; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0001705 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001705
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr06:19826982..19827545
RNA-Seq ExpressionPI0001705
SyntenyPI0001705
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025964.1 uncharacterized protein E6C27_scaffold34G002790 [Cucumis melo var. makuwa]1.8e-3654.44Show/hide
Query:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA
        +E RGKL RLR TGSI DYVKEF+ LMLEI DL EK+ LF FKD LKDWAK+ELDRRNVQTLD+A A  ETLVDYS Q KGKK GP K  GK +K K+  
Subjt:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA

Query:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV
        R++GGK K+F  K GK  G H                    +D PNRKA+N LVAK +E KQ        + S+Q + V+
Subjt:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV

KAA0040659.1 uncharacterized protein E6C27_scaffold370G00130 [Cucumis melo var. makuwa]1.6e-3755.56Show/hide
Query:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA
        +E RGKL RLR TGSI DYVKEF+ LMLEI DL EK+ LF FKD LKDWAK+ELDRRNVQTLD+A AVAETLVDYS Q KGKK GP K  GK +K K+  
Subjt:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA

Query:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV
        R++GGK K+F  K GK  G H                    +D PNRKA+N LVAK +E KQ        + S+Q + V+
Subjt:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV

KAA0065760.1 polyprotein [Cucumis melo var. makuwa]1.8e-3654.44Show/hide
Query:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA
        +E RGKL RLR TGSI +YVKEF+ LMLEI DL EK+ LF FKD LKDWAK+ELDRRNVQTLD+A A AETLVDYS Q KGKK GP K  GK +K K+  
Subjt:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA

Query:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV
        RR+GGK K+F  K GK  G H                    +D PN+KA+N LVAK +E KQ        + S+Q + V+
Subjt:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV

KAA0068130.1 uncharacterized protein E6C27_scaffold238G00920 [Cucumis melo var. makuwa]3.1e-3654.44Show/hide
Query:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA
        +E RGKL RLR TGSI DYVKEF+ LMLEI DL EK+ LF FKD LKDWAK+ELDRRNVQTLD+A A AETLVDYS Q KGKK GP K  GK +K K+  
Subjt:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA

Query:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV
        R++GGK K+F  + GK  G H                    +D PNRKA+N LVAK +E KQ        + S+Q + V+
Subjt:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV

XP_008455798.1 PREDICTED: uncharacterized protein LOC103495894 [Cucumis melo]1.8e-3654.44Show/hide
Query:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA
        +E RGKL RLR TGSI DYVKEF+ LMLEI DL EK+ LF FKD LKDWAK+ELDRRNVQTLD+A A  ETLVDYS Q KGKK GP K  GK +K K+  
Subjt:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA

Query:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV
        R++GGK K+F  K GK  G H                    +D PNRKA+N LVAK +E KQ        + S+Q + V+
Subjt:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV

TrEMBL top hitse value%identityAlignment
A0A1S3C1B3 uncharacterized protein LOC1034958948.7e-3754.44Show/hide
Query:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA
        +E RGKL RLR TGSI DYVKEF+ LMLEI DL EK+ LF FKD LKDWAK+ELDRRNVQTLD+A A  ETLVDYS Q KGKK GP K  GK +K K+  
Subjt:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA

Query:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV
        R++GGK K+F  K GK  G H                    +D PNRKA+N LVAK +E KQ        + S+Q + V+
Subjt:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV

A0A5A7SJU9 Uncharacterized protein8.7e-3754.44Show/hide
Query:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA
        +E RGKL RLR TGSI DYVKEF+ LMLEI DL EK+ LF FKD LKDWAK+ELDRRNVQTLD+A A  ETLVDYS Q KGKK GP K  GK +K K+  
Subjt:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA

Query:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV
        R++GGK K+F  K GK  G H                    +D PNRKA+N LVAK +E KQ        + S+Q + V+
Subjt:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV

A0A5A7THC0 Reverse transcriptase domain-containing protein7.8e-3855.56Show/hide
Query:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA
        +E RGKL RLR TGSI DYVKEF+ LMLEI DL EK+ LF FKD LKDWAK+ELDRRNVQTLD+A AVAETLVDYS Q KGKK GP K  GK +K K+  
Subjt:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA

Query:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV
        R++GGK K+F  K GK  G H                    +D PNRKA+N LVAK +E KQ        + S+Q + V+
Subjt:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV

A0A5A7VEX8 Polyprotein8.7e-3754.44Show/hide
Query:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA
        +E RGKL RLR TGSI +YVKEF+ LMLEI DL EK+ LF FKD LKDWAK+ELDRRNVQTLD+A A AETLVDYS Q KGKK GP K  GK +K K+  
Subjt:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA

Query:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV
        RR+GGK K+F  K GK  G H                    +D PN+KA+N LVAK +E KQ        + S+Q + V+
Subjt:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV

A0A5A7VLQ6 Uncharacterized protein1.5e-3654.44Show/hide
Query:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA
        +E RGKL RLR TGSI DYVKEF+ LMLEI DL EK+ LF FKD LKDWAK+ELDRRNVQTLD+A A AETLVDYS Q KGKK GP K  GK +K K+  
Subjt:  MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFK-SGKGEKQKDHA

Query:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV
        R++GGK K+F  + GK  G H                    +D PNRKA+N LVAK +E KQ        + S+Q + V+
Subjt:  RREGGKAKSFNGKYGKATGNH--------------------KDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAATACGAGGTAAACTCCTACGCCTTAGACAAACTGGGAGTATATTTGATTATGTTAAGGAGTTTTCCAGGCTCATGCTAGAAATAGACGACTTGTCCGAGAAAGA
TGTCCTTTTCCATTTTAAAGACAGATTAAAGGATTGGGCCAAGGTGGAACTAGACCGTCGAAATGTACAAACCCTAGATAACGCCAATGCTGTAGCAGAGACTCTTGTTG
ATTACTCTATCCAACAAAAGGGGAAGAAGTCTGGTCCGTTCAAAAGTGGAAAGGGTGAGAAGCAAAAAGATCATGCTCGACGAGAAGGCGGAAAGGCAAAATCTTTCAAC
GGCAAGTATGGCAAGGCTACGGGCAACCATAAAGATTCTCCAAATCGGAAAGCTATGAATCCTCTCGTGGCCAAACTTCGAGAAACCAAGCAAAATGCCACCACACAGAA
GGCCCATATGCGATCGCTCCAATTCCTTAATGTCGTAGCTGCATACCTGGTGGAGGAAGACTAG
mRNA sequenceShow/hide mRNA sequence
ATGGAAATACGAGGTAAACTCCTACGCCTTAGACAAACTGGGAGTATATTTGATTATGTTAAGGAGTTTTCCAGGCTCATGCTAGAAATAGACGACTTGTCCGAGAAAGA
TGTCCTTTTCCATTTTAAAGACAGATTAAAGGATTGGGCCAAGGTGGAACTAGACCGTCGAAATGTACAAACCCTAGATAACGCCAATGCTGTAGCAGAGACTCTTGTTG
ATTACTCTATCCAACAAAAGGGGAAGAAGTCTGGTCCGTTCAAAAGTGGAAAGGGTGAGAAGCAAAAAGATCATGCTCGACGAGAAGGCGGAAAGGCAAAATCTTTCAAC
GGCAAGTATGGCAAGGCTACGGGCAACCATAAAGATTCTCCAAATCGGAAAGCTATGAATCCTCTCGTGGCCAAACTTCGAGAAACCAAGCAAAATGCCACCACACAGAA
GGCCCATATGCGATCGCTCCAATTCCTTAATGTCGTAGCTGCATACCTGGTGGAGGAAGACTAG
Protein sequenceShow/hide protein sequence
MEIRGKLLRLRQTGSIFDYVKEFSRLMLEIDDLSEKDVLFHFKDRLKDWAKVELDRRNVQTLDNANAVAETLVDYSIQQKGKKSGPFKSGKGEKQKDHARREGGKAKSFN
GKYGKATGNHKDSPNRKAMNPLVAKLRETKQNATTQKAHMRSLQFLNVVAAYLVEED