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PI0001611 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001611
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag-pro-like protein
Genome locationchr11:26613618..26614103
RNA-Seq ExpressionPI0001611
SyntenyPI0001611
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006310 - DNA recombination (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090502 - RNA phosphodiester bond hydrolysis, endonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0030430 - host cell cytoplasm (cellular component)
GO:0003723 - RNA binding (molecular function)
GO:0003887 - DNA-directed DNA polymerase activity (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004523 - RNA-DNA hybrid ribonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0036933.1 uncharacterized protein E6C27_scaffold86G00060 [Cucumis melo var. makuwa]1.6e-5872.05Show/hide
Query:  MIEEAIDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGIS
        M+E  +DEV+KPH+ K+EVMTTR+M  G  SLN++LE LLK+ SN+GRFGLGYKPS+YDKIRLQE+KKKKRL K +M+EFDP +K IP LYDTFKSAGIS
Subjt:  MIEEAIDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGIS

Query:  YSSHDSNSKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE
        YSS +S+ KD LL KMESL +AAVA E SFEG+TVYACPPDFELN  D VDLPTFSR+FQ+
Subjt:  YSSHDSNSKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE

KAA0036947.1 uncharacterized protein E6C27_scaffold86G00270 [Cucumis melo var. makuwa]3.2e-5973.29Show/hide
Query:  MIEEAIDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGIS
        M+E  +DEV+KPH+ K+EVMTTR+M  G  SLN++LE LLK+ SN+GRFGLGYKPS+YDKIRLQEEKKKKRLAK +M+EFDP +K IP LYDTFKSAGIS
Subjt:  MIEEAIDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGIS

Query:  YSSHDSNSKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE
        YSS +S+ KD LL KMESL +A VA E SFEG+TVYACPPDFELN  D VDLPTFSR+FQE
Subjt:  YSSHDSNSKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE

KAA0055607.1 Gag-pro-like protein [Cucumis melo var. makuwa]3.2e-5976.62Show/hide
Query:  EVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGISYSSHDSN
        EV+KPH+ K+EVMTTR+M  G  SLNQ+LE LLK  SN+GRFGLGYKPS+YDKIRLQEEKKKKRLAK +M+EFDP +KFIP LYD FKSAGISYSSH+S+
Subjt:  EVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGISYSSHDSN

Query:  SKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE
         KD LL KMESL +AAVA +TSFEG+TVYACPPDFELN  D VDLPTFSR+FQE
Subjt:  SKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE

KAA0063218.1 Gag-pro-like protein [Cucumis melo var. makuwa]7.2e-5974.53Show/hide
Query:  MIEEAIDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGIS
        +I  A+DEV KPHR K+E+MTTR+M++G  SLNQ+L+ LLK  SN+GRFGLGYKPS+YDKIRLQEE KKKRLAK +M++FDP LKFIP LYDTFKSA IS
Subjt:  MIEEAIDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGIS

Query:  YSSHDSNSKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE
        YSS++S+ KD LL KMESLL+AAVA E SFEG+ VYACPPDFELN  DIVDLPTFSREFQE
Subjt:  YSSHDSNSKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE

TYK21788.1 uncharacterized protein E5676_scaffold1721G00440 [Cucumis melo var. makuwa]1.6e-5872.05Show/hide
Query:  MIEEAIDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGIS
        M+E  +DEV+KPH+ K+EVMTTR+M  G  SLN++LE LLK+ SN+GRFGLGYKPS+YDKIRLQE+KKKKRLAK +M+EFDP +K IP LYD FKSAGIS
Subjt:  MIEEAIDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGIS

Query:  YSSHDSNSKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE
        YSSH+S+ KD LL KM SL +AAVA E SFEG+TVYACPPDFELN  D VDLPTFSR+FQ+
Subjt:  YSSHDSNSKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE

TrEMBL top hitse value%identityAlignment
A0A5A7T1W2 Retrotrans_gag domain-containing protein7.8e-5972.05Show/hide
Query:  MIEEAIDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGIS
        M+E  +DEV+KPH+ K+EVMTTR+M  G  SLN++LE LLK+ SN+GRFGLGYKPS+YDKIRLQE+KKKKRL K +M+EFDP +K IP LYDTFKSAGIS
Subjt:  MIEEAIDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGIS

Query:  YSSHDSNSKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE
        YSS +S+ KD LL KMESL +AAVA E SFEG+TVYACPPDFELN  D VDLPTFSR+FQ+
Subjt:  YSSHDSNSKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE

A0A5A7T5W2 Retrotrans_gag domain-containing protein1.6e-5973.29Show/hide
Query:  MIEEAIDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGIS
        M+E  +DEV+KPH+ K+EVMTTR+M  G  SLN++LE LLK+ SN+GRFGLGYKPS+YDKIRLQEEKKKKRLAK +M+EFDP +K IP LYDTFKSAGIS
Subjt:  MIEEAIDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGIS

