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PI0001864 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001864
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr04:28959557..28960023
RNA-Seq ExpressionPI0001864
SyntenyPI0001864
Gene Ontology termsGO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025264.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.1e-0978.26Show/hide
Query:  GSPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGS
        GSPSVV AAT SDIT P + QL DL+DLLKQVISSN+TALAVTPG+
Subjt:  GSPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGS
KAA0047794.1 putative mitochondrial protein [Cucumis melo var. makuwa]3.1e-0874.47Show/hide
Query:  MGSPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGS
        +GS SVVAAATSSDIT P + QL DL+DLLKQV+SS +TALAVTPG+
Subjt:  MGSPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGS
TYK07403.1 putative mitochondrial protein [Cucumis melo var. makuwa]6.1e-0978.26Show/hide
Query:  GSPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGS
        GSPSVV AAT SDIT P + QL DL+DLLKQVISSN+TALAVTPG+
Subjt:  GSPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGS
XP_008445037.1 PREDICTED: uncharacterized protein LOC103488200 [Cucumis melo]6.8e-1675Show/hide
Query:  GSPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGSGSTNRTSDWYGMEGGAII
        GS SVVAAATSSDIT P + QL DL+DLLKQVISS +TALAVTPGSG ++ TSDW+G EGG+II
Subjt:  GSPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGSGSTNRTSDWYGMEGGAII
XP_031739694.1 uncharacterized protein LOC105434738 [Cucumis sativus]1.1e-1880.95Show/hide
Query:  SPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGSGSTNRTSDWYGMEGGAII
        SP +VAAAT SDITTP NFQLNDL+DLLKQVISSN+TALAVTPGSG +N  SDWYG EGG II
Subjt:  SPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGSGSTNRTSDWYGMEGGAII
TrEMBL top hitse value%identityAlignment
A0A1S3BBA1 uncharacterized protein LOC1034882003.3e-1675Show/hide
Query:  GSPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGSGSTNRTSDWYGMEGGAII
        GS SVVAAATSSDIT P + QL DL+DLLKQVISS +TALAVTPGSG ++ TSDW+G EGG+II
Subjt:  GSPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGSGSTNRTSDWYGMEGGAII
A0A5A7SI05 Putative mitochondrial protein3.0e-0978.26Show/hide
Query:  GSPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGS
        GSPSVV AAT SDIT P + QL DL+DLLKQVISSN+TALAVTPG+
Subjt:  GSPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGS
A0A5A7TXR0 Putative mitochondrial protein1.5e-0874.47Show/hide
Query:  MGSPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGS
        +GS SVVAAATSSDIT P + QL DL+DLLKQV+SS +TALAVTPG+
Subjt:  MGSPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGS
A0A5A7UST7 Putative mitochondrial protein3.3e-0876.09Show/hide
Query:  GSPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGS
        GS SVVA ATSSDIT P + QL DL+DLLKQVISS +TALAVTPG+
Subjt:  GSPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGS
A0A5D3C669 Putative mitochondrial protein3.0e-0978.26Show/hide
Query:  GSPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGS
        GSPSVV AAT SDIT P + QL DL+DLLKQVISSN+TALAVTPG+
Subjt:  GSPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTTCTCCATCTGTTGTGGCTGCCGCCACCTCATCTGACATCACCACACCTCCAAACTTTCAGTTAAATGATCTCTATGACTTACTAAAACAGGTGATCTCTTCCAA
CACTACTGCCCTTGCTGTCACCCCAGGTTCAGGATCCACAAACAGGACAAGTGATTGGTACGGGATGGAAGGTGGGGCGATTATTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGTTCTCCATCTGTTGTGGCTGCCGCCACCTCATCTGACATCACCACACCTCCAAACTTTCAGTTAAATGATCTCTATGACTTACTAAAACAGGTGATCTCTTCCAA
CACTACTGCCCTTGCTGTCACCCCAGGTTCAGGATCCACAAACAGGACAAGTGATTGGTACGGGATGGAAGGTGGGGCGATTATTTGA
Protein sequenceShow/hide protein sequence
MGSPSVVAAATSSDITTPPNFQLNDLYDLLKQVISSNTTALAVTPGSGSTNRTSDWYGMEGGAII