; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0001936 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001936
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPolynucleotidyl transferase ribonuclease H-like superfamily protein
Genome locationchr07:21769048..21772214
RNA-Seq ExpressionPI0001936
SyntenyPI0001936
Gene Ontology termsGO:0000467 - exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (biological process)
GO:0000175 - 3'-5'-exoribonuclease activity (molecular function)
GO:0003676 - nucleic acid binding (molecular function)
GO:0016740 - transferase activity (molecular function)
InterPro domainsIPR012337 - Ribonuclease H-like superfamily
IPR013520 - Exonuclease, RNase T/DNA polymerase III
IPR036397 - Ribonuclease H superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004146041.1 uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucumis sativus]1.7e-18496.32Show/hide
Query:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRE
        MFLRASLLK SSFYSIPC HPLLP SLSSSICSSPRTPFSIRCHSA P+SHEPSSSA SEFPDVADNRWRPTCLYFTHG+CTMMDDPLHIKKFNHDISRE
Subjt:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRE

Query:  LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQ
        LQVDVARSNHMRTQD DYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILY+DVIQQFEDWLVQ
Subjt:  LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQ

Query:  HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD
        HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQC+VSKMKLPDYFMEWINIKDVYLNFY KKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD
Subjt:  HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD

Query:  GAHLQITARRNPKSPQHVKFLFENRI
        GAHLQ+TARRNPKSPQHVKFLFENRI
Subjt:  GAHLQITARRNPKSPQHVKFLFENRI

XP_008463707.1 PREDICTED: uncharacterized exonuclease domain-containing protein At3g15140 isoform X1 [Cucumis melo]4.5e-18597.24Show/hide
Query:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRE
        MFLRASLLKLSSFYSIPC HPLLP SLSSSICSSPRTPFSIRCHSALPISHEPSSSAPS+FPDVADNRWRPTCLYFTHG+CTMMDDPLHIKKFNHDISRE
Subjt:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRE

Query:  LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQ
        LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILY DVIQQFEDWLVQ
Subjt:  LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQ

Query:  HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD
        HQLWRKE GGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEM LVGSHHLGIDDTKNIVRVLQRMVGD
Subjt:  HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD

Query:  GAHLQITARRNPKSPQHVKFLFENRI
        GAHLQITARRNPKSPQ VKFLFENRI
Subjt:  GAHLQITARRNPKSPQHVKFLFENRI

XP_022935722.1 uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita moschata]6.6e-16887.73Show/hide
Query:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRE
        MF+RA LLK+SSFYSIPC H L+P  LSS+ICSSPRTP SIRCHS+LP +H+PSSSAPSE  DV  NRWRP CLY+T  KCTMMDDPLHIKKFNHDISRE
Subjt:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRE

Query:  LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQ
        LQVDVA S HMRTQD+++FLVLDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILY+DVIQQFEDWLV+
Subjt:  LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQ

Query:  HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD
        HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQC+VS MKLPDYFMEWINIKDVYLNFY KKATGM TMMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV D
Subjt:  HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD

Query:  GAHLQITARRNPKSPQHVKFLFENRI
        GAHLQITARRNP SPQHVKF FENRI
Subjt:  GAHLQITARRNPKSPQHVKFLFENRI

XP_022976542.1 uncharacterized exonuclease domain-containing protein At3g15140 [Cucurbita maxima]1.1e-16787.42Show/hide
Query:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRE
        MF+RA LLK+SSFYSIPC H L+P SLSS+ICSSPRTP +IRCHS+LP +HEPSSSAPSE  DV  NRWRP CLY+T  KCTMMDDPLHIKKFNHDISRE
Subjt:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRE

Query:  LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQ
        LQVDVA S HMRTQD+++FLVLDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILY+DVIQQFEDWLV+
Subjt:  LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQ

Query:  HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD
        HQ+WRK+LGGVLDRAAFVTCGNWDIKTQVPHQC+VS MKLPDYFMEWINIKDVYLNFY KKATGMA MMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV D
Subjt:  HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD

Query:  GAHLQITARRNPKSPQHVKFLFENRI
        GAHLQITARRNP SPQHVKF FENRI
Subjt:  GAHLQITARRNPKSPQHVKFLFENRI

XP_038896828.1 uncharacterized exonuclease domain-containing protein At3g15140 [Benincasa hispida]1.9e-17592.33Show/hide
Query:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRE
        MFLRA LLKLS  YSIPC H L+P SLSSSICSS RTPF +RCHSALPISHEPSSS PSEFPDVADNRWRPTCLYFT GKCTMMDDPLHIKKFNHDIS E
Subjt:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRE

