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PI0001675 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001675
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionTy3/gypsy retrotransposon protein
Genome locationchr01:13132279..13132842
RNA-Seq ExpressionPI0001675
SyntenyPI0001675
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0046359.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]1.3e-3853.23Show/hide
Query:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK
        M ES+L DAFLTGLEP L AEV+SR P+TLEDCM  AQL+NDRN+ LKLA  + G     + E+  NK+  +  D    +    Q +QITIP+K +Y K 
Subjt:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK

Query:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV
        E P+KRLS++EF ARLDKG CFRC+EK+SHGHRCK++E RELM FI+NE E  E      E   +E   T P EI+ LE P +T +
Subjt:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV

KAA0056659.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]4.8e-3852.69Show/hide
Query:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK
        M ES+L DAFLTGLEP L AEV+SR P+TLE+CM  AQL+NDRN+ LKLA  + G     + E   NK+  +  D    +    Q +QITIP+K +Y K 
Subjt:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK

Query:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV
        E P+KRLS++EF ARLDKG CFRCSEK+SHGHRCK++E RELM FI+NE E  E      E  +++   T P EI+ LE P +T +
Subjt:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV

KAA0059481.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]2.5e-3953.23Show/hide
Query:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK
        M ES+L DAFLTGLEP L AEV+SR P+TLEDCM  AQL+NDRN+ LKLA  + G     + E+  NK+  +  D    +    Q +QITIP+K +Y K 
Subjt:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK

Query:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV
        E P+KRLS++EF ARLDKG CFRC+EK+SHGHRCK++E RELM FI+NE E +E      E   +E   T P EI+ LE P +T +
Subjt:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV

TYK21035.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]5.6e-3953.23Show/hide
Query:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK
        M ES+L DAFLTGLEP L AEV+SR P+TLEDCM  AQL+NDRN+ LKLA  + G     + E+  NK+  +  D    +    Q +QITIP+K +Y K 
Subjt:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK

Query:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV
        E P+KRLS++EF ARLDKG CFRC+EK+SHGHRCK++E RELM FI+NE E  E      E   +E   T P EI+ LE P +T +
Subjt:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV

TYK27963.1 Ty3/gypsy retrotransposon protein [Cucumis melo var. makuwa]3.7e-3852.69Show/hide
Query:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK
        M ES+L DAFLTGLEP L AEV+SR P+TLEDCM  AQL+NDRN+ LKLA  + G     + E+  NK+  +  D    +    Q +QITIP+K +Y K 
Subjt:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK

Query:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV
        E P+KRLS++EF ARLDKG CFRC+EK+SHGHRCK++E RELM FI+NE E  E      E   +E   T P EI+ L  P +T +
Subjt:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV

TrEMBL top hitse value%identityAlignment
A0A5A7TYN3 Ty3/gypsy retrotransposon protein6.1e-3953.23Show/hide
Query:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK
        M ES+L DAFLTGLEP L AEV+SR P+TLEDCM  AQL+NDRN+ LKLA  + G     + E+  NK+  +  D    +    Q +QITIP+K +Y K 
Subjt:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK

Query:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV
        E P+KRLS++EF ARLDKG CFRC+EK+SHGHRCK++E RELM FI+NE E  E      E   +E   T P EI+ LE P +T +
Subjt:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV

A0A5A7UT21 Ty3/gypsy retrotransposon protein2.3e-3852.69Show/hide
Query:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK
        M ES+L DAFLTGLEP L AEV+SR P+TLE+CM  AQL+NDRN+ LKLA  + G     + E   NK+  +  D    +    Q +QITIP+K +Y K 
Subjt:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK

Query:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV
        E P+KRLS++EF ARLDKG CFRCSEK+SHGHRCK++E RELM FI+NE E  E      E  +++   T P EI+ LE P +T +
Subjt:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV

A0A5A7V194 Ty3/gypsy retrotransposon protein1.2e-3953.23Show/hide
Query:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK
        M ES+L DAFLTGLEP L AEV+SR P+TLEDCM  AQL+NDRN+ LKLA  + G     + E+  NK+  +  D    +    Q +QITIP+K +Y K 
Subjt:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK

