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PI0001930 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001930
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrovirus-related Pol polyprotein from transposon TNT 1-94
Genome locationchr03:24755201..24755894
RNA-Seq ExpressionPI0001930
SyntenyPI0001930
Gene Ontology termsGO:0044237 - cellular metabolic process (biological process)
GO:0005488 - binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GAU28864.1 hypothetical protein TSUD_293160 [Trifolium subterraneum]3.7e-1249.44Show/hide
Query:  MDKATQDQGMINQTLNQSEWSKDKTWYLDTGANN----------QLDELVSDNVAFDDESKVEVKCRGNILIRLKNGEHQLISNVNYVP
        +++ +Q+ G +      +E   D  WYLD+GA+N          +LDE V+ NVAF DESKV VK +GN+LIRLKNG+HQ ISNV YVP
Subjt:  MDKATQDQGMINQTLNQSEWSKDKTWYLDTGANN----------QLDELVSDNVAFDDESKVEVKCRGNILIRLKNGEHQLISNVNYVP

GAU34810.1 hypothetical protein TSUD_394360 [Trifolium subterraneum]1.7e-1249.44Show/hide
Query:  MDKATQDQGMINQTLNQSEWSKDKTWYLDTGANN----------QLDELVSDNVAFDDESKVEVKCRGNILIRLKNGEHQLISNVNYVP
        +++ +Q+ G +      +E   D  WYLD+GA+N          +LDE V++NVAF DESKV VK +GN+LIRLKNG+HQ ISNV YVP
Subjt:  MDKATQDQGMINQTLNQSEWSKDKTWYLDTGANN----------QLDELVSDNVAFDDESKVEVKCRGNILIRLKNGEHQLISNVNYVP

KAA0040440.1 lectin receptor kinase [Cucumis melo var. makuwa]3.8e-2555.94Show/hide
Query:  VEELVPIIEVNKDENAKDIENEEEDEEDVVGGPMKTTTITTKEDWKTQQEVMDKATQDQ----GMINQTLNQSEWSKDKTWYLDTGANN----------Q
        VEELVPII+ NKD N  +IE+EEED +DV+GG MKTTTIT KED +TQ++V+DKATQDQ    G +      SEW+KD TWYLDTGANN          +
Subjt:  VEELVPIIEVNKDENAKDIENEEEDEEDVVGGPMKTTTITTKEDWKTQQEVMDKATQDQ----GMINQTLNQSEWSKDKTWYLDTGANN----------Q

Query:  LDELVSDNVAFDDESKVEVKCRG---NILIRLKNGEHQLISNV
        LDE +S NVAF DESKVEVK R       ++LKN +    +NV
Subjt:  LDELVSDNVAFDDESKVEVKCRG---NILIRLKNGEHQLISNV

KAA0047179.1 Retrovirus-related Pol polyprotein from transposon TNT 1-94 [Cucumis melo var. makuwa]3.7e-1242.98Show/hide
Query:  INCSSYELILLVEELVPIIEVNKDENAKDIENEEEDE-EDVVGGPMKTTTITTKEDWKT------QQEVMDKATQDQGM----------------INQTL
        INCSSYELILLV++L+PIIEVNK EN  DI++EEED  +D++GG MKT TI TK   K       Q++   +A +++ +                +    
Subjt:  INCSSYELILLVEELVPIIEVNKDENAKDIENEEEDE-EDVVGGPMKTTTITTKEDWKT------QQEVMDKATQDQGM----------------INQTL

Query:  NQSEWSKDKTWYLDTGANNQL
        + S+WSKDKTWY + G +N +
Subjt:  NQSEWSKDKTWYLDTGANNQL

PNX83844.1 receptor-like protein kinase, partial [Trifolium pratense]4.3e-1348.48Show/hide
Query:  DWKTQQEV---MDKATQDQGMINQTLNQSEWSKDKTWYLDTGANN----------QLDELVSDNVAFDDESKVEVKCRGNILIRLKNGEHQLISNVNYV
        DW ++Q      D++  +   ++ T + +E   D  WYLD+GA+N          +LDELV+ NVAF DESKV VKC+GN+LIRLKNG+HQ ISNV YV
Subjt:  DWKTQQEV---MDKATQDQGMINQTLNQSEWSKDKTWYLDTGANN----------QLDELVSDNVAFDDESKVEVKCRGNILIRLKNGEHQLISNVNYV

TrEMBL top hitse value%identityAlignment
A0A2K3LZ87 Receptor-like protein kinase (Fragment)2.1e-1348.48Show/hide
Query:  DWKTQQEV---MDKATQDQGMINQTLNQSEWSKDKTWYLDTGANN----------QLDELVSDNVAFDDESKVEVKCRGNILIRLKNGEHQLISNVNYV
        DW ++Q      D++  +   ++ T + +E   D  WYLD+GA+N          +LDELV+ NVAF DESKV VKC+GN+LIRLKNG+HQ ISNV YV
Subjt:  DWKTQQEV---MDKATQDQGMINQTLNQSEWSKDKTWYLDTGANN----------QLDELVSDNVAFDDESKVEVKCRGNILIRLKNGEHQLISNVNYV

