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PI0001686 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001686
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionsynaptotagmin A
Genome locationchr06:12796351..12797066
RNA-Seq ExpressionPI0001686
SyntenyPI0001686
Gene Ontology termsGO:0006869 - lipid transport (biological process)
GO:0006979 - response to oxidative stress (biological process)
GO:0098869 - cellular oxidant detoxification (biological process)
GO:0005777 - peroxisome (cellular component)
GO:0012505 - endomembrane system (cellular component)
GO:0016021 - integral component of membrane (cellular component)
GO:0004601 - peroxidase activity (molecular function)
GO:0008289 - lipid binding (molecular function)
GO:0020037 - heme binding (molecular function)
GO:0046872 - metal ion binding (molecular function)
InterPro domainsIPR045050 - Synaptotagmin, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GFY95796.1 calcium-dependent lipid-binding (CaLB domain) family protein [Actinidia rufa]3.5e-1292.5Show/hide
Query:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR
        MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAK ++
Subjt:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR

KAA8528765.1 hypothetical protein F0562_036120 [Nyssa sinensis]3.5e-1292.5Show/hide
Query:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR
        MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAK ++
Subjt:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR

KAF5943134.1 hypothetical protein HYC85_020776 [Camellia sinensis]3.5e-1292.5Show/hide
Query:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR
        MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAK ++
Subjt:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR

PSS17966.1 Synaptotagmin-2 like [Actinidia chinensis var. chinensis]3.5e-1292.5Show/hide
Query:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR
        MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAK ++
Subjt:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR

THG15796.1 hypothetical protein TEA_023656 [Camellia sinensis var. sinensis]3.5e-1292.5Show/hide
Query:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR
        MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAK ++
Subjt:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR

TrEMBL top hitse value%identityAlignment
A0A2R6R000 Synaptotagmin-2 like1.7e-1292.5Show/hide
Query:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR
        MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAK ++
Subjt:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR

A0A5B6YHA2 Putative synaptotagmin-21.7e-1292.5Show/hide
Query:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR
        MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAK ++
Subjt:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR

A0A5B6YHH5 Putative synaptotagmin-21.7e-1292.5Show/hide
Query:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR
        MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAK ++
Subjt:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR

A0A5B6YHQ5 Putative synaptotagmin-21.7e-1292.5Show/hide
Query:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR
        MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAK ++
Subjt:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR

A0A7J0FBJ2 Calcium-dependent lipid-binding (CaLB domain) family protein1.7e-1292.5Show/hide
Query:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR
        MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAK ++
Subjt:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR

SwissProt top hitse value%identityAlignment
B6ETT4 Synaptotagmin-21.3e-1280Show/hide
Query:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR
        M+IPGLYRFVQE+IKDQVANMYLWPKTL V IMDP+K ++
Subjt:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR

Q7XA06 Synaptotagmin-37.2e-0870.59Show/hide
Query:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMD
        MSIPGLYR+VQE IK QV++MY WP+ LE+PI+D
Subjt:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMD

Q9SKR2 Synaptotagmin-12.5e-1387.5Show/hide
Query:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR
        MSIPGLYRFVQE IKDQVANMYLWPKTL VPI+DPAK  R
Subjt:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR

Arabidopsis top hitse value%identityAlignment
AT1G20080.1 Calcium-dependent lipid-binding (CaLB domain) family protein9.0e-1480Show/hide
Query:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR
        M+IPGLYRFVQE+IKDQVANMYLWPKTL V IMDP+K ++
Subjt:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR

AT2G20990.1 synaptotagmin A1.8e-1487.5Show/hide
Query:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR
        MSIPGLYRFVQE IKDQVANMYLWPKTL VPI+DPAK  R
Subjt:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR

AT2G20990.2 synaptotagmin A1.8e-1487.5Show/hide
Query:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR
        MSIPGLYRFVQE IKDQVANMYLWPKTL VPI+DPAK  R
Subjt:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVR

AT2G20990.3 synaptotagmin A8.7e-0944.87Show/hide
Query:  MSIPGLYRFVQ--------------------------------------ELIKDQVANMYLWPKTLEVPIMDPAKYVR
        MSIPGLYRFVQ                                      E IKDQVANMYLWPKTL VPI+DPAK  R
Subjt:  MSIPGLYRFVQ--------------------------------------ELIKDQVANMYLWPKTLEVPIMDPAKYVR

AT5G04220.2 Calcium-dependent lipid-binding (CaLB domain) family protein5.1e-0970.59Show/hide
Query:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMD
        MSIPGLYR+VQE IK QV++MY WP+ LE+PI+D
Subjt:  MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCCATCCCAGGGCTGTATAGGTTTGTTCAGGAACTAATAAAAGATCAAGTTGCCAATATGTATCTATGGCCCAAGACCCTTGAAGTACCTATAATGGACCCTGCGAA
GTATGTGAGATTCATCAATGCAAGCTATGAAAGTGGTGGAGGCAATTTCAGTTCAGGAGATAATATGTTTGGGAATGGTCATGATGTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCCATCCCAGGGCTGTATAGGTTTGTTCAGGAACTAATAAAAGATCAAGTTGCCAATATGTATCTATGGCCCAAGACCCTTGAAGTACCTATAATGGACCCTGCGAA
GTATGTGAGATTCATCAATGCAAGCTATGAAAGTGGTGGAGGCAATTTCAGTTCAGGAGATAATATGTTTGGGAATGGTCATGATGTGTAA
Protein sequenceShow/hide protein sequence
MSIPGLYRFVQELIKDQVANMYLWPKTLEVPIMDPAKYVRFINASYESGGGNFSSGDNMFGNGHDV