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PI0001759 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001759
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionBEST Arabidopsis thaliana protein match is: NHL domain-containing protein .
Genome locationchr02:24162823..24163326
RNA-Seq ExpressionPI0001759
SyntenyPI0001759
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0057881.1 putative Serine/arginine repetitive matrix protein 2 [Cucumis melo var. makuwa]8.5e-8792Show/hide
Query:  MAFTDV-EEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS--
        MAFTDV +EESP CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+EGRWWARGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRS  
Subjt:  MAFTDV-EEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS--

Query:  -----GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
             GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Subjt:  -----GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA

XP_008453108.1 PREDICTED: uncharacterized protein LOC103493921 [Cucumis melo]5.0e-8793.06Show/hide
Query:  MAFTDV-EEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS--
        MAFTDV +EESP CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+EGRWWARGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRS  
Subjt:  MAFTDV-EEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS--

Query:  ---GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
           GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Subjt:  ---GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA

XP_011657987.1 uncharacterized protein LOC105435925 [Cucumis sativus]1.5e-8893.14Show/hide
Query:  MAFTDVEEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNR----
        MAFTDVEEESP C+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWW RGVRVLLKLREWSEIVAGPRWKTFIRRFNRNR    
Subjt:  MAFTDVEEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNR----

Query:  ----SGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
            SGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTK+VSAVA
Subjt:  ----SGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA

XP_022988416.1 uncharacterized protein LOC111485666 [Cucurbita maxima]9.7e-7582.56Show/hide
Query:  MAFTDVEEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGG
        MA+ D  EE P  EAD SNSLLPT RCGCFRLSC  SRR   VGPSWWERIR SQVH+EGRWWARGVRV+LK+REWSEIVAGPRWKTFIRRFNRNR+GGG
Subjt:  MAFTDVEEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGG

Query:  GGSGV---RAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT--KDVSAVA
        GG G    R GKFQYDPLSYAMNFDEGSRQIGELDDD DDFNGYRNFSARYASIPAPLKTGGT  KD+S VA
Subjt:  GGSGV---RAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT--KDVSAVA

XP_038878924.1 uncharacterized protein LOC120071012 [Benincasa hispida]2.5e-8695.86Show/hide
Query:  MAFTDVEEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGG
        MAFTDVEEESP CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWER+RASQVH+EGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGG
Subjt:  MAFTDVEEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGG

Query:  GGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT--KDVSAVA
        GG GVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT  KDVS+VA
Subjt:  GGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT--KDVSAVA

TrEMBL top hitse value%identityAlignment
A0A0A0LUB2 Uncharacterized protein7.5e-8993.14Show/hide
Query:  MAFTDVEEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNR----
        MAFTDVEEESP C+ADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWW RGVRVLLKLREWSEIVAGPRWKTFIRRFNRNR    
Subjt:  MAFTDVEEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNR----

Query:  ----SGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
            SGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTK+VSAVA
Subjt:  ----SGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA

A0A1S3BVG0 uncharacterized protein LOC1034939212.4e-8793.06Show/hide
Query:  MAFTDV-EEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS--
        MAFTDV +EESP CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+EGRWWARGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRS  
Subjt:  MAFTDV-EEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS--

Query:  ---GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
           GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Subjt:  ---GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA

A0A5A7UWM1 Putative Serine/arginine repetitive matrix protein 24.1e-8792Show/hide
Query:  MAFTDV-EEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS--
        MAFTDV +EESP CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+EGRWWARGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRS  
Subjt:  MAFTDV-EEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS--

Query:  -----GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
             GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Subjt:  -----GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA

A0A5D3BK38 Putative Serine/arginine repetitive matrix protein 22.4e-8793.06Show/hide
Query:  MAFTDV-EEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS--
        MAFTDV +EESP CEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVH+EGRWWARGV+V+LKLREWSEIVAGPRWKTFIRRFNRNRS  
Subjt:  MAFTDV-EEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRS--

Query:  ---GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
           GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDD+DDFNGYRNFSARYASIPAPLKTGGTKDVSAVA
Subjt:  ---GGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA

A0A6J1JH52 uncharacterized protein LOC1114856664.7e-7582.56Show/hide
Query:  MAFTDVEEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGG
        MA+ D  EE P  EAD SNSLLPT RCGCFRLSC  SRR   VGPSWWERIR SQVH+EGRWWARGVRV+LK+REWSEIVAGPRWKTFIRRFNRNR+GGG
Subjt:  MAFTDVEEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGG

Query:  GGSGV---RAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT--KDVSAVA
        GG G    R GKFQYDPLSYAMNFDEGSRQIGELDDD DDFNGYRNFSARYASIPAPLKTGGT  KD+S VA
Subjt:  GGSGV---RAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGT--KDVSAVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT3G01430.1 BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1)8.9e-2639.53Show/hide
Query:  EESPSCEADKSNSL---LPTARCGCFRLSCFGSRRVATVGPS-WWERI-RASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGG
        +  P  E D ++ +   L   R  CF + C  S + +T G S WW+RI    ++  + RWW RG R   ++REWSE+VAGPRWKT+IRRF R+   GGGG
Subjt:  EESPSCEADKSNSL---LPTARCGCFRLSCFGSRRVATVGPS-WWERI-RASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGG

Query:  SGV-----------------RAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKT
          V                   GKF+YD LSY++NFD+G+ Q G  DD+      YR++S R+A+   P+ T
Subjt:  SGV-----------------RAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKT

AT3G48020.1 unknown protein1.7e-2452.25Show/hide
Query:  TVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGY
        TV  SWW+RI  +  H E RWW   VR  LK+REWSEIVAGPRWKTFIRRFNR+   G       + KF+YDP+SY ++F++  +     DDD     G 
Subjt:  TVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGSGVRAGKFQYDPLSYAMNFDEGSRQIGELDDDIDDFNGY

Query:  RNFSARYASIP
        R+FS RYAS+P
Subjt:  RNFSARYASIP

AT5G14890.1 NHL domain-containing protein1.1e-2341.89Show/hide
Query:  DKSNSLLPTARCGCFRLSCFGSRRVA-TVGPSWWERIR-ASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNR--SGG--GGGSGVRAGK
        D+ +  +   R  CF L C GS + +   G  WW+RIR   ++  + RWW  G    +K+REWSEIVAGP+WKTFIRRF RN   +GG  GG +      
Subjt:  DKSNSLLPTARCGCFRLSCFGSRRVA-TVGPSWWERIR-ASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNR--SGG--GGGSGVRAGK

Query:  FQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKT
        F+YD  SY++NFD+G +Q G  +D+      YR++S R+A+   P+ T
Subjt:  FQYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKT

AT5G25240.1 unknown protein6.0e-0640Show/hide
Query:  QVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGSGVRAGKFQYDPLSYAMNFDEG
        Q    G W   G   L  L+E SE +AGP+WK FIR F+  R         R   F YD  +Y++NFD+G
Subjt:  QVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGSGVRAGKFQYDPLSYAMNFDEG

AT5G62865.1 unknown protein1.1e-2348.91Show/hide
Query:  RCGCFRLSCFGSRRVATVGPSWWERIRASQVHN-------EGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGSGVRAGKFQYDPLSYA
        RC CF  S   SR    VG S W RIR     N       E RWW   +R  LK+REWSEIVAGPRWKTFIRRFNR+   G       + KFQYDPLSY+
Subjt:  RCGCFRLSCFGSRRVATVGPSWWERIRASQVHN-------EGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGSGVRAGKFQYDPLSYA

Query:  MNFDEGSRQIGELDDDIDDF---NGYRNFSARYASIP
        +NFD+        DD+ D++    G R+FS R+AS+P
Subjt:  MNFDEGSRQIGELDDDIDDF---NGYRNFSARYASIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCGTTTACTGATGTAGAAGAAGAGTCTCCTTCTTGTGAGGCTGATAAATCCAATTCTTTGTTGCCAACAGCCCGGTGCGGTTGTTTCCGGCTATCGTGTTTTGGATC
TCGCCGTGTAGCCACTGTCGGACCATCGTGGTGGGAGCGGATTAGGGCATCGCAAGTTCATAACGAGGGACGGTGGTGGGCGCGAGGGGTTAGGGTTCTTTTGAAGCTCC
GTGAGTGGTCGGAGATTGTTGCTGGACCGAGATGGAAGACTTTCATTCGTCGATTTAATCGGAATCGTAGTGGTGGTGGTGGTGGAAGTGGTGTTAGGGCTGGGAAATTT
CAATATGATCCTTTGAGTTACGCTATGAATTTCGATGAAGGTTCGAGACAGATTGGTGAATTGGATGATGATATAGATGATTTCAATGGTTATCGAAACTTCTCTGCTCG
TTATGCTTCGATTCCGGCGCCGTTGAAGACTGGAGGAACTAAGGATGTTTCTGCCGTCGCGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCGTTTACTGATGTAGAAGAAGAGTCTCCTTCTTGTGAGGCTGATAAATCCAATTCTTTGTTGCCAACAGCCCGGTGCGGTTGTTTCCGGCTATCGTGTTTTGGATC
TCGCCGTGTAGCCACTGTCGGACCATCGTGGTGGGAGCGGATTAGGGCATCGCAAGTTCATAACGAGGGACGGTGGTGGGCGCGAGGGGTTAGGGTTCTTTTGAAGCTCC
GTGAGTGGTCGGAGATTGTTGCTGGACCGAGATGGAAGACTTTCATTCGTCGATTTAATCGGAATCGTAGTGGTGGTGGTGGTGGAAGTGGTGTTAGGGCTGGGAAATTT
CAATATGATCCTTTGAGTTACGCTATGAATTTCGATGAAGGTTCGAGACAGATTGGTGAATTGGATGATGATATAGATGATTTCAATGGTTATCGAAACTTCTCTGCTCG
TTATGCTTCGATTCCGGCGCCGTTGAAGACTGGAGGAACTAAGGATGTTTCTGCCGTCGCGTAA
Protein sequenceShow/hide protein sequence
MAFTDVEEESPSCEADKSNSLLPTARCGCFRLSCFGSRRVATVGPSWWERIRASQVHNEGRWWARGVRVLLKLREWSEIVAGPRWKTFIRRFNRNRSGGGGGSGVRAGKF
QYDPLSYAMNFDEGSRQIGELDDDIDDFNGYRNFSARYASIPAPLKTGGTKDVSAVA