; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0001882 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001882
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon gag protein
Genome locationchr04:18093026..18094216
RNA-Seq ExpressionPI0001882
SyntenyPI0001882
Gene Ontology termsNA
InterPro domainsIPR005162 - Retrotransposon gag domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031967.1 retrotransposon gag protein [Cucumis melo var. makuwa]1.3e-17879.7Show/hide
Query:  MGQVREKTLRELSEPNEDQRPLCIVIPPTTQPFKLKPGVIHLLPIYKGSSGEDPHKHLKDFHMVCDSMRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEP
        MG+VREKT+R+L E +EDQRPLCIVI  TTQPF+LKP +IHLLPI+KG+SGEDPHKHLKDFHMVCDSMR HG+S+EQLNLRAFPFSLTD AKRWLYYLEP
Subjt:  MGQVREKTLRELSEPNEDQRPLCIVIPPTTQPFKLKPGVIHLLPIYKGSSGEDPHKHLKDFHMVCDSMRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEP

Query:  GSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTEAREL
        GSITTWGSLKKKFLEKFFP SR NNIRKEIYGIRQAFGESL +YWE+FKELCA+FPHHHI  PSLIQYFY GLL+ DRNTVDAAAGGALA+K PTEAREL
Subjt:  GSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTEAREL

Query:  ISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWG
        ISRMA NS  FGNRASEL+NSLTKEVSELKSQM+NMTTLLTSFVQG  +KV KC VCGLVGHPNDK P+++EE N+++KYDP+SNTYN GWRDNP LRWG
Subjt:  ISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWG

Query:  NDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANVSVISLRNGKILETLSSKE-KVTSIPYP
        NDNQ+ +QA ++S+NQ TNL+D++KALAT T+SFQ EMKQQM+ LT  ISK++GKGKL AQ +HANVSVISLR+GKIL+T S+KE KVTSIP P
Subjt:  NDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANVSVISLRNGKILETLSSKE-KVTSIPYP

KAA0056713.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.1e-14470.82Show/hide
Query:  MGQVREKTLRELSEPNEDQRPLCIVIPPTTQPFKLKPGVIHLLPIYKGSSGEDPHKHLKDFHMVCDSMRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEP
        MG+VREKTL+EL +P+EDQRPLCIVIPPTTQPF+LK G+IHLLPI+KG                                           KRWLYYLEP
Subjt:  MGQVREKTLRELSEPNEDQRPLCIVIPPTTQPFKLKPGVIHLLPIYKGSSGEDPHKHLKDFHMVCDSMRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEP

Query:  GSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTEAREL
        GSITTWGSLKKKFLEKFFP S+ANNIRKEIYGIRQAFGESLS YWERFKELCASFP  HIS+PSLIQYFYSGLL+ D+NTVDAAAGGALADKTP EA+EL
Subjt:  GSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTEAREL

Query:  ISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWG
        ISRMA NS +FGNRASEL NSLTKEVSE+KSQM+NMTTLLTSFVQG  +KV KCGV G VGHPNDK P+++E+ N+++KYDPH NTYN+GWRDNPNLRWG
Subjt:  ISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWG

Query:  NDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANVSVISLRNGKI
        NDNQ  +QA  +S+NQGTNLE ++KALAT T SFQ EMKQQ++ LT AISK++GKGKLLAQ DHANVS ISLR+  I
Subjt:  NDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANVSVISLRNGKI

KAA0058150.1 uncharacterized protein E6C27_scaffold274G004630 [Cucumis melo var. makuwa]4.1e-15671.5Show/hide
Query:  MGQVREKTLRELSEPNEDQRPLCIVIPPTTQPFKLKPGVIHLLPIYKGSSGEDPHKHLKDFHMVCDSMRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEP
        MG+VREK LREL+EPNED RPLCIVIPPTTQPF+LKPG+IHLLPI+KGSSGEDPHKHLKDFHMVCDSMR + +S+EQLNLRAFPF LTD AK WLYYLEP
Subjt:  MGQVREKTLRELSEPNEDQRPLCIVIPPTTQPFKLKPGVIHLLPIYKGSSGEDPHKHLKDFHMVCDSMRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEP

Query:  GSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTEAREL
        GSITTWGSLKKKFLEKFFP SRANNIRKEIYGIRQAFGESLS+YWERFKELCAS PH+HI DPSLIQYFYSGLL+ DRNTVDAA GGALADKTPTEAR+L
Subjt:  GSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTEAREL

