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PI0001875 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001875
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionZinc finger, C3HC4 type family protein
Genome locationchr12:23172691..23173660
RNA-Seq ExpressionPI0001875
SyntenyPI0001875
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KGN66041.2 hypothetical protein Csa_019677 [Cucumis sativus]1.7e-3464.03Show/hide
Query:  MAAKVGCSPAR---------------------------------NRRFSLYYSPI-----ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSP-
        MAAKVGCSPA                                  N+   LY + I     ERLLG ALGSVFAGVVVFEQRKSLY+SISENYPPATQSP 
Subjt:  MAAKVGCSPAR---------------------------------NRRFSLYYSPI-----ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSP-

Query:  -MRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
         MRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
Subjt:  -MRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW

XP_004152895.1 uncharacterized protein LOC101206005 isoform X2 [Cucumis sativus]9.9e-3597.4Show/hide
Query:  ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        ERLLG ALGSVFAGVVVFEQRKSLY+SISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
Subjt:  ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW

XP_008457526.1 PREDICTED: uncharacterized protein LOC103497197 isoform X2 [Cucumis melo]6.4e-3494.81Show/hide
Query:  ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        ERLLG ALGS FAGVVVFEQRKSLY+SISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGP+IQALSSRGW
Subjt:  ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW

XP_022156577.1 uncharacterized protein LOC111023455 [Momordica charantia]8.4e-3494.81Show/hide
Query:  ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPA QSPMRKPV+AKKYGPE SHLWNRAVDQTFGP+IQALSSRGW
Subjt:  ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW

XP_023519919.1 uncharacterized protein LOC111783242 [Cucurbita pepo subsp. pepo]1.1e-3394.81Show/hide
Query:  ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        ERLLGAALGSVFAGVVVFEQRKSLY SIS+NYPP TQSPMRKPVLAKKYGPEFSHLWN AVDQTFGPVIQALSSRGW
Subjt:  ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW

TrEMBL top hitse value%identityAlignment
A0A0A0LXB2 Uncharacterized protein2.6e-3664.96Show/hide
Query:  MAAKVGCSPAR---------------------------------NRRFSLYYSPI-----ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPM
        MAAKVGCSPA                                  N+   LY + I     ERLLG ALGSVFAGVVVFEQRKSLY+SISENYPPATQSPM
Subjt:  MAAKVGCSPAR---------------------------------NRRFSLYYSPI-----ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPM

Query:  RKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        RKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
Subjt:  RKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW

A0A1S3C5P6 uncharacterized protein LOC103497197 isoform X23.1e-3494.81Show/hide
Query:  ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        ERLLG ALGS FAGVVVFEQRKSLY+SISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGP+IQALSSRGW
Subjt:  ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW

A0A5D3BR76 Uncharacterized protein3.1e-3494.81Show/hide
Query:  ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        ERLLG ALGS FAGVVVFEQRKSLY+SISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGP+IQALSSRGW
Subjt:  ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW

A0A6J1DSC3 uncharacterized protein LOC1110234554.1e-3494.81Show/hide
Query:  ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPA QSPMRKPV+AKKYGPE SHLWNRAVDQTFGP+IQALSSRGW
Subjt:  ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW

A0A6J1HZ79 uncharacterized protein LOC1114694469.1e-3494.81Show/hide
Query:  ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        ERLLGAALGSVFAGVVVFEQRKSLY SIS+NYPP TQSPMRKPVLAKKYGPEFSHLWN AVDQTFGPVIQALSSRGW
Subjt:  ERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT2G28430.1 unknown protein4.2e-1550Show/hide
Query:  ERLLGAALGSVFAGVVVFEQRKSLYRSISE-NYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW
        ERLLG  LGS   G +VFEQRK ++ S+S+       Q+ +   +  KKY  EF+ LWN+AVDQTF P I+ LSSR W
Subjt:  ERLLGAALGSVFAGVVVFEQRKSLYRSISE-NYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCAAAAGTTGGGTGCAGCCCCGCCAGGAACCGAAGGTTCTCTCTTTACTATAGCCCAATCGAGCGACTGCTTGGTGCTGCATTGGGGAGTGTGTTCGCCGGGGT
TGTTGTTTTTGAGCAACGGAAAAGCTTATACCGATCCATTTCCGAAAACTATCCACCAGCAACCCAATCTCCGATGAGAAAACCTGTACTAGCAAAGAAGTATGGCCCAG
AGTTTTCGCACCTATGGAATAGAGCTGTAGACCAGACGTTTGGACCCGTGATTCAGGCACTCAGTTCACGGGGATGGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCAAAAGTTGGGTGCAGCCCCGCCAGGAACCGAAGGTTCTCTCTTTACTATAGCCCAATCGAGCGACTGCTTGGTGCTGCATTGGGGAGTGTGTTCGCCGGGGT
TGTTGTTTTTGAGCAACGGAAAAGCTTATACCGATCCATTTCCGAAAACTATCCACCAGCAACCCAATCTCCGATGAGAAAACCTGTACTAGCAAAGAAGTATGGCCCAG
AGTTTTCGCACCTATGGAATAGAGCTGTAGACCAGACGTTTGGACCCGTGATTCAGGCACTCAGTTCACGGGGATGGTGA
Protein sequenceShow/hide protein sequence
MAAKVGCSPARNRRFSLYYSPIERLLGAALGSVFAGVVVFEQRKSLYRSISENYPPATQSPMRKPVLAKKYGPEFSHLWNRAVDQTFGPVIQALSSRGW