A0A2Z6M8Q0 Uncharacterized protein1.8e-1249.44Show/hide
Query:  MDKATQDQGMINQTLNQSEWSKDKTWYLDTGANN----------QLDELVSDNVAFDDESKVEVKCRGNILIRLKNGEHQLISNVNYVP
        +++ +Q+ G +      +E   D  WYLD+GA+N          +LDE V+ NVAF DESKV VK +GN+LIRLKNG+HQ ISNV YVP
Subjt:  MDKATQDQGMINQTLNQSEWSKDKTWYLDTGANN----------QLDELVSDNVAFDDESKVEVKCRGNILIRLKNGEHQLISNVNYVP

A0A2Z6NEL1 Integrase catalytic domain-containing protein8.0e-1349.44Show/hide
Query:  MDKATQDQGMINQTLNQSEWSKDKTWYLDTGANN----------QLDELVSDNVAFDDESKVEVKCRGNILIRLKNGEHQLISNVNYVP
        +++ +Q+ G +      +E   D  WYLD+GA+N          +LDE V++NVAF DESKV VK +GN+LIRLKNG+HQ ISNV YVP
Subjt:  MDKATQDQGMINQTLNQSEWSKDKTWYLDTGANN----------QLDELVSDNVAFDDESKVEVKCRGNILIRLKNGEHQLISNVNYVP

A0A5A7U120 Retrovirus-related Pol polyprotein from transposon TNT 1-941.8e-1242.98Show/hide
Query:  INCSSYELILLVEELVPIIEVNKDENAKDIENEEEDE-EDVVGGPMKTTTITTKEDWKT------QQEVMDKATQDQGM----------------INQTL
        INCSSYELILLV++L+PIIEVNK EN  DI++EEED  +D++GG MKT TI TK   K       Q++   +A +++ +                +    
Subjt:  INCSSYELILLVEELVPIIEVNKDENAKDIENEEEDE-EDVVGGPMKTTTITTKEDWKT------QQEVMDKATQDQGM----------------INQTL

Query:  NQSEWSKDKTWYLDTGANNQL
        + S+WSKDKTWY + G +N +
Subjt:  NQSEWSKDKTWYLDTGANNQL

A0A5D3DZJ9 Lectin receptor kinase1.8e-2555.94Show/hide
Query:  VEELVPIIEVNKDENAKDIENEEEDEEDVVGGPMKTTTITTKEDWKTQQEVMDKATQDQ----GMINQTLNQSEWSKDKTWYLDTGANN----------Q
        VEELVPII+ NKD N  +IE+EEED +DV+GG MKTTTIT KED +TQ++V+DKATQDQ    G +      SEW+KD TWYLDTGANN          +
Subjt:  VEELVPIIEVNKDENAKDIENEEEDEEDVVGGPMKTTTITTKEDWKTQQEVMDKATQDQ----GMINQTLNQSEWSKDKTWYLDTGANN----------Q

Query:  LDELVSDNVAFDDESKVEVKCRG---NILIRLKNGEHQLISNV
        LDE +S NVAF DESKVEVK R       ++LKN +    +NV
Subjt:  LDELVSDNVAFDDESKVEVKCRG---NILIRLKNGEHQLISNV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAAAAGAAAAAGAAGGAAGGAATCGAGGATCAATTGCTCAAGTTACGAGTTGATTCTACTAGTGGAGGAATTAGTCCCAATAATAGAAGTGAACAAGGACGAGAA
TGCGAAAGACATCGAGAACGAGGAAGAGGATGAGGAAGACGTAGTTGGAGGCCCAATGAAGACAACAACAATAACTACCAAAGAGGATTGGAAAACTCAACAAGAGGTCA
TGGACAAGGCAACTCAAGATCAAGGTATGATAAATCAAACATTAAATCAAAGTGAATGGAGCAAAGATAAAACATGGTACCTGGACACTGGGGCAAACAATCAGCTTGAT
GAATTGGTGAGTGACAATGTAGCATTTGACGATGAATCCAAGGTAGAGGTAAAATGTAGAGGTAACATTCTCATTCGATTAAAGAATGGTGAGCACCAACTTATTTCAAA
TGTCAATTATGTGCCAAAATGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAAAAGAAAAAGAAGGAAGGAATCGAGGATCAATTGCTCAAGTTACGAGTTGATTCTACTAGTGGAGGAATTAGTCCCAATAATAGAAGTGAACAAGGACGAGAA
TGCGAAAGACATCGAGAACGAGGAAGAGGATGAGGAAGACGTAGTTGGAGGCCCAATGAAGACAACAACAATAACTACCAAAGAGGATTGGAAAACTCAACAAGAGGTCA
TGGACAAGGCAACTCAAGATCAAGGTATGATAAATCAAACATTAAATCAAAGTGAATGGAGCAAAGATAAAACATGGTACCTGGACACTGGGGCAAACAATCAGCTTGAT
GAATTGGTGAGTGACAATGTAGCATTTGACGATGAATCCAAGGTAGAGGTAAAATGTAGAGGTAACATTCTCATTCGATTAAAGAATGGTGAGCACCAACTTATTTCAAA
TGTCAATTATGTGCCAAAATGA
Protein sequenceShow/hide protein sequence
MKKRKRRKESRINCSSYELILLVEELVPIIEVNKDENAKDIENEEEDEEDVVGGPMKTTTITTKEDWKTQQEVMDKATQDQGMINQTLNQSEWSKDKTWYLDTGANNQLD
ELVSDNVAFDDESKVEVKCRGNILIRLKNGEHQLISNVNYVPK