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PI0001658 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001658
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionChitin-binding type-1 domain-containing protein
Genome locationchr03:24581936..24582475
RNA-Seq ExpressionPI0001658
SyntenyPI0001658
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0026100.1 uncharacterized protein E6C27_scaffold19G00360 [Cucumis melo var. makuwa]1.2e-5161.88Show/hide
Query:  MPILRGYKLEEHLIEESKCPDKYIPASSARES--HSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEAT
        +PIL+GYKLE HL  E+ CP  ++ ++S+  +     G DAT   +SS   R+   VN  FE+WVTTDLLLLGWLYNSM P+V +QLMGF+N +DLW+AT
Subjt:  MPILRGYKLEEHLIEESKCPDKYIPASSARES--HSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEAT

Query:  QDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNPVIAVIQGKSDIS
        QD FGVQSRAEEDFLRQM QTTRKG+ KMEEYL  MK+  D+L Q G+ V  R+L+SQ LLGLDE YN VI VIQGK DIS
Subjt:  QDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNPVIAVIQGKSDIS

KAA0060208.1 Integrase, catalytic core [Cucumis melo var. makuwa]9.8e-4161.84Show/hide
Query:  ESKCPDKYIPASSARESHSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLRQ
        E+ CP K+I  +   ES S G    TDGA SS+    +TVNP F++WVT+DLLLLGW+YNSM  EV  QLMGF+ AKDL EA QDLFGVQSR EEDFLR 
Subjt:  ESKCPDKYIPASSARESHSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLRQ

Query:  MFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNP
         FQTTRKG+ KME+YL+ MK+ A++L Q G+ +  RSL+SQ LLGLDE YNP
Subjt:  MFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNP

TYJ96311.1 uncharacterized protein E5676_scaffold1970G00140 [Cucumis melo var. makuwa]1.8e-4259.75Show/hide
Query:  MPILRGYKLEEHLIEESKCPDKYIPASSARES--HSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEAT
        +PIL+GYKLE HL  E+ CP  ++ ++S+  +     G DAT   +SS   R+   VN  FE+WVTTDLLLLGWLYNSM P+V +QLMGF+N +DLW+AT
Subjt:  MPILRGYKLEEHLIEESKCPDKYIPASSARES--HSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEAT

Query:  QDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQT
        QD FGVQSRAEEDFLRQM QTTRKG+ KMEEYL  MK+  D+L Q G+ V  R+L+SQT
Subjt:  QDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQT

XP_022148963.1 uncharacterized protein LOC111017501 [Momordica charantia]1.5e-4165.93Show/hide
Query:  SSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQT
        SSS       +NP +E WVTTD LLLGWLYNSM PEV  Q+MG+ NA DLW A Q+LFGVQS+AEED+LRQ+FQ TRKGS+KM ++L+ MKS+AD+L Q 
Subjt:  SSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQT

Query:  GNSVSTRSLVSQTLLGLDETYNPVIAVIQGKSDIS
        G+ V TRSL+SQ LLGLDE YNPV+A IQGK  IS
Subjt:  GNSVSTRSLVSQTLLGLDETYNPVIAVIQGKSDIS

XP_022151683.1 uncharacterized protein LOC111019598 [Momordica charantia]1.2e-4150.84Show/hide
Query:  MPILRGYKLEEHLIEESKCPDKYIPASSARESHSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQD
        +PILR YKL ++L  +  CP           +H   TD  T+   S+  +   T+NP +E W+  D LLLGWLYNSM  +V +Q+MGFS +++LW A Q+
Subjt:  MPILRGYKLEEHLIEESKCPDKYIPASSARESHSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQD

Query:  LFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNPVIAVIQGKSDIS
        LFGVQSRAE D+L+Q+FQ T KGS++M EYLK MKS+AD+L+  G+SVS R LVSQ L GLDE YNP++  +QGK ++S
Subjt:  LFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNPVIAVIQGKSDIS

TrEMBL top hitse value%identityAlignment
A0A5A7SIT7 Uncharacterized protein6.0e-5261.88Show/hide
Query:  MPILRGYKLEEHLIEESKCPDKYIPASSARES--HSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEAT
        +PIL+GYKLE HL  E+ CP  ++ ++S+  +     G DAT   +SS   R+   VN  FE+WVTTDLLLLGWLYNSM P+V +QLMGF+N +DLW+AT
Subjt:  MPILRGYKLEEHLIEESKCPDKYIPASSARES--HSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEAT

Query:  QDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNPVIAVIQGKSDIS
        QD FGVQSRAEEDFLRQM QTTRKG+ KMEEYL  MK+  D+L Q G+ V  R+L+SQ LLGLDE YN VI VIQGK DIS
Subjt:  QDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNPVIAVIQGKSDIS

A0A5A7UY76 Integrase, catalytic core4.8e-4161.84Show/hide
Query:  ESKCPDKYIPASSARESHSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLRQ
        E+ CP K+I  +   ES S G    TDGA SS+    +TVNP F++WVT+DLLLLGW+YNSM  EV  QLMGF+ AKDL EA QDLFGVQSR EEDFLR 
Subjt:  ESKCPDKYIPASSARESHSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLRQ

Query:  MFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNP
         FQTTRKG+ KME+YL+ MK+ A++L Q G+ +  RSL+SQ LLGLDE YNP
Subjt:  MFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNP

A0A5D3BCH9 Uncharacterized protein8.7e-4359.75Show/hide
Query:  MPILRGYKLEEHLIEESKCPDKYIPASSARES--HSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEAT
        +PIL+GYKLE HL  E+ CP  ++ ++S+  +     G DAT   +SS   R+   VN  FE+WVTTDLLLLGWLYNSM P+V +QLMGF+N +DLW+AT
Subjt:  MPILRGYKLEEHLIEESKCPDKYIPASSARES--HSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEAT

Query:  QDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQT
        QD FGVQSRAEEDFLRQM QTTRKG+ KMEEYL  MK+  D+L Q G+ V  R+L+SQT
Subjt:  QDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQT

A0A6J1D5J0 uncharacterized protein LOC1110175017.3e-4265.93Show/hide
Query:  SSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQT
        SSS       +NP +E WVTTD LLLGWLYNSM PEV  Q+MG+ NA DLW A Q+LFGVQS+AEED+LRQ+FQ TRKGS+KM ++L+ MKS+AD+L Q 
Subjt:  SSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQT

Query:  GNSVSTRSLVSQTLLGLDETYNPVIAVIQGKSDIS
        G+ V TRSL+SQ LLGLDE YNPV+A IQGK  IS
Subjt:  GNSVSTRSLVSQTLLGLDETYNPVIAVIQGKSDIS

A0A6J1DCW4 uncharacterized protein LOC1110195985.6e-4250.84Show/hide
Query:  MPILRGYKLEEHLIEESKCPDKYIPASSARESHSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQD
        +PILR YKL ++L  +  CP           +H   TD  T+   S+  +   T+NP +E W+  D LLLGWLYNSM  +V +Q+MGFS +++LW A Q+
Subjt:  MPILRGYKLEEHLIEESKCPDKYIPASSARESHSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQD

Query:  LFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNPVIAVIQGKSDIS
        LFGVQSRAE D+L+Q+FQ T KGS++M EYLK MKS+AD+L+  G+SVS R LVSQ L GLDE YNP++  +QGK ++S
Subjt:  LFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNPVIAVIQGKSDIS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G34070.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)4.6e-0426.89Show/hide
Query:  NPDFEKWVTTDLLLLGWLYNSMNP-EVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLV
        N +   W   D ++   LY ++ P +     +  S ++D+W   ++ F     A    L    +T   G M++ +Y + MK  ADSL      V+ R+LV
Subjt:  NPDFEKWVTTDLLLLGWLYNSMNP-EVVVQLMGFSNAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLV

Query:  SQTLLGLDETYNPVIAVIQ
           L GL+  ++ +I VI+
Subjt:  SQTLLGLDETYNPVIAVIQ

AT5G48050.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162)5.3e-0829.66Show/hide
Query:  SFGTDATTDGASSSQGRVIQTVNPDFEK-WVTTDLLLLGWLYNSMNPEVVVQLMGFS-NAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYL
        SFG     DG+S        T  P  EK W   D L+  W+Y ++   ++  ++     A+DLW + ++LF     A         +TT    + + EY 
Subjt:  SFGTDATTDGASSSQGRVIQTVNPDFEK-WVTTDLLLLGWLYNSMNPEVVVQLMGFS-NAKDLWEATQDLFGVQSRAEEDFLRQMFQTTRKGSMKMEEYL

Query:  KTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNPVIAVIQGKS
        + +KS +D L+   + +S R LV   L GL E Y+ ++ VI+ KS
Subjt:  KTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNPVIAVIQGKS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCCATCCTCCGAGGCTACAAGTTAGAAGAGCACCTCATCGAAGAAAGCAAATGTCCGGACAAATACATTCCTGCATCTTCAGCTAGAGAATCTCACTCCTTTGGTAC
AGATGCTACCACTGACGGAGCATCCTCTTCACAAGGGAGAGTTATTCAAACAGTAAATCCTGACTTTGAAAAATGGGTCACTACTGATTTACTTCTTCTCGGTTGGCTAT
ACAACTCCATGAATCCTGAAGTGGTTGTACAACTGATGGGATTCAGCAATGCAAAAGACCTGTGGGAAGCTACACAGGATCTGTTTGGAGTTCAATCAAGAGCCGAAGAA
GACTTCCTACGCCAGATGTTTCAAACTACTCGGAAGGGTAGTATGAAGATGGAAGAGTACCTGAAGACCATGAAATCTTATGCAGATAGCCTCAGTCAAACTGGCAACAG
CGTATCCACCCGATCACTAGTTTCGCAAACTCTTTTAGGTCTTGATGAAACGTACAACCCAGTTATTGCAGTTATTCAAGGTAAGTCCGATATCTCCTAG
mRNA sequenceShow/hide mRNA sequence
ATGCCCATCCTCCGAGGCTACAAGTTAGAAGAGCACCTCATCGAAGAAAGCAAATGTCCGGACAAATACATTCCTGCATCTTCAGCTAGAGAATCTCACTCCTTTGGTAC
AGATGCTACCACTGACGGAGCATCCTCTTCACAAGGGAGAGTTATTCAAACAGTAAATCCTGACTTTGAAAAATGGGTCACTACTGATTTACTTCTTCTCGGTTGGCTAT
ACAACTCCATGAATCCTGAAGTGGTTGTACAACTGATGGGATTCAGCAATGCAAAAGACCTGTGGGAAGCTACACAGGATCTGTTTGGAGTTCAATCAAGAGCCGAAGAA
GACTTCCTACGCCAGATGTTTCAAACTACTCGGAAGGGTAGTATGAAGATGGAAGAGTACCTGAAGACCATGAAATCTTATGCAGATAGCCTCAGTCAAACTGGCAACAG
CGTATCCACCCGATCACTAGTTTCGCAAACTCTTTTAGGTCTTGATGAAACGTACAACCCAGTTATTGCAGTTATTCAAGGTAAGTCCGATATCTCCTAG
Protein sequenceShow/hide protein sequence
MPILRGYKLEEHLIEESKCPDKYIPASSARESHSFGTDATTDGASSSQGRVIQTVNPDFEKWVTTDLLLLGWLYNSMNPEVVVQLMGFSNAKDLWEATQDLFGVQSRAEE
DFLRQMFQTTRKGSMKMEEYLKTMKSYADSLSQTGNSVSTRSLVSQTLLGLDETYNPVIAVIQGKSDIS