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PI0001861 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001861
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotran_gag_3 domain-containing protein
Genome locationchr02:18067067..18069147
RNA-Seq ExpressionPI0001861
SyntenyPI0001861
Gene Ontology termsGO:0005975 - carbohydrate metabolic process (biological process)
GO:0004553 - hydrolase activity, hydrolyzing O-glycosyl compounds (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0061282.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.3e-5277.78Show/hide
Query:  MAASSSESDLTPVIPTSTESSHLGNTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQ
        MA  SS+SDL        ESS   N  VPTST FLLSNICNLVPIRLDST+YVLWKYQVSSILKAHSLFGH++ +LPCP KHL S T   + EINPEYLQ
Subjt:  MAASSSESDLTPVIPTSTESSHLGNTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQ

Query:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEKQYSSNTRSNILDLR
        WLSRDQALITLIN TLSSSALAHVV SVSSK LWLSLEK+YSSNTRSNILDLR
Subjt:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEKQYSSNTRSNILDLR

KAA0067173.1 retrotransposon protein [Cucumis melo var. makuwa]2.1e-4664.37Show/hide
Query:  MAASSSESDLTPVIPTSTESSHLGNTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQ
        MA  SS+SDL+       ESS   N+FVPTST FLLSNICNLVPIRLDST+Y+LWKYQVSSILKAHS FGH++ +LPCP KHL+S T   + EINPEYLQ
Subjt:  MAASSSESDLTPVIPTSTESSHLGNTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQ

Query:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEKQYSSNTRSNILDLRKKPPLTNTPSSTLLPPQWSLF
        WLSR QALITLINATLSSSALAHVVGSVSSK LWLSLEK       +  + L  +  L +T +   LP  ++ F
Subjt:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEKQYSSNTRSNILDLRKKPPLTNTPSSTLLPPQWSLF

TYJ97594.1 putative mitochondrial protein [Cucumis melo var. makuwa]7.9e-4667.08Show/hide
Query:  MAASSSESDLTPVIPTSTESSHLGNTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQ
        MA  S +SDL+       ESS   N +VPTST FLLSNICNLVPIRLDST+YVLWKYQVSSILKAHSLFGH++ +LPCP KHL S T   + EINPEYLQ
Subjt:  MAASSSESDLTPVIPTSTESSHLGNTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQ

Query:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEKQYSSNTRSNILDLRKKPPLTNT
        WLSRDQALITLINATLSSSAL HVVGSV+SK LWLSLEK       +  + L+ +  L +T
Subjt:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEKQYSSNTRSNILDLRKKPPLTNT

TYK11141.1 putative mitochondrial protein [Cucumis melo var. makuwa]1.1e-5050.74Show/hide
Query:  NTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQWLSRDQALITLINATLSSSALAHV
        N  VPTST FLLSNICNLVPIRLDST+YVLWKYQVSSILKAHSLFGH++ +LPCP KH  S T   + EINPEY+QWLSRDQALITLINATLSSSALAHV
Subjt:  NTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQWLSRDQALITLINATLSSSALAHV

Query:  VGSVSSKDLWLSLEKQYSSNTRSNILDLRKKP-------------PLTNTPSS---------------------TLLPPQWSLFIPL-------TLMAA-
        VGSVSSK LWLSLEK+YSSN RSNILDL                  L   P++                     TLL P+ +            T MAA 
Subjt:  VGSVSSKDLWLSLEKQYSSNTRSNILDLRKKP-------------PLTNTPSS---------------------TLLPPQWSLFIPL-------TLMAA-

Query:  -------------------------------------------DEEDEMDKVSGRTLYTGESINGLYPIP
                                                      +  DKV+GRTLYTGESINGLYPIP
Subjt:  -------------------------------------------DEEDEMDKVSGRTLYTGESINGLYPIP

XP_016902970.1 PREDICTED: uncharacterized protein LOC107991968 [Cucumis melo]1.6e-4670Show/hide
Query:  TESSHLGNTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQWLSRDQALITLINATLS
        +E     N  +PTST FLLS+ICNLVPIRLDST+YVLWKYQVSSILKA+S FGH++ +LPCP KHL   T   + +INPEYLQWLS DQALITLIN TLS
Subjt:  TESSHLGNTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQWLSRDQALITLINATLS

Query:  SSALAHVVGSVSSKDLWLSLEKQYSSNTRSNILDLRKK-PPLTNTPSSTL
        SSALA+VVGSVSSK LWLSLEK+YSSNT+SNILDL      L  TPS ++
Subjt:  SSALAHVVGSVSSKDLWLSLEKQYSSNTRSNILDLRKK-PPLTNTPSSTL

