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PI0001779 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001779
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr07:18960292..18960774
RNA-Seq ExpressionPI0001779
SyntenyPI0001779
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042140.1 uncharacterized protein E6C27_scaffold67G006290 [Cucumis melo var. makuwa]1.4e-1744.25Show/hide
Query:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT
        M+++EG+  PVE V+EGP TRG   Q SP++R K+K  T ++  + RL +LE+ ME+VQ  + RLSE++E L+QEN EI++  K+MI+++  +F ++   
Subjt:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT

Query:  LSSEVANLRKFVE
        L+S V  L+ FVE
Subjt:  LSSEVANLRKFVE

KAA0067893.1 uncharacterized protein E6C27_scaffold138G00500 [Cucumis melo var. makuwa]9.7e-3268.14Show/hide
Query:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT
        MASQEGYE PVE VVEGPT RG T Q SPSKRPK K   +KDTT+  LA+LEE  E+VQ+ + RLS+DYEGL++ENVEISAA K++IKEI  SF RD N 
Subjt:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT

Query:  LSSEVANLRKFVE
        LS +VANL+KFVE
Subjt:  LSSEVANLRKFVE

KAE8637433.1 hypothetical protein CSA_004611, partial [Cucumis sativus]1.4e-1749.12Show/hide
Query:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT
        MAS+EGYE PVE VVEGPTTRG  AQ SPS++ KA  +T++D  E R A LE  +E VQ  +   SE  E L+ ++ E+S   K MI++++ S  +D + 
Subjt:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT

Query:  LSSEVANLRKFVEE
        L  EV N+RKF+EE
Subjt:  LSSEVANLRKFVEE

TYK04320.1 uncharacterized protein E5676_scaffold527G00540 [Cucumis melo var. makuwa]3.3e-3269.03Show/hide
Query:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT
        MASQEGYE PVE VVEGPT RG T Q SPSKRPK K   +KDTT+  LA+LEE  E+VQ+ + RLS+DYEGL++ENVEISAA K+MIKEI  SF RD N 
Subjt:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT

Query:  LSSEVANLRKFVE
        LS +VANL+KFVE
Subjt:  LSSEVANLRKFVE

TYK18079.1 uncharacterized protein E5676_scaffold306G004150 [Cucumis melo var. makuwa]1.4e-1744.25Show/hide
Query:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT
        M+++EG+  PVE V+EGP TRG   Q SP++R K+K  T ++  + RL +LE+ ME+VQ  + RLSE++E L+QEN EI++  K+MI+++  +F ++   
Subjt:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT

Query:  LSSEVANLRKFVE
        L+S V  L+ FVE
Subjt:  LSSEVANLRKFVE

TrEMBL top hitse value%identityAlignment
A0A5A7TFP3 Retrotrans_gag domain-containing protein6.6e-1844.25Show/hide
Query:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT
        M+++EG+  PVE V+EGP TRG   Q SP++R K+K  T ++  + RL +LE+ ME+VQ  + RLSE++E L+QEN EI++  K+MI+++  +F ++   
Subjt:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT

Query:  LSSEVANLRKFVE
        L+S V  L+ FVE
Subjt:  LSSEVANLRKFVE

A0A5A7VEX8 Polyprotein3.3e-1743.36Show/hide
Query:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT
        M+++EG+  PVE V+EGP TRG   Q SP++R K+K    ++  + RL +LE+ ME+VQ  + RLSE++E L+QEN EI++  K+MI+++  +F  +   
Subjt:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT

Query:  LSSEVANLRKFVE
        L+S V  L+ FVE
Subjt:  LSSEVANLRKFVE

A0A5A7VIG6 Uncharacterized protein4.7e-3268.14Show/hide
Query:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT
        MASQEGYE PVE VVEGPT RG T Q SPSKRPK K   +KDTT+  LA+LEE  E+VQ+ + RLS+DYEGL++ENVEISAA K++IKEI  SF RD N 
Subjt:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT

Query:  LSSEVANLRKFVE
        LS +VANL+KFVE
Subjt:  LSSEVANLRKFVE

A0A5D3BYX0 Uncharacterized protein1.6e-3269.03Show/hide
Query:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT
        MASQEGYE PVE VVEGPT RG T Q SPSKRPK K   +KDTT+  LA+LEE  E+VQ+ + RLS+DYEGL++ENVEISAA K+MIKEI  SF RD N 
Subjt:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT

Query:  LSSEVANLRKFVE
        LS +VANL+KFVE
Subjt:  LSSEVANLRKFVE

A0A5D3D3V4 Retrotrans_gag domain-containing protein6.6e-1844.25Show/hide
Query:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT
        M+++EG+  PVE V+EGP TRG   Q SP++R K+K  T ++  + RL +LE+ ME+VQ  + RLSE++E L+QEN EI++  K+MI+++  +F ++   
Subjt:  MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNT

Query:  LSSEVANLRKFVE
        L+S V  L+ FVE
Subjt:  LSSEVANLRKFVE

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCATCCCAAGAAGGATACGAGCCACCCGTTGAGCTAGTCGTTGAAGGGCCAACGACACGAGGATGTACTGCACAATGTTCTCCTTCCAAGCGACCCAAGGCGAAAGA
CACGACTTCGAAAGACACAACGGAAGCACGCTTAGCCCACTTGGAAGAATGTATGGAAAATGTGCAAGCTATGATCAGTAGGCTAAGTGAAGACTATGAGGGGTTAATCC
AGGAAAATGTCGAGATCAGCGCTGCTGTAAAAGATATGATCAAGGAGATCAAGTTGTCATTCGATAGAGATTTCAACACTTTATCAAGCGAAGTGGCCAACCTACGGAAA
TTCGTAGAGGAGAGACCTACGAATTACGTAAAGAGATCGAACGCATCCATGTCGAGTTCACTACTTATCGTGTTGCAACGAACGATCAGGCGTCGACCAACAACACGACA
GGCACACAGGAACGTGTGCAAAGGCAAGTTACACCCGAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCATCCCAAGAAGGATACGAGCCACCCGTTGAGCTAGTCGTTGAAGGGCCAACGACACGAGGATGTACTGCACAATGTTCTCCTTCCAAGCGACCCAAGGCGAAAGA
CACGACTTCGAAAGACACAACGGAAGCACGCTTAGCCCACTTGGAAGAATGTATGGAAAATGTGCAAGCTATGATCAGTAGGCTAAGTGAAGACTATGAGGGGTTAATCC
AGGAAAATGTCGAGATCAGCGCTGCTGTAAAAGATATGATCAAGGAGATCAAGTTGTCATTCGATAGAGATTTCAACACTTTATCAAGCGAAGTGGCCAACCTACGGAAA
TTCGTAGAGGAGAGACCTACGAATTACGTAAAGAGATCGAACGCATCCATGTCGAGTTCACTACTTATCGTGTTGCAACGAACGATCAGGCGTCGACCAACAACACGACA
GGCACACAGGAACGTGTGCAAAGGCAAGTTACACCCGAATTGA
Protein sequenceShow/hide protein sequence
MASQEGYEPPVELVVEGPTTRGCTAQCSPSKRPKAKDTTSKDTTEARLAHLEECMENVQAMISRLSEDYEGLIQENVEISAAVKDMIKEIKLSFDRDFNTLSSEVANLRK
FVEERPTNYVKRSNASMSSSLLIVLQRTIRRRPTTRQAHRNVCKGKLHPN