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PI0001640 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001640
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCYSTM domain-containing protein
Genome locationchr07:20763859..20765306
RNA-Seq ExpressionPI0001640
SyntenyPI0001640
Gene Ontology termsGO:0005886 - plasma membrane (cellular component)
GO:0016021 - integral component of membrane (cellular component)
InterPro domainsIPR028144 - Cysteine-rich transmembrane CYSTM domain
IPR044850 - Cysteine-rich and transmembrane domain-containing protein WIH1/2-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0032928.1 extensin-like [Cucumis melo var. makuwa]2.2e-2398.28Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG
        MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQP PVPAETKSRGDGFWKG
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG

KAF3972548.1 hypothetical protein CMV_003960 [Castanea mollissima]6.0e-2176.71Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS++PA V YPPP ST P  Y APPPAGYPT+DG  +SQ  P P ETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

KAG6591814.1 hypothetical protein SDJN03_14160, partial [Cucurbita argyrosperma subsp. sororia]3.9e-2891.78Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS QPA V YPPP ST+PTSY+APPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

XP_022137938.1 cysteine-rich and transmembrane domain-containing protein WIH2-like [Momordica charantia]4.3e-2789.04Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPA V YPPP ST P SY+APPPAGYPTRDGGDFSQP PVPAETKSRGDGFWKGCCAA+CCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

XP_031739667.1 cysteine-rich and transmembrane domain-containing protein WIH1-like [Cucumis sativus]4.2e-3094.52Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTR+GGDFS   PVPAETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

TrEMBL top hitse value%identityAlignment
A0A0A0L4C6 CYSTM domain-containing protein2.0e-3094.52Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTR+GGDFS   PVPAETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

A0A5D3DX21 Extensin-like1.1e-2398.28Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG
        MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQP PVPAETKSRGDGFWKG
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKG

A0A6J1CBQ4 cysteine-rich and transmembrane domain-containing protein WIH2-like2.1e-2789.04Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSSAQPA V YPPP ST P SY+APPPAGYPTRDGGDFSQP PVPAETKSRGDGFWKGCCAA+CCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

A0A7N2LG73 CYSTM domain-containing protein6.5e-2175.34Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS++PA V YPPP ST P  Y APPPAGYPT+DG  +SQ  P P ETKSRGDGFWKGCCAALCCCCV+DACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

A0A7N2R3F7 CYSTM domain-containing protein5.0e-2176.71Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        MSS++PA V YPPP STVP  Y APPPAGYPT+DG  + Q  P P ETKSRGDGFWKGCCAALCCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

SwissProt top hitse value%identityAlignment
Q9FJW3 Cysteine-rich and transmembrane domain-containing protein WIH15.3e-0443.24Show/hide
Query:  PAGVNYPPPSSTVPTSYSAPPPAGYPTRD--GGDFSQPAPVP----AETKSRGDGFWKGCCAALCCCCVLDACF
        P    YPP     P  Y   PPAGYP      G  +Q  P P    A  + +  G  +GC AALCCCC+LDACF
Subjt:  PAGVNYPPPSSTVPTSYSAPPPAGYPTRD--GGDFSQPAPVP----AETKSRGDGFWKGCCAALCCCCVLDACF

Arabidopsis top hitse value%identityAlignment
AT1G05340.1 unknown protein5.4e-1257.97Show/hide
Query:  QPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        Q AG N PPP ST     S PPP GYPT      S  A    ETKS+GDGF+KGC AA+CCCC LD CF
Subjt:  QPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

AT2G32190.1 unknown protein1.3e-1358.33Show/hide
Query:  SSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        S  Q +G    PP ST P  Y  PPP GYPT    D S     P ETKS+GDGF KGC AA+CCCCVLDACF
Subjt:  SSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

AT2G32210.1 unknown protein8.4e-1358.33Show/hide
Query:  SSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        S  Q +G    PP ST P  Y APPP GYPT    D S       ETKS+GDGF KGC AA+CCCCVLDACF
Subjt:  SSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

AT3G22235.1 BEST Arabidopsis thaliana protein match is: pathogen and circadian controlled 1 (TAIR:AT3G22231.1)1.5e-0956.45Show/hide
Query:  PSSTVPTSYSAPPPAGYPTRDG--GDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        PS T    Y++PPP GYPTRD   GD   P     ET S+G    +GCCAA+CCCCVLDACF
Subjt:  PSSTVPTSYSAPPPAGYPTRDG--GDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF

AT3G22240.1 unknown protein1.1e-1556Show/hide
Query:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDG--GDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF
        M+ ++   ++   PS T    Y++PPP GYPTRD   GD   P     ETKS+GDGFWKGCCAA+CCCCVLDACF
Subjt:  MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDG--GDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTTCCGCTCAACCTGCAGGTGTTAATTATCCTCCACCGTCGTCCACCGTGCCAACCTCTTATTCAGCTCCTCCGCCGGCGGGGTATCCGACGAGAGACGGCGGAGA
CTTCTCTCAACCCGCCCCTGTTCCGGCTGAAACTAAGTCTAGAGGCGATGGCTTTTGGAAAGGCTGTTGTGCTGCATTGTGTTGCTGCTGTGTATTGGATGCATGCTTCT
AG
mRNA sequenceShow/hide mRNA sequence
AAAAGAAAAAGAAATATAAAAACAATAAACTCACTTTGTGCATAGTGTAAAAACTAAAAAGCACCTGCTCTCTTTTGTCTTCATATATTCTCCCTTCCTTTCACGCGGTT
TCGCCGCCCTTGGCCGGTCCCTCTCCGCCGCCTCCAAATCTCTCTCTCCCCCACATATTCTATATATATATATATATATATATCCAATCCCTCCTAAACCATCAAACTTA
ATTAAACCCCAAAATTTAAAACTATACATATATTATTTCTGATTTTTCTAATTTCTTCTCTTGCAAATTAAACATGAGTTCCGCTCAACCTGCAGGTGTTAATTATCCTC
CACCGTCGTCCACCGTGCCAACCTCTTATTCAGCTCCTCCGCCGGCGGGGTATCCGACGAGAGACGGCGGAGACTTCTCTCAACCCGCCCCTGTTCCGGCTGAAACTAAG
TCTAGAGGCGATGGCTTTTGGAAAGGCTGTTGTGCTGCATTGTGTTGCTGCTGTGTATTGGATGCATGCTTCTAGAGAGAGATTATGGATATAATTAATCAGCATAATTA
TTGTTGTTTTAGTGTTTTAATTTTAATTTGTGAATTTTTGGATTAATTATGTCATGATGTTGTAATAATAAATTTGGGTGTTTGAAATTTCATTCTGATGAAACTATTAT
TGGACTTCTGTGATCATATACCATATAGATATTTTAATTTAATTATATATTCTTTTTTGCGTGGA
Protein sequenceShow/hide protein sequence
MSSAQPAGVNYPPPSSTVPTSYSAPPPAGYPTRDGGDFSQPAPVPAETKSRGDGFWKGCCAALCCCCVLDACF