Query:  ISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWG
        ISRM  NS +FGNRASELDNSLTKEVSELKSQM+NMTTLLTSFVQG  +KV KCGVCGLVGHPNDK P+++E+ N++R+YDPH                 
Subjt:  ISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWG

Query:  NDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANVSVISLRNGKILETLSS-----KEKVTSIPYPSR
                        GTNLED++KALAT T+SFQ EMKQQM+ LT AISK++GKGKL AQ DHAN  +    +  IL+   S        +   P+PSR
Subjt:  NDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANVSVISLRNGKILETLSS-----KEKVTSIPYPSR

KAA0061138.1 retrotransposon gag protein [Cucumis melo var. makuwa]2.3e-14680.25Show/hide
Query:  MRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQ
        MR HG+SKEQLNLRAFPFSLTD AKRWLYY+EPGSITTWGSLKKKFLEKFFP SRANNIRKEIYGIRQAFGESLS+YW+R KELCASFPHHHISDPSLIQ
Subjt:  MRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQ

Query:  YFYSGLLTMDRNTVDAAAGGALADKTPTEARELISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKY
        YF+SGLL+ DRNT+D  AGGALADKTPTEARELISRM  NS +FGNRASELDNSLTKEVSELKSQM+NMTTLLTSFVQG   KV KCGVCGLVGHPNDK 
Subjt:  YFYSGLLTMDRNTVDAAAGGALADKTPTEARELISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKY

Query:  PDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANV
          ++E+ N++R+YDPHSNTYN+GWRDNPNLRWGNDNQ+ +QA S+S+NQGTNLED++KAL T T+SFQ EMKQQM+ LT AISK++GKGKL AQ D+ANV
Subjt:  PDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANV

Query:  SVISLRNGKILETLSSKEKVTSIP
        S ISLR+GKIL+T ++KEK    P
Subjt:  SVISLRNGKILETLSSKEKVTSIP

TYK10613.1 retrotransposon gag protein [Cucumis melo var. makuwa]7.5e-14268.91Show/hide
Query:  MGQVREKTLRELSEPNEDQRPLCIVIPPTTQPFKLKPGVIHLLPIYKGSSGEDPHKHLKDFHMVCDSMRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEP
        MG+VREKTLREL+EP+EDQRPLCIVIPPTTQPF+LK G+IHLLPI+KG                                                  +P
Subjt:  MGQVREKTLRELSEPNEDQRPLCIVIPPTTQPFKLKPGVIHLLPIYKGSSGEDPHKHLKDFHMVCDSMRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEP

Query:  GSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTEAREL
         SITTWGSLKKKFLEKFF  SRANNIRKEIYGIRQAF ESLSEYWERFKELCASFPHHHI DPSL QYFYSGLL+ DRNTVDA AG ALADKTPTEA EL
Subjt:  GSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTEAREL

Query:  ISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWG
        ISRMA N  +FGNRAS+L+N LTKEVSELKS+M+NMTTLLTSFVQG   KV KCGVCGLVGHPNDK P+++E+ N++R+YDPH NTYN GWRD PNLRWG
Subjt:  ISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWG

Query:  NDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANVSVISLRNGKILETLSSKEK
        ND Q  +QA S+S+NQGTNLED++KAL T T+SFQ EMKQQM+ LT AISK++GKGKL AQ DHANVS ISLR+GKIL+T ++KEK
Subjt:  NDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANVSVISLRNGKILETLSSKEK

TrEMBL top hitse value%identityAlignment
A0A5A7SRF5 Retrotransposon gag protein6.3e-17979.7Show/hide
Query:  MGQVREKTLRELSEPNEDQRPLCIVIPPTTQPFKLKPGVIHLLPIYKGSSGEDPHKHLKDFHMVCDSMRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEP
        MG+VREKT+R+L E +EDQRPLCIVI  TTQPF+LKP +IHLLPI+KG+SGEDPHKHLKDFHMVCDSMR HG+S+EQLNLRAFPFSLTD AKRWLYYLEP
Subjt:  MGQVREKTLRELSEPNEDQRPLCIVIPPTTQPFKLKPGVIHLLPIYKGSSGEDPHKHLKDFHMVCDSMRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEP

Query:  GSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTEAREL
        GSITTWGSLKKKFLEKFFP SR NNIRKEIYGIRQAFGESL +YWE+FKELCA+FPHHHI  PSLIQYFY GLL+ DRNTVDAAAGGALA+K PTEAREL
Subjt:  GSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTEAREL

Query:  ISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWG
        ISRMA NS  FGNRASEL+NSLTKEVSELKSQM+NMTTLLTSFVQG  +KV KC VCGLVGHPNDK P+++EE N+++KYDP+SNTYN GWRDNP LRWG
Subjt:  ISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWG

Query:  NDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANVSVISLRNGKILETLSSKE-KVTSIPYP
        NDNQ+ +QA ++S+NQ TNL+D++KALAT T+SFQ EMKQQM+ LT  ISK++GKGKL AQ +HANVSVISLR+GKIL+T S+KE KVTSIP P
Subjt:  NDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANVSVISLRNGKILETLSSKE-KVTSIPYP

A0A5A7ULC7 Retrotransposon gag protein1.0e-14470.82Show/hide
Query:  MGQVREKTLRELSEPNEDQRPLCIVIPPTTQPFKLKPGVIHLLPIYKGSSGEDPHKHLKDFHMVCDSMRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEP
        MG+VREKTL+EL +P+EDQRPLCIVIPPTTQPF+LK G+IHLLPI+KG                                           KRWLYYLEP
Subjt:  MGQVREKTLRELSEPNEDQRPLCIVIPPTTQPFKLKPGVIHLLPIYKGSSGEDPHKHLKDFHMVCDSMRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEP

Query:  GSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTEAREL
        GSITTWGSLKKKFLEKFFP S+ANNIRKEIYGIRQAFGESLS YWERFKELCASFP  HIS+PSLIQYFYSGLL+ D+NTVDAAAGGALADKTP EA+EL
Subjt:  GSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTEAREL

Query:  ISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWG
        ISRMA NS +FGNRASEL NSLTKEVSE+KSQM+NMTTLLTSFVQG  +KV KCGV G VGHPNDK P+++E+ N+++KYDPH NTYN+GWRDNPNLRWG
Subjt:  ISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWG

Query:  NDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANVSVISLRNGKI
        NDNQ  +QA  +S+NQGTNLE ++KALAT T SFQ EMKQQ++ LT AISK++GKGKLLAQ DHANVS ISLR+  I
Subjt:  NDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANVSVISLRNGKI

A0A5A7USL5 Retrotrans_gag domain-containing protein2.0e-15671.5Show/hide
Query:  MGQVREKTLRELSEPNEDQRPLCIVIPPTTQPFKLKPGVIHLLPIYKGSSGEDPHKHLKDFHMVCDSMRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEP
        MG+VREK LREL+EPNED RPLCIVIPPTTQPF+LKPG+IHLLPI+KGSSGEDPHKHLKDFHMVCDSMR + +S+EQLNLRAFPF LTD AK WLYYLEP
Subjt:  MGQVREKTLRELSEPNEDQRPLCIVIPPTTQPFKLKPGVIHLLPIYKGSSGEDPHKHLKDFHMVCDSMRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEP

Query:  GSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTEAREL
        GSITTWGSLKKKFLEKFFP SRANNIRKEIYGIRQAFGESLS+YWERFKELCAS PH+HI DPSLIQYFYSGLL+ DRNTVDAA GGALADKTPTEAR+L
Subjt:  GSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTEAREL

Query:  ISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWG
        ISRM  NS +FGNRASELDNSLTKEVSELKSQM+NMTTLLTSFVQG  +KV KCGVCGLVGHPNDK P+++E+ N++R+YDPH                 
Subjt:  ISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWG

Query:  NDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANVSVISLRNGKILETLSS-----KEKVTSIPYPSR
                        GTNLED++KALAT T+SFQ EMKQQM+ LT AISK++GKGKL AQ DHAN  +    +  IL+   S        +   P+PSR
Subjt:  NDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANVSVISLRNGKILETLSS-----KEKVTSIPYPSR

A0A5A7V0Q7 Retrotransposon gag protein1.1e-14680.25Show/hide
Query:  MRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQ
        MR HG+SKEQLNLRAFPFSLTD AKRWLYY+EPGSITTWGSLKKKFLEKFFP SRANNIRKEIYGIRQAFGESLS+YW+R KELCASFPHHHISDPSLIQ
Subjt:  MRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQ

