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PI0001591 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001591
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTransposon Ty3-G Gag-Pol polyprotein
Genome locationchr10:12351627..12351893
RNA-Seq ExpressionPI0001591
SyntenyPI0001591
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047821.1 uncharacterized protein E6C27_scaffold133G00730 [Cucumis melo var. makuwa]6.8e-1962.5Show/hide
Query:  MRFNDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEE-FNFEFSKGVLKEVNVVSDVRKFEPLDLQTK
        M+ NDQ++ FNV + +KFP DA+NYN I+ LGWDYCEE + AKLFS EE F  E  + +L+EVNVVSD RK +PLDLQTK
Subjt:  MRFNDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEE-FNFEFSKGVLKEVNVVSDVRKFEPLDLQTK

KAA0054122.1 uncharacterized protein E6C27_scaffold131G00340 [Cucumis melo var. makuwa]2.9e-1758.43Show/hide
Query:  MRFNDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEE-FNFEFSKGVLKEVNVVSDVRKFEPLDLQTKGEKKIKPSI
        M FND+EIKFN +  +KFP +   YNAIESLGWDYC+E    +LFS EE F  E    +L+EVNV+    KFE LDL+TKG+KKIK SI
Subjt:  MRFNDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEE-FNFEFSKGVLKEVNVVSDVRKFEPLDLQTKGEKKIKPSI

KAA0054794.1 hypothetical protein E6C27_scaffold437G00790 [Cucumis melo var. makuwa]3.2e-1657.3Show/hide
Query:  MRFNDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEE-FNFEFSKGVLKEVNVVSDVRKFEPLDLQTKGEKKIKPSI
        M FND+E+KFNV + + F  D ENY+ IESLGWDY EE    KL S E  F  E    +L+E+N+V   RKFE LDLQTKGEKK  PSI
Subjt:  MRFNDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEE-FNFEFSKGVLKEVNVVSDVRKFEPLDLQTKGEKKIKPSI

KAA0066655.1 uncharacterized protein E6C27_scaffold979G00870 [Cucumis melo var. makuwa]1.2e-1860.67Show/hide
Query:  MRFNDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEEFNFEFSKG-VLKEVNVVSDVRKFEPLDLQTKGEKKIKPSI
        M FND+EIKFN+ +V+KFP D EN +AIES  WDYCEE    +LFS  EF  E     +L+EVN VSD  KFE LDLQTK EKK K SI
Subjt:  MRFNDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEEFNFEFSKG-VLKEVNVVSDVRKFEPLDLQTKGEKKIKPSI

TYK22208.1 uncharacterized protein E5676_scaffold333G00860 [Cucumis melo var. makuwa]1.1e-1654.12Show/hide
Query:  NDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEEFNFEFSKGVLKEVNVVSDVRKFEPLDLQTKGEKKIKPSI
        N +E+KFNV + LKFP++ ENYN IESL W             P+EF+ +  +G+++EV VVSD RK EPLDLQTKG KK KPSI
Subjt:  NDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEEFNFEFSKGVLKEVNVVSDVRKFEPLDLQTKGEKKIKPSI

TrEMBL top hitse value%identityAlignment
A0A5A7U2P4 Integrase catalytic domain-containing protein3.3e-1962.5Show/hide
Query:  MRFNDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEE-FNFEFSKGVLKEVNVVSDVRKFEPLDLQTK
        M+ NDQ++ FNV + +KFP DA+NYN I+ LGWDYCEE + AKLFS EE F  E  + +L+EVNVVSD RK +PLDLQTK
Subjt:  MRFNDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEE-FNFEFSKGVLKEVNVVSDVRKFEPLDLQTK

A0A5A7UE99 Uncharacterized protein1.4e-1758.43Show/hide
Query:  MRFNDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEE-FNFEFSKGVLKEVNVVSDVRKFEPLDLQTKGEKKIKPSI
        M FND+EIKFN +  +KFP +   YNAIESLGWDYC+E    +LFS EE F  E    +L+EVNV+    KFE LDL+TKG+KKIK SI
Subjt:  MRFNDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEE-FNFEFSKGVLKEVNVVSDVRKFEPLDLQTKGEKKIKPSI

A0A5D3BLQ8 Uncharacterized protein1.5e-1657.3Show/hide
Query:  MRFNDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEE-FNFEFSKGVLKEVNVVSDVRKFEPLDLQTKGEKKIKPSI
        M FND+E+KFNV + + F  D ENY+ IESLGWDY EE    KL S E  F  E    +L+E+N+V   RKFE LDLQTKGEKK  PSI
Subjt:  MRFNDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEE-FNFEFSKGVLKEVNVVSDVRKFEPLDLQTKGEKKIKPSI

A0A5D3BYK3 Uncharacterized protein5.6e-1960.67Show/hide
Query:  MRFNDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEEFNFEFSKG-VLKEVNVVSDVRKFEPLDLQTKGEKKIKPSI
        M FND+EIKFN+ +V+KFP D EN +AIES  WDYCEE    +LFS  EF  E     +L+EVN VSD  KFE LDLQTK EKK K SI
Subjt:  MRFNDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEEFNFEFSKG-VLKEVNVVSDVRKFEPLDLQTKGEKKIKPSI

A0A5D3DFH0 Uncharacterized protein5.3e-1754.12Show/hide
Query:  NDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEEFNFEFSKGVLKEVNVVSDVRKFEPLDLQTKGEKKIKPSI
        N +E+KFNV + LKFP++ ENYN IESL W             P+EF+ +  +G+++EV VVSD RK EPLDLQTKG KK KPSI
Subjt:  NDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEEFNFEFSKGVLKEVNVVSDVRKFEPLDLQTKGEKKIKPSI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCGGTTCAATGATCAGGAAATCAAGTTCAATGTCTTTGACGTGTTGAAATTCCCCGAGGATGCTGAAAACTACAATGCCATTGAATCCCTTGGATGGGATTATTGCGA
GGAAAATTTGATTGCCAAATTGTTCAGCCCTGAAGAATTCAATTTTGAGTTTTCCAAAGGCGTTCTAAAAGAAGTAAACGTCGTGTCTGACGTGAGGAAGTTTGAACCTT
TAGATCTGCAAACCAAAGGTGAGAAGAAAATAAAACCATCAATATAG
mRNA sequenceShow/hide mRNA sequence
ATGCGGTTCAATGATCAGGAAATCAAGTTCAATGTCTTTGACGTGTTGAAATTCCCCGAGGATGCTGAAAACTACAATGCCATTGAATCCCTTGGATGGGATTATTGCGA
GGAAAATTTGATTGCCAAATTGTTCAGCCCTGAAGAATTCAATTTTGAGTTTTCCAAAGGCGTTCTAAAAGAAGTAAACGTCGTGTCTGACGTGAGGAAGTTTGAACCTT
TAGATCTGCAAACCAAAGGTGAGAAGAAAATAAAACCATCAATATAG
Protein sequenceShow/hide protein sequence
MRFNDQEIKFNVFDVLKFPEDAENYNAIESLGWDYCEENLIAKLFSPEEFNFEFSKGVLKEVNVVSDVRKFEPLDLQTKGEKKIKPSI