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PI0001584 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001584
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr11:18140455..18143352
RNA-Seq ExpressionPI0001584
SyntenyPI0001584
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038045.1 uncharacterized protein E6C27_scaffold36G002470 [Cucumis melo var. makuwa]7.7e-1677.05Show/hide
Query:  MPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGHGRTYQNIQRRA
        MPPP A  +VIN NDNQ EGDGSDGLDDDQVTLL E RR GH VVR +G GR YQNIQRRA
Subjt:  MPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGHGRTYQNIQRRA

KAA0043652.1 uncharacterized protein E6C27_scaffold320G001000 [Cucumis melo var. makuwa]5.9e-4083.81Show/hide
Query:  MDNQNDEVRLREAQQGVIAQIISSMEALTDRLDRLEIENRARERMPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGHGRTYQN
        M+NQNDEV+LREAQQGVIA++IS+MEALTDRL+R EIENRARERMPPPLA  ++IN NDNQ EGDGSD LDDDQVTLLGEPRRVGHGVVR RG GR YQN
Subjt:  MDNQNDEVRLREAQQGVIAQIISSMEALTDRLDRLEIENRARERMPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGHGRTYQN

Query:  IQRRA
        IQRRA
Subjt:  IQRRA

KAA0047036.1 uncharacterized protein E6C27_scaffold829G00200 [Cucumis melo var. makuwa]2.3e-2883.75Show/hide
Query:  MEALTDRLDRLEIENRARERMPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGHGRTYQNIQRR
        MEALTDRL+RLEIENRARERMPPPLA  + IN N+NQYEGDG D LDDDQVTLL EPRRVGHGVVR RGHG+ YQNIQRR
Subjt:  MEALTDRLDRLEIENRARERMPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGHGRTYQNIQRR

TYK09709.1 uncharacterized protein E5676_scaffold447G001250 [Cucumis melo var. makuwa]2.5e-3083.53Show/hide
Query:  IISSMEALTDRLDRLEIENRARERMPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGHGRTYQNIQRRA
        +IS+MEALTDRL+R EIENRARERMPPPLA  ++IN NDNQ EGDGSD LDDDQVTLLGEPRRVGHGVVR RG GR YQNIQRRA
Subjt:  IISSMEALTDRLDRLEIENRARERMPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGHGRTYQNIQRRA

XP_022157414.1 LOW QUALITY PROTEIN: uncharacterized protein LOC111024115 [Momordica charantia]1.3e-1549.5Show/hide
Query:  EVRLREAQQGVIAQIISSMEALTDRLDRLEIENRARERMPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPR----RVGHGVVRGRGHGRTYQNIQ
        + R REA +G + ++I SMEALT+R+ RLE +N+A  R+PPP    V+   ++++YEGDGSD  +DDQ T+L  PR     VG G+ RGRG GR Y N Q
Subjt:  EVRLREAQQGVIAQIISSMEALTDRLDRLEIENRARERMPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPR----RVGHGVVRGRGHGRTYQNIQ

Query:  R
        R
Subjt:  R

TrEMBL top hitse value%identityAlignment
A0A5A7T993 Retrotrans_gag domain-containing protein3.7e-1677.05Show/hide
Query:  MPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGHGRTYQNIQRRA
        MPPP A  +VIN NDNQ EGDGSDGLDDDQVTLL E RR GH VVR +G GR YQNIQRRA
Subjt:  MPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGHGRTYQNIQRRA

A0A5A7TK52 Retrotrans_gag domain-containing protein2.8e-4083.81Show/hide
Query:  MDNQNDEVRLREAQQGVIAQIISSMEALTDRLDRLEIENRARERMPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGHGRTYQN
        M+NQNDEV+LREAQQGVIA++IS+MEALTDRL+R EIENRARERMPPPLA  ++IN NDNQ EGDGSD LDDDQVTLLGEPRRVGHGVVR RG GR YQN
Subjt:  MDNQNDEVRLREAQQGVIAQIISSMEALTDRLDRLEIENRARERMPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGHGRTYQN

Query:  IQRRA
        IQRRA
Subjt:  IQRRA

A0A5A7TYI0 Uncharacterized protein1.1e-2883.75Show/hide
Query:  MEALTDRLDRLEIENRARERMPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGHGRTYQNIQRR
        MEALTDRL+RLEIENRARERMPPPLA  + IN N+NQYEGDG D LDDDQVTLL EPRRVGHGVVR RGHG+ YQNIQRR
Subjt:  MEALTDRLDRLEIENRARERMPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGHGRTYQNIQRR

A0A5D3CHG3 Retrotrans_gag domain-containing protein1.2e-3083.53Show/hide
Query:  IISSMEALTDRLDRLEIENRARERMPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGHGRTYQNIQRRA
        +IS+MEALTDRL+R EIENRARERMPPPLA  ++IN NDNQ EGDGSD LDDDQVTLLGEPRRVGHGVVR RG GR YQNIQRRA
Subjt:  IISSMEALTDRLDRLEIENRARERMPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGHGRTYQNIQRRA

A0A6J1DWE9 LOW QUALITY PROTEIN: uncharacterized protein LOC1110241156.4e-1649.5Show/hide
Query:  EVRLREAQQGVIAQIISSMEALTDRLDRLEIENRARERMPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPR----RVGHGVVRGRGHGRTYQNIQ
        + R REA +G + ++I SMEALT+R+ RLE +N+A  R+PPP    V+   ++++YEGDGSD  +DDQ T+L  PR     VG G+ RGRG GR Y N Q
Subjt:  EVRLREAQQGVIAQIISSMEALTDRLDRLEIENRARERMPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPR----RVGHGVVRGRGHGRTYQNIQ

Query:  R
        R
Subjt:  R

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTCAGCTTCGAAATGTCAACAAACATCAATTAGTTGGAAAGGCCAATGGTTCACGGATGGACAATCAAAATGATGAAGTACGATTAAGAGAGGCACAACAAGG
AGTTATTGCACAAATAATTAGTAGTATGGAAGCATTGACAGATCGTTTGGATAGGTTGGAGATTGAAAATCGGGCAAGAGAAAGAATGCCACCTCCTTTAGCACAGCATG
TGGTAATTAACCGTAATGACAACCAATATGAGGGTGATGGTTCTGATGGTTTAGACGATGACCAAGTTACATTACTTGGGGAGCCAAGACGTGTGGGACATGGAGTAGTT
AGAGGAAGAGGTCATGGAAGAACTTATCAAAACATCCAAAGGAGAGCTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTCTCAGCTTCGAAATGTCAACAAACATCAATTAGTTGGAAAGGCCAATGGTTCACGGATGGACAATCAAAATGATGAAGTACGATTAAGAGAGGCACAACAAGG
AGTTATTGCACAAATAATTAGTAGTATGGAAGCATTGACAGATCGTTTGGATAGGTTGGAGATTGAAAATCGGGCAAGAGAAAGAATGCCACCTCCTTTAGCACAGCATG
TGGTAATTAACCGTAATGACAACCAATATGAGGGTGATGGTTCTGATGGTTTAGACGATGACCAAGTTACATTACTTGGGGAGCCAAGACGTGTGGGACATGGAGTAGTT
AGAGGAAGAGGTCATGGAAGAACTTATCAAAACATCCAAAGGAGAGCTTAA
Protein sequenceShow/hide protein sequence
MASQLRNVNKHQLVGKANGSRMDNQNDEVRLREAQQGVIAQIISSMEALTDRLDRLEIENRARERMPPPLAQHVVINRNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVV
RGRGHGRTYQNIQRRA