Query:  YFYSGLLTMDRNTVDAAAGGALADKTPTEARELISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKY
        YF+SGLL+ DRNT+D  AGGALADKTPTEARELISRM  NS +FGNRASELDNSLTKEVSELKSQM+NMTTLLTSFVQG   KV KCGVCGLVGHPNDK 
Subjt:  YFYSGLLTMDRNTVDAAAGGALADKTPTEARELISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKY

Query:  PDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANV
          ++E+ N++R+YDPHSNTYN+GWRDNPNLRWGNDNQ+ +QA S+S+NQGTNLED++KAL T T+SFQ EMKQQM+ LT AISK++GKGKL AQ D+ANV
Subjt:  PDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANV

Query:  SVISLRNGKILETLSSKEKVTSIP
        S ISLR+GKIL+T ++KEK    P
Subjt:  SVISLRNGKILETLSSKEKVTSIP

A0A5D3CFE7 Retrotransposon gag protein3.6e-14268.91Show/hide
Query:  MGQVREKTLRELSEPNEDQRPLCIVIPPTTQPFKLKPGVIHLLPIYKGSSGEDPHKHLKDFHMVCDSMRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEP
        MG+VREKTLREL+EP+EDQRPLCIVIPPTTQPF+LK G+IHLLPI+KG                                                  +P
Subjt:  MGQVREKTLRELSEPNEDQRPLCIVIPPTTQPFKLKPGVIHLLPIYKGSSGEDPHKHLKDFHMVCDSMRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEP

Query:  GSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTEAREL
         SITTWGSLKKKFLEKFF  SRANNIRKEIYGIRQAF ESLSEYWERFKELCASFPHHHI DPSL QYFYSGLL+ DRNTVDA AG ALADKTPTEA EL
Subjt:  GSITTWGSLKKKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTEAREL

Query:  ISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWG
        ISRMA N  +FGNRAS+L+N LTKEVSELKS+M+NMTTLLTSFVQG   KV KCGVCGLVGHPNDK P+++E+ N++R+YDPH NTYN GWRD PNLRWG
Subjt:  ISRMAGNSLNFGNRASELDNSLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWG

Query:  NDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANVSVISLRNGKILETLSSKEK
        ND Q  +QA S+S+NQGTNLED++KAL T T+SFQ EMKQQM+ LT AISK++GKGKL AQ DHANVS ISLR+GKIL+T ++KEK
Subjt:  NDNQRPSQATSSSNNQGTNLEDLVKALATITISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANVSVISLRNGKILETLSSKEK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGCAAGTTAGAGAGAAAACCTTAAGAGAGCTTTCCGAGCCTAACGAGGACCAAAGGCCCCTCTGCATTGTAATTCCCCCAACCACTCAACCCTTCAAACTCAAACC
TGGAGTAATCCATCTCTTACCTATATACAAGGGTAGTTCAGGAGAGGACCCCCATAAACACCTCAAAGACTTTCATATGGTTTGTGACTCAATGAGACTGCACGGTGTTT
CAAAGGAACAACTTAACTTGAGAGCCTTTCCATTTTCTTTGACTGACACAGCCAAAAGATGGCTTTACTACCTAGAGCCAGGGTCCATCACCACTTGGGGAAGCCTTAAA
AAGAAATTCCTAGAAAAATTCTTTCCTACTTCTAGAGCCAATAATATTAGGAAAGAAATCTATGGAATAAGGCAAGCTTTTGGGGAGTCCTTGTCTGAATACTGGGAAAG
GTTTAAGGAGCTCTGCGCTAGTTTCCCCCATCACCATATTTCTGATCCATCACTAATACAATATTTCTATTCTGGACTACTAACTATGGATAGAAATACAGTAGACGCTG
CAGCAGGTGGTGCATTGGCTGACAAAACCCCTACTGAGGCTAGAGAGCTCATTTCGAGGATGGCTGGAAATTCATTGAACTTTGGGAACAGAGCATCCGAGCTCGACAAT
TCATTGACTAAGGAGGTAAGTGAACTCAAATCACAAATGGTTAATATGACTACTTTACTAACTTCCTTTGTTCAAGGTGGATCCGTTAAAGTTGCAAAGTGTGGGGTGTG
CGGTCTAGTCGGACATCCTAATGACAAGTACCCTGACTTAATGGAAGAGGCAAATGTTATTAGGAAGTACGATCCTCATAGCAACACTTACAACGCCGGTTGGAGAGATA
ACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCCTCTTCGAACAATCAAGGTACAAATTTGGAAGATTTAGTTAAAGCTCTTGCTACTATT
ACTATCTCTTTTCAGAATGAAATGAAGCAACAAATGTCTCATCTAACCAATGCAATAAGCAAGCTAGAAGGTAAAGGCAAACTTCTGGCTCAGCTTGATCATGCCAACGT
AAGTGTCATCTCACTTAGAAACGGTAAGATTCTGGAAACCCTTTCAAGTAAAGAAAAGGTAACTTCTATCCCCTATCCTTCTAGAAAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGCAAGTTAGAGAGAAAACCTTAAGAGAGCTTTCCGAGCCTAACGAGGACCAAAGGCCCCTCTGCATTGTAATTCCCCCAACCACTCAACCCTTCAAACTCAAACC
TGGAGTAATCCATCTCTTACCTATATACAAGGGTAGTTCAGGAGAGGACCCCCATAAACACCTCAAAGACTTTCATATGGTTTGTGACTCAATGAGACTGCACGGTGTTT
CAAAGGAACAACTTAACTTGAGAGCCTTTCCATTTTCTTTGACTGACACAGCCAAAAGATGGCTTTACTACCTAGAGCCAGGGTCCATCACCACTTGGGGAAGCCTTAAA
AAGAAATTCCTAGAAAAATTCTTTCCTACTTCTAGAGCCAATAATATTAGGAAAGAAATCTATGGAATAAGGCAAGCTTTTGGGGAGTCCTTGTCTGAATACTGGGAAAG
GTTTAAGGAGCTCTGCGCTAGTTTCCCCCATCACCATATTTCTGATCCATCACTAATACAATATTTCTATTCTGGACTACTAACTATGGATAGAAATACAGTAGACGCTG
CAGCAGGTGGTGCATTGGCTGACAAAACCCCTACTGAGGCTAGAGAGCTCATTTCGAGGATGGCTGGAAATTCATTGAACTTTGGGAACAGAGCATCCGAGCTCGACAAT
TCATTGACTAAGGAGGTAAGTGAACTCAAATCACAAATGGTTAATATGACTACTTTACTAACTTCCTTTGTTCAAGGTGGATCCGTTAAAGTTGCAAAGTGTGGGGTGTG
CGGTCTAGTCGGACATCCTAATGACAAGTACCCTGACTTAATGGAAGAGGCAAATGTTATTAGGAAGTACGATCCTCATAGCAACACTTACAACGCCGGTTGGAGAGATA
ACCCTAATCTAAGATGGGGAAACGACAACCAAAGACCCTCGCAAGCAACCTCCTCTTCGAACAATCAAGGTACAAATTTGGAAGATTTAGTTAAAGCTCTTGCTACTATT
ACTATCTCTTTTCAGAATGAAATGAAGCAACAAATGTCTCATCTAACCAATGCAATAAGCAAGCTAGAAGGTAAAGGCAAACTTCTGGCTCAGCTTGATCATGCCAACGT
AAGTGTCATCTCACTTAGAAACGGTAAGATTCTGGAAACCCTTTCAAGTAAAGAAAAGGTAACTTCTATCCCCTATCCTTCTAGAAAATAA
Protein sequenceShow/hide protein sequence
MGQVREKTLRELSEPNEDQRPLCIVIPPTTQPFKLKPGVIHLLPIYKGSSGEDPHKHLKDFHMVCDSMRLHGVSKEQLNLRAFPFSLTDTAKRWLYYLEPGSITTWGSLK
KKFLEKFFPTSRANNIRKEIYGIRQAFGESLSEYWERFKELCASFPHHHISDPSLIQYFYSGLLTMDRNTVDAAAGGALADKTPTEARELISRMAGNSLNFGNRASELDN
SLTKEVSELKSQMVNMTTLLTSFVQGGSVKVAKCGVCGLVGHPNDKYPDLMEEANVIRKYDPHSNTYNAGWRDNPNLRWGNDNQRPSQATSSSNNQGTNLEDLVKALATI
TISFQNEMKQQMSHLTNAISKLEGKGKLLAQLDHANVSVISLRNGKILETLSSKEKVTSIPYPSRK