Query:  YSSHDSNSKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE
        YSS +S+ KD LL KMESL +A VA E SFEG+TVYACPPDFELN  D VDLPTFSR+FQE
Subjt:  YSSHDSNSKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE

A0A5A7UM01 Gag-pro-like protein1.6e-5976.62Show/hide
Query:  EVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGISYSSHDSN
        EV+KPH+ K+EVMTTR+M  G  SLNQ+LE LLK  SN+GRFGLGYKPS+YDKIRLQEEKKKKRLAK +M+EFDP +KFIP LYD FKSAGISYSSH+S+
Subjt:  EVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGISYSSHDSN

Query:  SKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE
         KD LL KMESL +AAVA +TSFEG+TVYACPPDFELN  D VDLPTFSR+FQE
Subjt:  SKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE

A0A5A7V6I2 Gag-pro-like protein3.5e-5974.53Show/hide
Query:  MIEEAIDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGIS
        +I  A+DEV KPHR K+E+MTTR+M++G  SLNQ+L+ LLK  SN+GRFGLGYKPS+YDKIRLQEE KKKRLAK +M++FDP LKFIP LYDTFKSA IS
Subjt:  MIEEAIDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGIS

Query:  YSSHDSNSKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE
        YSS++S+ KD LL KMESLL+AAVA E SFEG+ VYACPPDFELN  DIVDLPTFSREFQE
Subjt:  YSSHDSNSKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE

A0A5D3DEB3 Retrotrans_gag domain-containing protein7.8e-5972.05Show/hide
Query:  MIEEAIDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGIS
        M+E  +DEV+KPH+ K+EVMTTR+M  G  SLN++LE LLK+ SN+GRFGLGYKPS+YDKIRLQE+KKKKRLAK +M+EFDP +K IP LYD FKSAGIS
Subjt:  MIEEAIDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGIS

Query:  YSSHDSNSKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE
        YSSH+S+ KD LL KM SL +AAVA E SFEG+TVYACPPDFELN  D VDLPTFSR+FQ+
Subjt:  YSSHDSNSKDCLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATAGAGGAGGCTATAGATGAAGTGGTAAAGCCACACAGGCCTAAAATTGAAGTGATGACCACTAGGATGATGAAAGACGGAAGACCTTCTTTGAATCAAAGCTTAGA
GTTGCTTTTAAAAATGTCAAGCAACGAAGGGAGATTTGGTTTGGGCTATAAGCCATCCGTATATGACAAGATTAGGCTTCAAGAAGAAAAGAAAAAAAAGCGTTTGGCAA
AGCAAGATATGAAGGAGTTTGATCCGGGTCTAAAATTTATACCAGCGCTGTACGATACTTTCAAGAGTGCTGGTATAAGTTACTCATCACATGACTCTAATTCGAAGGAT
TGTCTGTTAATGAAGATGGAGAGTTTATTGATTGCAGCGGTGGCACCTGAAACATCATTTGAAGGCGACACAGTTTATGCCTGTCCACCTGATTTCGAGCTTAACAAATT
GGATATTGTAGATCTACCTACATTTTCAAGAGAATTTCAAGAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGATAGAGGAGGCTATAGATGAAGTGGTAAAGCCACACAGGCCTAAAATTGAAGTGATGACCACTAGGATGATGAAAGACGGAAGACCTTCTTTGAATCAAAGCTTAGA
GTTGCTTTTAAAAATGTCAAGCAACGAAGGGAGATTTGGTTTGGGCTATAAGCCATCCGTATATGACAAGATTAGGCTTCAAGAAGAAAAGAAAAAAAAGCGTTTGGCAA
AGCAAGATATGAAGGAGTTTGATCCGGGTCTAAAATTTATACCAGCGCTGTACGATACTTTCAAGAGTGCTGGTATAAGTTACTCATCACATGACTCTAATTCGAAGGAT
TGTCTGTTAATGAAGATGGAGAGTTTATTGATTGCAGCGGTGGCACCTGAAACATCATTTGAAGGCGACACAGTTTATGCCTGTCCACCTGATTTCGAGCTTAACAAATT
GGATATTGTAGATCTACCTACATTTTCAAGAGAATTTCAAGAGTAA
Protein sequenceShow/hide protein sequence
MIEEAIDEVVKPHRPKIEVMTTRMMKDGRPSLNQSLELLLKMSSNEGRFGLGYKPSVYDKIRLQEEKKKKRLAKQDMKEFDPGLKFIPALYDTFKSAGISYSSHDSNSKD
CLLMKMESLLIAAVAPETSFEGDTVYACPPDFELNKLDIVDLPTFSREFQE