TrEMBL top hitse value%identityAlignment
A0A1S4E4S1 uncharacterized protein LOC1079919687.7e-4770Show/hide
Query:  TESSHLGNTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQWLSRDQALITLINATLS
        +E     N  +PTST FLLS+ICNLVPIRLDST+YVLWKYQVSSILKA+S FGH++ +LPCP KHL   T   + +INPEYLQWLS DQALITLIN TLS
Subjt:  TESSHLGNTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQWLSRDQALITLINATLS

Query:  SSALAHVVGSVSSKDLWLSLEKQYSSNTRSNILDLRKK-PPLTNTPSSTL
        SSALA+VVGSVSSK LWLSLEK+YSSNT+SNILDL      L  TPS ++
Subjt:  SSALAHVVGSVSSKDLWLSLEKQYSSNTRSNILDLRKK-PPLTNTPSSTL

A0A5A7T8B0 Retrotransposon protein7.7e-4770Show/hide
Query:  TESSHLGNTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQWLSRDQALITLINATLS
        +E     N  +PTST FLLS+ICNLVPIRLDST+YVLWKYQVSSILKA+S FGH++ +LPCP KHL   T   + +INPEYLQWLS DQALITLIN TLS
Subjt:  TESSHLGNTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQWLSRDQALITLINATLS

Query:  SSALAHVVGSVSSKDLWLSLEKQYSSNTRSNILDLRKK-PPLTNTPSSTL
        SSALA+VVGSVSSK LWLSLEK+YSSNT+SNILDL      L  TPS ++
Subjt:  SSALAHVVGSVSSKDLWLSLEKQYSSNTRSNILDLRKK-PPLTNTPSSTL

A0A5A7UZE5 Putative mitochondrial protein1.6e-5277.78Show/hide
Query:  MAASSSESDLTPVIPTSTESSHLGNTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQ
        MA  SS+SDL        ESS   N  VPTST FLLSNICNLVPIRLDST+YVLWKYQVSSILKAHSLFGH++ +LPCP KHL S T   + EINPEYLQ
Subjt:  MAASSSESDLTPVIPTSTESSHLGNTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQ

Query:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEKQYSSNTRSNILDLR
        WLSRDQALITLIN TLSSSALAHVV SVSSK LWLSLEK+YSSNTRSNILDLR
Subjt:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEKQYSSNTRSNILDLR

A0A5A7VGG0 Retrotransposon protein1.0e-4664.37Show/hide
Query:  MAASSSESDLTPVIPTSTESSHLGNTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQ
        MA  SS+SDL+       ESS   N+FVPTST FLLSNICNLVPIRLDST+Y+LWKYQVSSILKAHS FGH++ +LPCP KHL+S T   + EINPEYLQ
Subjt:  MAASSSESDLTPVIPTSTESSHLGNTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQ

Query:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEKQYSSNTRSNILDLRKKPPLTNTPSSTLLPPQWSLF
        WLSR QALITLINATLSSSALAHVVGSVSSK LWLSLEK       +  + L  +  L +T +   LP  ++ F
Subjt:  WLSRDQALITLINATLSSSALAHVVGSVSSKDLWLSLEKQYSSNTRSNILDLRKKPPLTNTPSSTLLPPQWSLF

A0A5D3CH60 Putative mitochondrial protein5.1e-5150.74Show/hide
Query:  NTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQWLSRDQALITLINATLSSSALAHV
        N  VPTST FLLSNICNLVPIRLDST+YVLWKYQVSSILKAHSLFGH++ +LPCP KH  S T   + EINPEY+QWLSRDQALITLINATLSSSALAHV
Subjt:  NTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQWLSRDQALITLINATLSSSALAHV

Query:  VGSVSSKDLWLSLEKQYSSNTRSNILDLRKKP-------------PLTNTPSS---------------------TLLPPQWSLFIPL-------TLMAA-
        VGSVSSK LWLSLEK+YSSN RSNILDL                  L   P++                     TLL P+ +            T MAA 
Subjt:  VGSVSSKDLWLSLEKQYSSNTRSNILDLRKKP-------------PLTNTPSS---------------------TLLPPQWSLFIPL-------TLMAA-

