CuGenDBv2

Gene ID	PI0001613
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	tRNA_int_end_N2 domain-containing protein
Genome location	chr04:8101535..8104004
RNA-Seq Expression	PI0001613
Synteny	PI0001613
Gene Ontology terms	GO:0000379 - tRNA-type intron splice site recognition and cleavage (biological process) GO:0006913 - nucleocytoplasmic transport (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0000214 - tRNA-intron endonuclease complex (cellular component) GO:0005643 - nuclear pore (cellular component) GO:0004519 - endonuclease activity (molecular function) GO:0017056 - structural constituent of nuclear pore (molecular function)
InterPro domains	IPR024336 - tRNA-splicing endonuclease, subunit Sen54, N-terminal IPR024337 - tRNA-splicing endonuclease, subunit Sen54

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6596967.1 Chromatin assembly factor 1 subunit FAS1, partial [Cucurbita argyrosperma subsp. sororia]

2.2e-115

78.49

Show/hide

Query:  MEATDWESSSGGASGDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLFDH
        MEATDWE SSGGAS DDDN+EQDIK+EEECL +SG +RKLQFRKHASTARWND MGMAEV+ENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGAL L DH
Subjt:  MEATDWESSSGGASGDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLFDH

Query:  DNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVFLP
        DN SLSLKDVYKKVAEGKS C+WEQFEVYRHLKSLG+IVGKHKVPWS+K   N  D+S  SSIENKG+    SEDE+ I EL+DA QL+EVTPIFDV+LP
Subjt:  DNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVFLP

Query:  HNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP
        H+KFRKSSPGDPNFMVCLT              R S GIPMKYCHVEHGRVCFFSFD VELP+LP
Subjt:  HNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP

KAG7028441.1 tRNA-splicing endonuclease subunit Sen54 [Cucurbita argyrosperma subsp. argyrosperma]

2.2e-115

78.49

Show/hide

Query:  MEATDWESSSGGASGDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLFDH
        MEATDWE SSGGAS DDDN+EQDIK+EEECL +SG +RKLQFRKHASTARWND MGMAEV+ENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGAL L DH
Subjt:  MEATDWESSSGGASGDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLFDH

Query:  DNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVFLP
        DN SLSLKDVYKKVAEGKS C+WEQFEVYRHLKSLG+IVGKHKVPWS+K   N  D+S  SSIENKG+    SEDE+ I EL+DA QL+EVTPIFDV+LP
Subjt:  DNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVFLP

Query:  HNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP
        H+KFRKSSPGDPNFMVCLT              R S GIPMKYCHVEHGRVCFFSFD VELP+LP
Subjt:  HNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP

XP_011653726.1 uncharacterized protein LOC101210680 isoform X2 [Cucumis sativus]

8.0e-118

81.27

Show/hide

Query:  MEATDWESSSGGAS--GDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLF
        MEAT+WESSSGGAS  GD+DNYEQDI DEEECL ASG LRKLQFRKHASTARWND+MGMAEV+ENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGAL L 
Subjt:  MEATDWESSSGGAS--GDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLF

Query:  DHDNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVF
        DHDN SLSLKDVYKKVAEG+SG LWEQFEVYRHLKSLG+IVGKH+VPWSLK+V N  D+S PSS ENKGA    S+DE+ I  LL+A QLDEVTPIFDVF
Subjt:  DHDNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVF

Query:  LPHNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP
        LPHNKFRKSSPGDPNFMVCLT              RTSRGIPMKYCHVEHGRVCFFSFD VELP+LP
Subjt:  LPHNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP

XP_022156818.1 uncharacterized protein LOC111023660 [Momordica charantia]

1.4e-117

79.62

Show/hide

Query:  MEATDWESSSGGASGDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLFDH
        MEATDWESSSGGASGDD+ YEQD++DEEECL ASG +RKLQFRKHASTARWND+MGMAEV+EN+GSLWTTTGIVRCGKIYCS EETLFL+EVGAL L DH
Subjt:  MEATDWESSSGGASGDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLFDH

Query:  DNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVFLP
        DN SLSLKDVYKKVAEGK+GCLWEQFEVYRHLKSLGFIVGKHKVPWS+K V N SD+SP SSIEN+GA    S+DER ISELL + QLD+V PIFDVFLP
Subjt:  DNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVFLP

Query:  HNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP
        H+KFRKSSPGDPNFMVCLT              RTSRGI +KYCHVEHGRVCFFSFD +ELP+LP
Subjt:  HNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP

XP_038883355.1 uncharacterized protein LOC120074337 [Benincasa hispida]

9.2e-122

83.4

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Query:  MEATDWESSSGGASGDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLFDH
        MEA DWESSSGGASGD+DNYE+DI +EEECL ASGYLRKLQFRKHASTARWNDRMGMAEV+ENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGAL L DH
Subjt:  MEATDWESSSGGASGDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLFDH

Query:  DNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVFLP
        DN SLSL+DVYKK+AEGK+GCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSV + S++S PSSIENKGA    SEDER ISELLD  QL+EV PIFDVFLP
Subjt:  DNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVFLP

Query:  HNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP
        HNKFRKSSPGDPNFMV LT              RTSRGIPMKYCHVEHGRVCFFSFD VELPILP
Subjt:  HNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP

TrEMBL top hits

e value

%identity

Alignment

A0A0A0KXV5 tRNA_int_end_N2 domain-containing protein

3.9e-118

81.27

Show/hide

Query:  MEATDWESSSGGAS--GDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLF
        MEAT+WESSSGGAS  GD+DNYEQDI DEEECL ASG LRKLQFRKHASTARWND+MGMAEV+ENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGAL L 
Subjt:  MEATDWESSSGGAS--GDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLF

Query:  DHDNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVF
        DHDN SLSLKDVYKKVAEG+SG LWEQFEVYRHLKSLG+IVGKH+VPWSLK+V N  D+S PSS ENKGA    S+DE+ I  LL+A QLDEVTPIFDVF
Subjt:  DHDNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVF

Query:  LPHNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP
        LPHNKFRKSSPGDPNFMVCLT              RTSRGIPMKYCHVEHGRVCFFSFD VELP+LP
Subjt:  LPHNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP

A0A6J1DRN3 uncharacterized protein LOC111023660

6.6e-118

79.62

Show/hide

Query:  MEATDWESSSGGASGDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLFDH
        MEATDWESSSGGASGDD+ YEQD++DEEECL ASG +RKLQFRKHASTARWND+MGMAEV+EN+GSLWTTTGIVRCGKIYCS EETLFL+EVGAL L DH
Subjt:  MEATDWESSSGGASGDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLFDH

Query:  DNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVFLP
        DN SLSLKDVYKKVAEGK+GCLWEQFEVYRHLKSLGFIVGKHKVPWS+K V N SD+SP SSIEN+GA    S+DER ISELL + QLD+V PIFDVFLP
Subjt:  DNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVFLP

Query:  HNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP
        H+KFRKSSPGDPNFMVCLT              RTSRGI +KYCHVEHGRVCFFSFD +ELP+LP
Subjt:  HNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP

A0A6J1FKK4 tRNA-splicing endonuclease subunit Sen54

1.1e-115

78.49

Show/hide

Query:  MEATDWESSSGGASGDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLFDH
        MEATDWE SSGGAS DDDN+EQDIK+EEECL +SG +RKLQFRKHASTARWND MGMAEV+ENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGAL L DH
Subjt:  MEATDWESSSGGASGDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLFDH

Query:  DNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVFLP
        DN SLSLKDVYKKVAEGKS C+WEQFEVYRHLKSLG+IVGKHKVPWS+K   N  D+S  SSIENKG+    SEDE+ I EL+DA QL+EVTPIFDV+LP
Subjt:  DNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVFLP

Query:  HNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP
        H+KFRKSSPGDPNFMVCLT              R S GIPMKYCHVEHGRVCFFSFD VELP+LP
Subjt:  HNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP

A0A6J1I8D9 tRNA-splicing endonuclease subunit Sen54 isoform X3

2.0e-114

77.74

Show/hide

Query:  MEATDWESSSGGASGDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLFDH
        MEATDWE SSGGAS DDDN+EQDIK+EEECL +SG +RKLQFRKHASTARWND MGMAEV+ENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGAL L DH
Subjt:  MEATDWESSSGGASGDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLFDH

Query:  DNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVFLP
        DN SLSLKDVYKKVAEGKS C+WEQFEVYRHLKSLG+IVGKHKVPWS+K   N  D+S  SSIENKG+    SEDE+ I ELL+A QL+E+TPIFDV+LP
Subjt:  DNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVFLP

Query:  HNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP
        H+KFRKSSPGDPNFMVCLT              R S GIPMKYCHVEHGRVCFFSFD V+LP+LP
Subjt:  HNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP

A0A6J1ICR8 tRNA-splicing endonuclease subunit Sen54 isoform X2

2.0e-114

77.74

Show/hide

Query:  MEATDWESSSGGASGDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLFDH
        MEATDWE SSGGAS DDDN+EQDIK+EEECL +SG +RKLQFRKHASTARWND MGMAEV+ENKGSLWTT+GIVRCGKIYCSIEETLFLIEVGAL L DH
Subjt:  MEATDWESSSGGASGDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLFDH

Query:  DNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVFLP
        DN SLSLKDVYKKVAEGKS C+WEQFEVYRHLKSLG+IVGKHKVPWS+K   N  D+S  SSIENKG+    SEDE+ I ELL+A QL+E+TPIFDV+LP
Subjt:  DNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGA----SEDERLISELLDATQLDEVTPIFDVFLP

Query:  HNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP
        H+KFRKSSPGDPNFMVCLT              R S GIPMKYCHVEHGRVCFFSFD V+LP+LP
Subjt:  HNKFRKSSPGDPNFMVCLT--------------RTSRGIPMKYCHVEHGRVCFFSFDNVELPILP

SwissProt top hits

e value

%identity

Alignment

O74908 Probable tRNA-splicing endonuclease subunit sen54

1.0e-06

34.62

Show/hide

Query:  LRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRC-GKIYCSIEETLFLIEVGALRLFDHDNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSL
        + +L   KHA  A WN + GM+ V +  G L+ T G      +++   EETL+L+E G++  +  + L +SL+ VY   +    G L E + VY HL+  
Subjt:  LRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRC-GKIYCSIEETLFLIEVGALRLFDHDNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSL

Query:  GFIV
        GF V
Subjt:  GFIV

Q74ZJ5 tRNA-splicing endonuclease subunit SEN54

2.5e-05

30.39

Show/hide

Query:  ARWNDRMGMAEVVENKGSLWTTTGIV-RCGKIYCSIEETLFLIEVGALRLF----------DHDNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGF
        A W +   MA +   +GS   T G V + G+ +  + E ++L+E G +  +          +H+++ LS++DVY   +  +     ++F VY HLK LGF
Subjt:  ARWNDRMGMAEVVENKGSLWTTTGIV-RCGKIYCSIEETLFLIEVGALRLF----------DHDNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGF

Query:  IV
        IV
Subjt:  IV

Arabidopsis top hits

e value

%identity

Alignment

AT3G02370.1 unknown protein

5.9e-42

47.5

Show/hide

Query:  MAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLF-DHDNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCS
        MAEV   +G LWTTTGI+R GK YC IEE L+L E+G L+L  D D++ +SLKD+Y ++AEGK GC WE +EVYR+LK LG+I+G+H VPW+ K   N +
Subjt:  MAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLF-DHDNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCS

Query:  DVSPPSSIENKGASEDERLISELLDATQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLT
              S+      +D   +++LL    + +  P+FDV+LP+++F+KSSPG+P+F+ C +
Subjt:  DVSPPSSIENKGASEDERLISELLDATQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLT

AT3G02370.2 unknown protein

3.4e-42

47.24

Show/hide

Query:  MAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLF-DHDNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCS
        MAEV   +G LWTTTGI+R GK YC IEE L+L E+G L+L  D D++ +SLKD+Y ++AEGK GC WE +EVYR+LK LG+I+G+H VPW+ K   N +
Subjt:  MAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLF-DHDNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCS

Query:  DVSPPSSIENKGASEDERLISELLDATQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRTS
              S+      +D   +++LL    + +  P+FDV+LP+++F+KSSPG+P+F+ C +  S
Subjt:  DVSPPSSIENKGASEDERLISELLDATQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRTS

AT3G57360.1 unknown protein

9.3e-56

42.05

Show/hide

Query:  MEATDWESSSGGASGDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLF-D
        ME  DWE+SS  +S ++  +  D  D+EE   + G + KLQFR  +S ARW   +GMAEV   +G LWTTTGI+R GK YC IEE L+L E+G L++  +
Subjt:  MEATDWESSSGGASGDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLF-D

Query:  HDNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGAS----EDERLISELLDATQLDEVTPIFDVFL
         D++ + LKD+Y+K+AE KSGC WE +EVYR+LK LG+I+G+H V W+LK      D + P+  E    +     D   +++LL   Q+ +   +FDV+L
Subjt:  HDNLSLSLKDVYKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGAS----EDERLISELLDATQLDEVTPIFDVFL

Query:  PHNKFRKSSPGDPNFMVCLTRTSR-------------GIPMKYCHVEHGRVCFFSFDNVELPIL
        P+++F+KSSPG+P+F+ C +  S                P+ +CH+  GR  FFSF +++LP+L
Subjt:  PHNKFRKSSPGDPNFMVCLTRTSR-------------GIPMKYCHVEHGRVCFFSFDNVELPIL

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGAGGCTACAGATTGGGAAAGCTCATCAGGAGGAGCTAGTGGTGATGACGACAATTACGAGCAAGACATAAAAGATGAAGAAGAATGTCTCCTCGCATCTGGGTACTT
GCGCAAGCTGCAATTTAGGAAGCATGCTTCAACTGCTCGATGGAATGATCGAATGGGAATGGCAGAAGTTGTAGAGAACAAAGGCAGCCTTTGGACGACGACTGGCATTG
TCCGTTGTGGCAAGATTTATTGTTCCATTGAGGAAACTTTATTTCTTATTGAAGTTGGGGCCTTACGTCTTTTTGATCATGATAATTTAAGTCTCTCTTTGAAAGATGTA
TATAAGAAGGTAGCTGAAGGTAAAAGTGGGTGTCTTTGGGAGCAGTTTGAGGTTTATAGGCACCTCAAATCTCTTGGTTTCATTGTTGGAAAGCATAAAGTTCCTTGGTC
TCTGAAGAGTGTTGGGAATTGCAGTGACGTTTCACCTCCAAGTTCTATTGAAAACAAAGGAGCATCAGAAGATGAGAGGTTGATCTCTGAACTATTAGATGCCACTCAGC
TTGATGAAGTGACACCCATTTTTGATGTTTTTCTTCCACATAACAAATTTAGAAAGTCTTCTCCTGGTGACCCAAATTTTATGGTCTGCTTGACTAGAACATCCAGAGGC
ATTCCAATGAAATATTGTCATGTTGAACATGGACGTGTCTGTTTCTTTTCGTTTGATAATGTGGAGCTTCCCATCTTACCTTGA

mRNA sequence

Show/hide mRNA sequence

Protein sequence

Show/hide protein sequence

MEATDWESSSGGASGDDDNYEQDIKDEEECLLASGYLRKLQFRKHASTARWNDRMGMAEVVENKGSLWTTTGIVRCGKIYCSIEETLFLIEVGALRLFDHDNLSLSLKDV
YKKVAEGKSGCLWEQFEVYRHLKSLGFIVGKHKVPWSLKSVGNCSDVSPPSSIENKGASEDERLISELLDATQLDEVTPIFDVFLPHNKFRKSSPGDPNFMVCLTRTSRG
IPMKYCHVEHGRVCFFSFDNVELPILP

PI0001613 (gene) of Melon (PI 482460) v1 genome