DNACIVSAARPTYINLQRWSEEE-----KWSTERRRPRPRAADGISRRQMYLRSYTFSRED
        MAS CI +CV   +NA  V   R T+  + +W   E       S +    R  A + +S RQMYLRSYTFSR++
Subjt:  MASVCISECV---DNACIVSAARPTYINLQRWSEEE-----KWSTERRRPRPRAADGISRRQMYLRSYTFSRED

AT5G02640.1 unknown protein7.8e-1237.18Show/hide
Query:  MASVCISECVDNA----CIVSAARPTYINLQRWSEEE-KWSTERRR----PRPRAADGISRRQMYLRSYTFSRED-----TVVPETTTQKCFGKIK---R
        M SVCIS C+++A      V   R +Y+NL +W E + ++    RR    P  R  D IS RQMYLRSYTFSRED       V   T   C G++K    
Subjt:  MASVCISECVDNA----CIVSAARPTYINLQRWSEEE-KWSTERRR----PRPRAADGISRRQMYLRSYTFSRED-----TVVPETTTQKCFGKIK---R

Query:  RRRKPATTRG--------GRRRSRCFAMVKAAATQASSGALLFMFRRLLCCVAKVD
         RRK     G         RRR     + +    + +   +L +FRRLL C A VD
Subjt:  RRRKPATTRG--------GRRRSRCFAMVKAAATQASSGALLFMFRRLLCCVAKVD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCTCCGTCTGCATATCCGAATGCGTCGACAACGCCTGCATCGTCTCTGCTGCCCGGCCGACGTACATCAACCTGCAGCGGTGGTCGGAGGAGGAGAAGTGGTCTAC
AGAGCGCCGCCGTCCAAGGCCGAGAGCGGCGGACGGTATCTCTCGCCGGCAAATGTACTTGCGGAGTTACACCTTCTCCAGAGAGGACACCGTTGTCCCTGAGACTACAA
CTCAGAAATGCTTTGGGAAGATCAAGCGGCGGCGCCGTAAGCCGGCGACGACTCGCGGCGGCCGGAGGAGGAGCCGATGTTTCGCCATGGTGAAGGCTGCCGCCACTCAG
GCTTCTTCCGGCGCCTTGCTCTTCATGTTCCGACGGTTGCTTTGTTGCGTCGCGAAAGTTGACGGTCGCTCGCGGCCGTAA
mRNA sequenceShow/hide mRNA sequence
TTCAACAAAAAAAAAATTCAATAATTAATCCATCTTTCTTAGTTGTTATTTCTTAACAATCAAACTAATCTCTCTCTCTTGCAATTTATTTTTTGACATTAATCATCTTT
CTTAGTTGTAATCTCAATTACACACAAAAACCCATTTCCCCAAAATTCCATCATTCTCGCCGGAATTTCTTCACCGACGGTACGATGGCCTCCGTCTGCATATCCGAATG
CGTCGACAACGCCTGCATCGTCTCTGCTGCCCGGCCGACGTACATCAACCTGCAGCGGTGGTCGGAGGAGGAGAAGTGGTCTACAGAGCGCCGCCGTCCAAGGCCGAGAG
CGGCGGACGGTATCTCTCGCCGGCAAATGTACTTGCGGAGTTACACCTTCTCCAGAGAGGACACCGTTGTCCCTGAGACTACAACTCAGAAATGCTTTGGGAAGATCAAG
CGGCGGCGCCGTAAGCCGGCGACGACTCGCGGCGGCCGGAGGAGGAGCCGATGTTTCGCCATGGTGAAGGCTGCCGCCACTCAGGCTTCTTCCGGCGCCTTGCTCTTCAT
GTTCCGACGGTTGCTTTGTTGCGTCGCGAAAGTTGACGGTCGCTCGCGGCCGTAAGTGTTTGTGAATTTTGTGAAATCAAAGGTTTCATTTTTCTTTTCTTTCTTTTTTT
TTCTTTTAATATGAAATAAAGGTAAGGAAACATGAAAATTGACTCCCTCGAAGGGCGATGGGCCATATTCACTTTGGCACGTAAATTCCACGAGTCATTTCATGAACCAA
TTGATTAACATTCTCGTCAGTAATTAGATATATGCACAAATCTAATAACTGTGAGCTTACATCTTCA
Protein sequenceShow/hide protein sequence
MASVCISECVDNACIVSAARPTYINLQRWSEEEKWSTERRRPRPRAADGISRRQMYLRSYTFSREDTVVPETTTQKCFGKIKRRRRKPATTRGGRRRSRCFAMVKAAATQ
ASSGALLFMFRRLLCCVAKVDGRSRP