Query:  LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQ
        LQVDVARSNHMR QDVD+FLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAIL++DVIQ+FEDWLVQ
Subjt:  LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQ

Query:  HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD
        HQLWRKELGGVLDRAAFVTCGNWDIKTQ PHQC+VSKMKLPDYFMEWINIKDVYLNFY KKATGMATMMRQLE+PLVGSHHLGIDDTKNIVRV+QRMV D
Subjt:  HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD

Query:  GAHLQITARRNPKSPQHVKFLFENRI
        GAHLQ TARRNPKSPQHVKFLFENRI
Subjt:  GAHLQITARRNPKSPQHVKFLFENRI

TrEMBL top hitse value%identityAlignment
A0A0A0L4N2 Exonuclease domain-containing protein8.3e-18596.32Show/hide
Query:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRE
        MFLRASLLK SSFYSIPC HPLLP SLSSSICSSPRTPFSIRCHSA P+SHEPSSSA SEFPDVADNRWRPTCLYFTHG+CTMMDDPLHIKKFNHDISRE
Subjt:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRE

Query:  LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQ
        LQVDVARSNHMRTQD DYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILY+DVIQQFEDWLVQ
Subjt:  LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQ

Query:  HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD
        HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQC+VSKMKLPDYFMEWINIKDVYLNFY KKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD
Subjt:  HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD

Query:  GAHLQITARRNPKSPQHVKFLFENRI
        GAHLQ+TARRNPKSPQHVKFLFENRI
Subjt:  GAHLQITARRNPKSPQHVKFLFENRI

A0A1S3CJV9 uncharacterized exonuclease domain-containing protein At3g15140 isoform X12.2e-18597.24Show/hide
Query:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRE
        MFLRASLLKLSSFYSIPC HPLLP SLSSSICSSPRTPFSIRCHSALPISHEPSSSAPS+FPDVADNRWRPTCLYFTHG+CTMMDDPLHIKKFNHDISRE
Subjt:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRE

Query:  LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQ
        LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILY DVIQQFEDWLVQ
Subjt:  LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQ

Query:  HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD
        HQLWRKE GGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEM LVGSHHLGIDDTKNIVRVLQRMVGD
Subjt:  HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD

Query:  GAHLQITARRNPKSPQHVKFLFENRI
        GAHLQITARRNPKSPQ VKFLFENRI
Subjt:  GAHLQITARRNPKSPQHVKFLFENRI

A0A6J1CCI3 uncharacterized exonuclease domain-containing protein At3g151403.0e-15883.28Show/hide
Query:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSA-PSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISR
        MFLRA LLK+SSFYSIPC +PL+P SL SS+ SS RTPF IRCH++LP +HEPSSSA P   P+ ADNRWRP CLY+T GKCTMMDDPLH+KKFNHDISR
Subjt:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSA-PSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISR

Query:  ELQVDVARSNHMRT--QDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDW
         LQV+ ARSNH RT  QD+D+FLVLDLEGKVEIIEFPVILV+AKT+GVTGFFHRFVRPS MSE+RINEYIEGKYGKFGVDRVWHDTAI Y++VIQQFEDW
Subjt:  ELQVDVARSNHMRT--QDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDW

Query:  LVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRM
        LV+HQLW+KELGG LDRAAFVTCGNWDIKTQVPHQC+VS ++LP+YFMEWINIKDVYLNFY KKATGM TMMRQLE+PL+GSHHLGIDDTKNIVRVLQRM
Subjt:  LVQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRM

Query:  VGDGAHLQITARRNPKSPQHVKFLFENRI
        V DGA LQITARRNP SPQHVKFLFENRI
Subjt:  VGDGAHLQITARRNPKSPQHVKFLFENRI

A0A6J1F6E0 uncharacterized exonuclease domain-containing protein At3g151403.2e-16887.73Show/hide
Query:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRE
        MF+RA LLK+SSFYSIPC H L+P  LSS+ICSSPRTP SIRCHS+LP +H+PSSSAPSE  DV  NRWRP CLY+T  KCTMMDDPLHIKKFNHDISRE
Subjt:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRE

Query:  LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQ
        LQVDVA S HMRTQD+++FLVLDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILY+DVIQQFEDWLV+
Subjt:  LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQ

Query:  HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD
        HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQC+VS MKLPDYFMEWINIKDVYLNFY KKATGM TMMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV D
Subjt:  HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD

Query:  GAHLQITARRNPKSPQHVKFLFENRI
        GAHLQITARRNP SPQHVKF FENRI
Subjt:  GAHLQITARRNPKSPQHVKFLFENRI

A0A6J1IG11 uncharacterized exonuclease domain-containing protein At3g151405.4e-16887.42Show/hide
Query:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRE
        MF+RA LLK+SSFYSIPC H L+P SLSS+ICSSPRTP +IRCHS+LP +HEPSSSAPSE  DV  NRWRP CLY+T  KCTMMDDPLHIKKFNHDISRE
Subjt:  MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRE

Query:  LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQ
        LQVDVA S HMRTQD+++FLVLDLEGKVEIIEFPVILVNAKT+ VTGFFHRFVRPSRMSE+RINEYIEGKYGKFGVDRVWHDTAILY+DVIQQFEDWLV+
Subjt:  LQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQ

Query:  HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD
        HQ+WRK+LGGVLDRAAFVTCGNWDIKTQVPHQC+VS MKLPDYFMEWINIKDVYLNFY KKATGMA MMRQLE+PLVGSHHLGIDDTKNIVRVLQRMV D
Subjt:  HQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGD

Query:  GAHLQITARRNPKSPQHVKFLFENRI
        GAHLQITARRNP SPQHVKF FENRI
Subjt:  GAHLQITARRNPKSPQHVKFLFENRI

SwissProt top hitse value%identityAlignment
Q5FVR4 3'-5' exoribonuclease 12.7e-2330.73Show/hide
Query:  DYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQHQLWRK
        DY  ++D E             EIIEFPV+L+N  ++ +   F ++VRP   S+  ++E+     G  G+ +   D A  +  V+++  +W+   +L   
Subjt:  DYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQHQLWRK

Query:  ELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFY--GKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAHL
           G   +   +T G+WD+   +  QC +S++K P +  +WINI+  Y NFY   +  T +  M+ +L M   G  H G+DD+KNI R+  RM+ DG  L
Subjt:  ELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFY--GKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAHL

Query:  QITAR
        +I  +
Subjt:  QITAR

Q7TMF2 3'-5' exoribonuclease 16.0e-2330.73Show/hide
Query:  DYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQHQLWRK
        DY  ++D E             EIIEFPV+L+N  T+ +   F ++VRP      +++E+     G  G+ +   D A  +  V+++  +W+   +L   
Subjt:  DYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQHQLWRK

Query:  ELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFY--GKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAHL
           G   +   +T G+WD+   +  QC +S++K P +  +WINI+  Y NFY   +  T +  M+ +L M   G  H G+DD+KNI R+  RM+ DG  L
Subjt:  ELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFY--GKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAHL

Query:  QITAR
        +I  +
Subjt:  QITAR

Q8C460 ERI1 exoribonuclease 33.0e-2229.81Show/hide
Query:  QDVDYFLVLDLEGKV--------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQHQLWR
        Q   YFLVLD E           EIIEFP++ +N +TM +   FH +V+P  +   ++  +        G+ +   D     + V+++ ++W+ +     
Subjt:  QDVDYFLVLDLEGKV--------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQHQLWR

Query:  KELGGVLD---RAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYG-KKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG
            G+LD   ++ FVTCG+WD+K  +P QC+   + + DYF +WIN+K  Y    G     G+  M + L +  +G  H GIDD KNI  +++ +   G
Subjt:  KELGGVLD---RAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYG-KKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDG

Query:  AHLQITAR
           + T++
Subjt:  AHLQITAR

Q8IV48 3'-5' exoribonuclease 11.3e-2230.24Show/hide
Query:  DYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQHQLWRK
        DY  ++D E             EIIEFPV+L+N  T+ +   F ++VRP      +++++        G+ +   D A  +  V+++  DW+   +L   
Subjt:  DYFLVLDLEGKV----------EIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQHQLWRK

Query:  ELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFY--GKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAHL
           G   + + +T G+WD+   +  QC +S++K P +  +WINI+  Y NFY   +  T +  M+ +L M   G  H G+DD+KNI R+  RM+ DG  L
Subjt:  ELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFY--GKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAHL

Query:  QITAR
        +I  +
Subjt:  QITAR

Q8W566 Uncharacterized exonuclease domain-containing protein At3g151402.4e-10455.79Show/hide
Query:  RASLLKLSSFYSIPCRHP--LLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFP--DVADN-RWRPTCLYFTHGKCTMMDDPLHIKKFNHDIS
        R SL ++S F      +P  L        +C+S  +       S    S   SSS+PS F   + ++N RWRP CLY+THGKCT MDDP H++ FNHD S
Subjt:  RASLLKLSSFYSIPCRHP--LLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFP--DVADN-RWRPTCLYFTHGKCTMMDDPLHIKKFNHDIS

Query:  RELQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWL
        +EL+V  A     ++Q+ ++FLV+DLEGKVEI+EFP+++V+AKTM V   FHRFVRP++MSEQ IN+YIEGKYG+ GVDRVWHDTAI ++ V+++FE WL
Subjt:  RELQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWL

Query:  VQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMV
         +H LW K+    L+ AAFVTCGNWDIKT++P QC VS + LP YFMEWIN+KDVYLNFYG++A GM +MMRQ  + L+GSHHLGIDDTKNI RV+QRM+
Subjt:  VQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMV

Query:  GDGAHLQITARRNPKSPQHVKFLFENRI
         +GA L++TARR+  + ++V+FLF+NRI
Subjt:  GDGAHLQITARRNPKSPQHVKFLFENRI

Arabidopsis top hitse value%identityAlignment
AT3G15140.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.7e-10555.79Show/hide
Query:  RASLLKLSSFYSIPCRHP--LLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFP--DVADN-RWRPTCLYFTHGKCTMMDDPLHIKKFNHDIS
        R SL ++S F      +P  L        +C+S  +       S    S   SSS+PS F   + ++N RWRP CLY+THGKCT MDDP H++ FNHD S
Subjt:  RASLLKLSSFYSIPCRHP--LLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFP--DVADN-RWRPTCLYFTHGKCTMMDDPLHIKKFNHDIS

Query:  RELQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWL
        +EL+V  A     ++Q+ ++FLV+DLEGKVEI+EFP+++V+AKTM V   FHRFVRP++MSEQ IN+YIEGKYG+ GVDRVWHDTAI ++ V+++FE WL
Subjt:  RELQVDVARSNHMRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWL

Query:  VQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMV
         +H LW K+    L+ AAFVTCGNWDIKT++P QC VS + LP YFMEWIN+KDVYLNFYG++A GM +MMRQ  + L+GSHHLGIDDTKNI RV+QRM+
Subjt:  VQHQLWRKELGGVLDRAAFVTCGNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMV

Query:  GDGAHLQITARRNPKSPQHVKFLFENRI
         +GA L++TARR+  + ++V+FLF+NRI
Subjt:  GDGAHLQITARRNPKSPQHVKFLFENRI


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTCTGAGAGCTTCGCTGCTTAAGCTTTCATCATTCTACTCAATCCCATGTCGTCATCCTCTGCTTCCCTTCTCTCTCTCTTCCTCAATTTGTTCTTCTCCTCGCAC
ACCTTTCTCTATCCGATGCCATTCAGCTCTCCCCATATCCCACGAACCATCTTCTTCAGCTCCCTCTGAATTCCCCGATGTGGCGGATAATCGTTGGAGGCCCACGTGTT
TGTATTTCACACATGGCAAGTGCACAATGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGGTCAAATCAT
ATGCGAACTCAGGACGTTGATTATTTTCTGGTGCTTGATTTGGAGGGTAAAGTTGAAATTATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACAATGGGTGTGACAGG
TTTTTTCCACAGGTTTGTTAGGCCATCAAGAATGAGTGAACAAAGAATAAATGAATACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAG
CCATACTGTATGAGGATGTTATTCAACAGTTCGAAGATTGGCTGGTTCAGCATCAGCTATGGAGGAAGGAACTGGGCGGTGTTCTTGATCGAGCAGCATTTGTGACATGT
GGCAACTGGGATATAAAAACTCAGGTCCCACATCAATGTAACGTGTCGAAGATGAAACTTCCTGACTATTTTATGGAGTGGATCAACATTAAAGATGTCTATCTTAACTT
TTACGGAAAAAAGGCAACGGGAATGGCGACGATGATGAGACAACTCGAAATGCCCTTGGTGGGAAGCCATCATCTTGGAATAGATGATACAAAGAACATCGTGAGAGTGT
TGCAAAGAATGGTTGGTGATGGAGCACATTTGCAAATCACTGCTCGAAGGAATCCTAAATCTCCTCAACATGTTAAGTTTCTTTTTGAGAACCGTATTTAG
mRNA sequenceShow/hide mRNA sequence
AAAGTTCAAATTTAAGCCGTTGATAAATAAAAATGAAATAATTTTGGGTAATAGCCCTTCGATTTTTCAATGATTATTAGTATATCGTTGCTGCTGCAGAATTCGACCAC
TCCAACGTCCGTCGTCTTCCCCTGCTCCAGTCGACCGTCGGAGTGTACACTGTACGTCATCCACTATCTTCCGTTCATTTCAATTCGATGTTTCTGAGAGCTTCGCTGCT
TAAGCTTTCATCATTCTACTCAATCCCATGTCGTCATCCTCTGCTTCCCTTCTCTCTCTCTTCCTCAATTTGTTCTTCTCCTCGCACACCTTTCTCTATCCGATGCCATT
CAGCTCTCCCCATATCCCACGAACCATCTTCTTCAGCTCCCTCTGAATTCCCCGATGTGGCGGATAATCGTTGGAGGCCCACGTGTTTGTATTTCACACATGGCAAGTGC
ACAATGATGGATGATCCACTCCACATAAAGAAGTTCAATCATGATATCTCCAGGGAGCTTCAGGTAGATGTTGCTAGGTCAAATCATATGCGAACTCAGGACGTTGATTA
TTTTCTGGTGCTTGATTTGGAGGGTAAAGTTGAAATTATTGAGTTTCCAGTCATATTAGTCAATGCCAAGACAATGGGTGTGACAGGTTTTTTCCACAGGTTTGTTAGGC
CATCAAGAATGAGTGAACAAAGAATAAATGAATACATTGAAGGAAAATATGGCAAGTTTGGAGTTGACCGTGTCTGGCATGACACAGCCATACTGTATGAGGATGTTATT
CAACAGTTCGAAGATTGGCTGGTTCAGCATCAGCTATGGAGGAAGGAACTGGGCGGTGTTCTTGATCGAGCAGCATTTGTGACATGTGGCAACTGGGATATAAAAACTCA
GGTCCCACATCAATGTAACGTGTCGAAGATGAAACTTCCTGACTATTTTATGGAGTGGATCAACATTAAAGATGTCTATCTTAACTTTTACGGAAAAAAGGCAACGGGAA
TGGCGACGATGATGAGACAACTCGAAATGCCCTTGGTGGGAAGCCATCATCTTGGAATAGATGATACAAAGAACATCGTGAGAGTGTTGCAAAGAATGGTTGGTGATGGA
GCACATTTGCAAATCACTGCTCGAAGGAATCCTAAATCTCCTCAACATGTTAAGTTTCTTTTTGAGAACCGTATTTAGTGGTGGCTATCTTCAGCAAGTTATCTTCCATA
TTTGTCTGGATGATCTATGGAATGGATAAATCTTAAAATAGATACTTCGGTCTCATGAATTGTAGATGTATCTGTCAATCAGTTCTGATGTGTTTCAAGTGTTGAAATTT
GACCAAATGAAATATGTTACAATTCTAAATTTAAATTTTAGAAAATGTTGCAAATTTAAACCTTTGATAAGGTTTCGTTTGAAATATCATTAAAA
Protein sequenceShow/hide protein sequence
MFLRASLLKLSSFYSIPCRHPLLPFSLSSSICSSPRTPFSIRCHSALPISHEPSSSAPSEFPDVADNRWRPTCLYFTHGKCTMMDDPLHIKKFNHDISRELQVDVARSNH
MRTQDVDYFLVLDLEGKVEIIEFPVILVNAKTMGVTGFFHRFVRPSRMSEQRINEYIEGKYGKFGVDRVWHDTAILYEDVIQQFEDWLVQHQLWRKELGGVLDRAAFVTC
GNWDIKTQVPHQCNVSKMKLPDYFMEWINIKDVYLNFYGKKATGMATMMRQLEMPLVGSHHLGIDDTKNIVRVLQRMVGDGAHLQITARRNPKSPQHVKFLFENRI