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PI0001778 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001778
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionMediator of RNA polymerase II transcription subunit 12-like isoform X1
Genome locationchr09:16847536..16849825
RNA-Seq ExpressionPI0001778
SyntenyPI0001778
Gene Ontology termsGO:0010073 - meristem maintenance (biological process)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0050313.1 serine/threonine-protein phosphatase 7 long form-like protein [Cucumis melo var. makuwa]3.6e-1161.29Show/hide
Query:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIVSVRSNNSR
        M+A NEY E R ET+DEFEEMDF+G E+E  SN FT+LDM+AVD+I+EHD IIV + ++N++
Subjt:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIVSVRSNNSR

KAA0064191.1 uncharacterized protein E6C27_scaffold548G001300 [Cucumis melo var. makuwa]1.2e-1160.66Show/hide
Query:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIVSVRSNNS
        M+ANNEY + R ET+DEFEE DF+GREHE  SN  T++DMD +D+IREHD I+  V ++NS
Subjt:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIVSVRSNNS

TYJ97998.1 uncharacterized protein E5676_scaffold487G00210 [Cucumis melo var. makuwa]2.5e-1266.13Show/hide
Query:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIVSVRSNNSR
        M+ANNEYRE R ET+DEFEEM FNGRE+E  SN F ELDM+AVD+I+EHD IIV + ++N++
Subjt:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIVSVRSNNSR

TYK01570.1 mediator of RNA polymerase II transcription subunit 12-like isoform X1 [Cucumis melo var. makuwa]4.0e-1841.51Show/hide
Query:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIV----------------------------------------------
        M+A NEY E R ET+DEFEEMDF+G E+E  SN FT+LDM+AVD I+EHD IIV                                              
Subjt:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIV----------------------------------------------

Query:  ----------------------SVRSNNSRFRDVADDPQQVLYICNDNEWYMENIHYVY
                               +RSNN R R+VADDPQQVL ICNDNE YMENIHY+Y
Subjt:  ----------------------SVRSNNSRFRDVADDPQQVLYICNDNEWYMENIHYVY

TYK02838.1 uncharacterized protein E5676_scaffold218G00330 [Cucumis melo var. makuwa]1.2e-1160.66Show/hide
Query:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIVSVRSNNS
        M+ANNEY + R ET+DEFEE DF+GREHE  SN  T++DMD +D+IREHD I+  V ++NS
Subjt:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIVSVRSNNS

TrEMBL top hitse value%identityAlignment
A0A5A7U326 Serine/threonine-protein phosphatase 7 long form-like protein1.7e-1161.29Show/hide
Query:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIVSVRSNNSR
        M+A NEY E R ET+DEFEEMDF+G E+E  SN FT+LDM+AVD+I+EHD IIV + ++N++
Subjt:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIVSVRSNNSR

A0A5A7VEM9 MULE domain-containing protein6.0e-1260.66Show/hide
Query:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIVSVRSNNS
        M+ANNEY + R ET+DEFEE DF+GREHE  SN  T++DMD +D+IREHD I+  V ++NS
Subjt:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIVSVRSNNS

A0A5D3BII2 Uncharacterized protein1.2e-1266.13Show/hide
Query:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIVSVRSNNSR
        M+ANNEYRE R ET+DEFEEM FNGRE+E  SN F ELDM+AVD+I+EHD IIV + ++N++
Subjt:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIVSVRSNNSR

A0A5D3BR52 Mediator of RNA polymerase II transcription subunit 12-like isoform X11.9e-1841.51Show/hide
Query:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIV----------------------------------------------
        M+A NEY E R ET+DEFEEMDF+G E+E  SN FT+LDM+AVD I+EHD IIV                                              
Subjt:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIV----------------------------------------------

Query:  ----------------------SVRSNNSRFRDVADDPQQVLYICNDNEWYMENIHYVY
                               +RSNN R R+VADDPQQVL ICNDNE YMENIHY+Y
Subjt:  ----------------------SVRSNNSRFRDVADDPQQVLYICNDNEWYMENIHYVY

A0A5D3BV30 MULE domain-containing protein6.0e-1260.66Show/hide
Query:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIVSVRSNNS
        M+ANNEY + R ET+DEFEE DF+GREHE  SN  T++DMD +D+IREHD I+  V ++NS
Subjt:  MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIVSVRSNNS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTGGCTAACAATGAATATAGAGAGCTTAGAGTAGAGACTAATGATGAATTTGAAGAGATGGACTTTAATGGTCGTGAACATGAATTTTTCTCAAATGCATTCACTGA
GTTGGACATGGATGCAGTAGATAACATTCGAGAACACGATCTAATTATAGTCTCGGTGAGATCAAACAACAGTAGATTTCGTGATGTTGCTGATGATCCACAACAGGTCC
TATATATATGCAATGATAATGAGTGGTATATGGAGAACATACACTATGTGTACCCATTATACATGTACCAGTTCAAAGGAGACGTGCTCAAGTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTGGCTAACAATGAATATAGAGAGCTTAGAGTAGAGACTAATGATGAATTTGAAGAGATGGACTTTAATGGTCGTGAACATGAATTTTTCTCAAATGCATTCACTGA
GTTGGACATGGATGCAGTAGATAACATTCGAGAACACGATCTAATTATAGTCTCGGTGAGATCAAACAACAGTAGATTTCGTGATGTTGCTGATGATCCACAACAGGTCC
TATATATATGCAATGATAATGAGTGGTATATGGAGAACATACACTATGTGTACCCATTATACATGTACCAGTTCAAAGGAGACGTGCTCAAGTGA
Protein sequenceShow/hide protein sequence
MLANNEYRELRVETNDEFEEMDFNGREHEFFSNAFTELDMDAVDNIREHDLIIVSVRSNNSRFRDVADDPQQVLYICNDNEWYMENIHYVYPLYMYQFKGDVLK