Query:  -------------------------------------------DEEDEMDKVSGRTLYTGESINGLYPIP
                                                      +  DKV+GRTLYTGESINGLYPIP
Subjt:  -------------------------------------------DEEDEMDKVSGRTLYTGESINGLYPIP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTGCCTCCAGCTCAGAATCTGACCTCACCCCAGTCATCCCAACCTCCACCGAATCATCACATTTAGGCAATACCTTTGTCCCTACTTCCACTTTCTTCTTACTATC
CAATATTTGCAATCTTGTACCTATTCGTTTAGATTCCACCAGTTACGTTCTCTGGAAGTATCAAGTCTCCTCTATTCTCAAAGCACACTCTCTTTTTGGCCACCTTAATA
AATCCCTGCCCTGCCCATCCAAACATCTTGCCTCACCCACCCCTGATGCCCACCCAGAAATTAATCCAGAATATCTCCAATGGCTTTCTCGTGACCAAGCCCTCATAACT
CTCATCAACGCTACGTTATCGTCCTCTGCCCTTGCCCATGTAGTCGGTTCTGTCTCTTCCAAAGATTTATGGCTTTCTCTTGAAAAACAATACTCCTCCAACACCAGATC
CAACATTCTTGATTTAAGAAAGAAACCACCATTAACAAACACGCCGTCGTCGACCCTACTCCCACCGCAATGGTCGCTTTTCATCCCTCTCACACTCATGGCCGCGGACG
AGGAAGACGAAATGGATAAAGTCTCTGGCAGAACTTTATATACTGGTGAAAGCATCAATGGCCTCTATCCAATTCCTAGTACTTCTACTCTATCCACTTCTACTATGCAT
CCCAAAACCTTTAATTTTCATGCAAAACAGGAGGATTCATCTGTAACGACCACAAGTTCAAGCTTCTTTAAGCCACCGCGCAGCTCTCCTCCTCCCCAGTCTTTGTTGCG
CCGCGCCTTGCTTCGTCGTTCTAGAAGTTCGCTGTCTTTCCTTGCCGCCGGGGAGAAGCTTTTGGTTGTTGCCGAAGCGTTCTGGGTTGCGTTTTCGCGAAGTGTGGTGG
TGTGGAGGAGCTTCCTTGTTCTTTCCCGTTCGTTTAGTCTTCTCTGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTGCCTCCAGCTCAGAATCTGACCTCACCCCAGTCATCCCAACCTCCACCGAATCATCACATTTAGGCAATACCTTTGTCCCTACTTCCACTTTCTTCTTACTATC
CAATATTTGCAATCTTGTACCTATTCGTTTAGATTCCACCAGTTACGTTCTCTGGAAGTATCAAGTCTCCTCTATTCTCAAAGCACACTCTCTTTTTGGCCACCTTAATA
AATCCCTGCCCTGCCCATCCAAACATCTTGCCTCACCCACCCCTGATGCCCACCCAGAAATTAATCCAGAATATCTCCAATGGCTTTCTCGTGACCAAGCCCTCATAACT
CTCATCAACGCTACGTTATCGTCCTCTGCCCTTGCCCATGTAGTCGGTTCTGTCTCTTCCAAAGATTTATGGCTTTCTCTTGAAAAACAATACTCCTCCAACACCAGATC
CAACATTCTTGATTTAAGAAAGAAACCACCATTAACAAACACGCCGTCGTCGACCCTACTCCCACCGCAATGGTCGCTTTTCATCCCTCTCACACTCATGGCCGCGGACG
AGGAAGACGAAATGGATAAAGTCTCTGGCAGAACTTTATATACTGGTGAAAGCATCAATGGCCTCTATCCAATTCCTAGTACTTCTACTCTATCCACTTCTACTATGCAT
CCCAAAACCTTTAATTTTCATGCAAAACAGGAGGATTCATCTGTAACGACCACAAGTTCAAGCTTCTTTAAGCCACCGCGCAGCTCTCCTCCTCCCCAGTCTTTGTTGCG
CCGCGCCTTGCTTCGTCGTTCTAGAAGTTCGCTGTCTTTCCTTGCCGCCGGGGAGAAGCTTTTGGTTGTTGCCGAAGCGTTCTGGGTTGCGTTTTCGCGAAGTGTGGTGG
TGTGGAGGAGCTTCCTTGTTCTTTCCCGTTCGTTTAGTCTTCTCTGGTAA
Protein sequenceShow/hide protein sequence
MAASSSESDLTPVIPTSTESSHLGNTFVPTSTFFLLSNICNLVPIRLDSTSYVLWKYQVSSILKAHSLFGHLNKSLPCPSKHLASPTPDAHPEINPEYLQWLSRDQALIT
LINATLSSSALAHVVGSVSSKDLWLSLEKQYSSNTRSNILDLRKKPPLTNTPSSTLLPPQWSLFIPLTLMAADEEDEMDKVSGRTLYTGESINGLYPIPSTSTLSTSTMH
PKTFNFHAKQEDSSVTTTSSSFFKPPRSSPPPQSLLRRALLRRSRSSLSFLAAGEKLLVVAEAFWVAFSRSVVVWRSFLVLSRSFSLLW