Query:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV
        E P+KRLS++EF ARLDKG CFRC+EK+SHGHRCK++E RELM FI+NE E +E      E   +E   T P EI+ LE P +T +
Subjt:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV

A0A5D3DWA9 Ty3/gypsy retrotransposon protein1.8e-3852.69Show/hide
Query:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK
        M ES+L DAFLTGLEP L AEV+SR P+TLEDCM  AQL+NDRN+ LKLA  + G     + E+  NK+  +  D    +    Q +QITIP+K +Y K 
Subjt:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK

Query:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV
        E P+KRLS++EF ARLDKG CFRC+EK+SHGHRCK++E RELM FI+NE E  E      E   +E   T P EI+ L  P +T +
Subjt:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV

A0A5D3E325 Ty3/gypsy retrotransposon protein2.7e-3953.23Show/hide
Query:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK
        M ES+L DAFLTGLEP L AEV+SR P+TLEDCM  AQL+NDRN+ LKLA  + G     + E+  NK+  +  D    +    Q +QITIP+K +Y K 
Subjt:  MEESILMDAFLTGLEPELHAEVVSR-PETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKK

Query:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV
        E P+KRLS++EF ARLDKG CFRC+EK+SHGHRCK++E RELM FI+NE E  E      E   +E   T P EI+ LE P +T +
Subjt:  ELPLKRLSNSEFWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGAGAGTATCCTGATGGACGCTTTTCTAACTGGCCTAGAACCGGAGTTACACGCAGAGGTGGTAAGCCGCCCTGAAACGCTAGAAGATTGTATGAGGGAAGCGCA
GCTGATAAATGATCGGAATATAACCCTAAAGTTGGCTTTTAACAAATGGGGGGCCCATGGGTCGGGTAAGAAGGAAGCCCACACTAACAAGATTAATACATCAACCATCG
ACCATAGTGGGCCGAAAAGTGGGAATAACCAAACCCGACAGATCACCATACCCATTAAAAGGAATTACGTGAAGAAGGAACTGCCATTAAAAAGACTATCGAATAGTGAA
TTTTGGGCACGATTAGATAAAGGGCAATGTTTTCGTTGTAGCGAGAAGTGGTCCCATGGTCATCGCTGCAAAGTCAGAGAGAACCGGGAACTCATGCAATTTATTATGAA
TGAGGTAGAGGAGGTGGAAGTGTTGGCAGACATGGGAGAGGAAGCCGCAACGGAGGAGGATGAAACTCAGCCGGCTGAAATCTCTTCTCTTGAAATTCCCAGTAAGACAG
AAGTGGCATTGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAGAGAGTATCCTGATGGACGCTTTTCTAACTGGCCTAGAACCGGAGTTACACGCAGAGGTGGTAAGCCGCCCTGAAACGCTAGAAGATTGTATGAGGGAAGCGCA
GCTGATAAATGATCGGAATATAACCCTAAAGTTGGCTTTTAACAAATGGGGGGCCCATGGGTCGGGTAAGAAGGAAGCCCACACTAACAAGATTAATACATCAACCATCG
ACCATAGTGGGCCGAAAAGTGGGAATAACCAAACCCGACAGATCACCATACCCATTAAAAGGAATTACGTGAAGAAGGAACTGCCATTAAAAAGACTATCGAATAGTGAA
TTTTGGGCACGATTAGATAAAGGGCAATGTTTTCGTTGTAGCGAGAAGTGGTCCCATGGTCATCGCTGCAAAGTCAGAGAGAACCGGGAACTCATGCAATTTATTATGAA
TGAGGTAGAGGAGGTGGAAGTGTTGGCAGACATGGGAGAGGAAGCCGCAACGGAGGAGGATGAAACTCAGCCGGCTGAAATCTCTTCTCTTGAAATTCCCAGTAAGACAG
AAGTGGCATTGTAG
Protein sequenceShow/hide protein sequence
MEESILMDAFLTGLEPELHAEVVSRPETLEDCMREAQLINDRNITLKLAFNKWGAHGSGKKEAHTNKINTSTIDHSGPKSGNNQTRQITIPIKRNYVKKELPLKRLSNSE
FWARLDKGQCFRCSEKWSHGHRCKVRENRELMQFIMNEVEEVEVLADMGEEAATEEDETQPAEISSLEIPSKTEVAL