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PI0001947 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001947
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCalcium-binding EF-hand family protein, putative
Genome locationchr03:1388474..1389198
RNA-Seq ExpressionPI0001947
SyntenyPI0001947
Gene Ontology termsGO:0005509 - calcium ion binding (molecular function)
InterPro domainsIPR002048 - EF-hand domain
IPR011992 - EF-hand domain pair
IPR018247 - EF-Hand 1, calcium-binding site


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060897.1 putative calcium-binding protein CML10 [Cucumis melo var. makuwa]2.0e-5090.43Show/hide
Query:  MHTFTQYINLHFKEQILTTTGPNKISSFFLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISL
        MHTFTQYINLHF+EQ +TTT PNKISS FLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWT  RVKGALRAVDAN DGVIS+
Subjt:  MHTFTQYINLHFKEQILTTTGPNKISSFFLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISL

Query:  DEMSKLIVYVKGRHT
        DEMSKLIVYVKG  T
Subjt:  DEMSKLIVYVKGRHT

KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]3.2e-1667.61Show/hide
Query:  SEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKGR
        SEEQLA +FK HD D D  LTKEEL +AF+YLGSR++N RV+ ALRA D N DGVIS+DEM KLI Y K R
Subjt:  SEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKGR

KAE8652092.1 hypothetical protein Csa_021918 [Cucumis sativus]3.3e-5090.52Show/hide
Query:  MHTFTQYINLHFKEQILTTTGPNKISS-FFLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVIS
        MHTFTQYINLHFKEQ LTT  PNKISS FFLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEEL RAF+YLGSRWT LRVK A+RAVDANHDGVIS
Subjt:  MHTFTQYINLHFKEQILTTTGPNKISS-FFLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVIS

Query:  LDEMSKLIVYVKGRHT
        LDEMSKLIVYVKG  T
Subjt:  LDEMSKLIVYVKGRHT

KAG7020566.1 hypothetical protein SDJN02_17252, partial [Cucurbita argyrosperma subsp. argyrosperma]3.2e-1653.06Show/hide
Query:  LFFVCMGNKYSSL---------------SEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKG
        L F+C+ +  SS+               +EEQLA IFK HD D D KL+KEEL +AF+YLGSR+++ RVK ALRA D N DG IS+DEM+KLI Y KG
Subjt:  LFFVCMGNKYSSL---------------SEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKG

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]1.9e-1667.61Show/hide
Query:  SEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKGR
        +EEQLA IFK HD D D KL+KEEL +AF+YLGSR+++ RVK ALRA D N DG IS+DEM+KLI Y KGR
Subjt:  SEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKGR

TrEMBL top hitse value%identityAlignment
A0A0A0LL93 Uncharacterized protein3.1e-3391.36Show/hide
Query:  MGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKGRHT
        MGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEEL RAF+YLGSRWT LRVK A+RAVDANHDGVISLDEMSKLIVYVKG  T
Subjt:  MGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKGRHT

A0A0A0LP43 Uncharacterized protein8.7e-1253.01Show/hide
Query:  LFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKG
        L F C     +SL+E ++A +FK HD D D +LTKEEL  AF YLG ++T  RV  AL A D N D VIS +EMSKLI+Y  G
Subjt:  LFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKG

A0A0A0LRB6 Uncharacterized protein3.4e-1667.61Show/hide
Query:  SEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKGR
        SEEQLA +FK HD D D  LTKEEL +AF+YLGSR+ N RV+ ALRA D N DGVIS+DEM KLI Y K R
Subjt:  SEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKGR

A0A5A7V219 Putative calcium-binding protein CML109.5e-5190.43Show/hide
Query:  MHTFTQYINLHFKEQILTTTGPNKISSFFLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISL
        MHTFTQYINLHF+EQ +TTT PNKISS FLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWT  RVKGALRAVDAN DGVIS+
Subjt:  MHTFTQYINLHFKEQILTTTGPNKISSFFLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISL

Query:  DEMSKLIVYVKGRHT
        DEMSKLIVYVKG  T
Subjt:  DEMSKLIVYVKGRHT

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein1.5e-1667.61Show/hide
Query:  SEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKGR
        SEEQLA +FK HD D D  LTKEEL +AF+YLGSR++N RV+ ALRA D N DGVIS+DEM KLI Y K R
Subjt:  SEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKGR

SwissProt top hitse value%identityAlignment
O64943 Polcalcin Jun o 26.4e-0435.62Show/hide
Query:  CMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKL
        C G      S  +L  +FKK D + D K++  ELA     LGS      VK  +   DA+ DG +SL E   L
Subjt:  CMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKL

P30188 Probable calcium-binding protein CML354.9e-0432Show/hide
Query:  SLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLG-SRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKGRH
        S+  E+L  +F+  D+DR+ K++ EEL R F  +G  R T       +  VD N DG +  D+  +++V     H
Subjt:  SLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLG-SRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKGRH

Q8RZB5 Probable calcium-binding protein CML102.2e-0431.17Show/hide
Query:  GNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKG
        G   +   EE++  +F+K D + D ++++ EL   F+ LG   T+  +   +   DA+ DG ISLDE + L     G
Subjt:  GNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKG

Arabidopsis top hitse value%identityAlignment
AT1G76640.1 Calcium-binding EF-hand family protein6.6e-0427.14Show/hide
Query:  KYSSLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLI
        K+       L  +F   D +RD +++ EEL ++F  LG + ++   + A++  D + DG++ ++E + LI
Subjt:  KYSSLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLI

AT1G76650.1 calmodulin-like 383.0e-0432.26Show/hide
Query:  QLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLI
        +L  +F   D +RD +++ EEL ++F  LG + ++     A+R  D + DG++  +E S+LI
Subjt:  QLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLI

AT1G76650.3 calmodulin-like 383.0e-0432.26Show/hide
Query:  QLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLI
        +L  +F   D +RD +++ EEL ++F  LG + ++     A+R  D + DG++  +E S+LI
Subjt:  QLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLI

AT2G41410.1 Calcium-binding EF-hand family protein3.5e-0532Show/hide
Query:  SLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLG-SRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKGRH
        S+  E+L  +F+  D+DR+ K++ EEL R F  +G  R T       +  VD N DG +  D+  +++V     H
Subjt:  SLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLG-SRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYVKGRH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCACACTTTTACACAGTATATAAATCTCCATTTCAAAGAGCAAATCCTAACCACTACCGGCCCAAACAAAATCTCTTCTTTCTTCTTGTTCTTCGTGTGCATGGGAAA
CAAGTACAGTTCTTTGAGTGAAGAACAGCTCGCCTGGATTTTCAAGAAGCACGACATCGACAGAGACAGGAAGCTGACCAAAGAAGAGTTGGCACGAGCCTTCGACTATT
TGGGTTCAAGGTGGACCAACTTGAGAGTCAAGGGAGCCCTTCGCGCTGTCGATGCAAACCACGACGGCGTCATCAGTTTGGATGAGATGAGTAAGCTCATTGTGTATGTC
AAAGGTCGTCATACCTAA
mRNA sequenceShow/hide mRNA sequence
CCCATGTGAGAGTGTGAACAACAACCATGCACACTTTTACACAGTATATAAATCTCCATTTCAAAGAGCAAATCCTAACCACTACCGGCCCAAACAAAATCTCTTCTTTC
TTCTTGTTCTTCGTGTGCATGGGAAACAAGTACAGTTCTTTGAGTGAAGAACAGCTCGCCTGGATTTTCAAGAAGCACGACATCGACAGAGACAGGAAGCTGACCAAAGA
AGAGTTGGCACGAGCCTTCGACTATTTGGGTTCAAGGTGGACCAACTTGAGAGTCAAGGGAGCCCTTCGCGCTGTCGATGCAAACCACGACGGCGTCATCAGTTTGGATG
AGATGAGTAAGCTCATTGTGTATGTCAAAGGTCGTCATACCTAAACAATTAATACTTTAACTGTTAATTGAACTGCAACCATCTTTTACAACTCAACCTACATGGAACTT
ACTAGATGTCACCATATAGTTGCTCCACTCGGTTGAGTCGTAAAATATAAAATGCAGCCTAGTTAACAGTTGAAAACTCTACGTCGCATAGTTATAAATATTAACAAAAA
AAAAAAAGTCTTTTTTATTGGATAAAAATGTAAAGTGTTATATCGACTCTCTATTGTAGATTTGAAATCTACATTTGTAAGTGTGATAACGGTGTAATGTTTTAAGAAAA
AAAAAAGTTTATAATGCAACTACTTATCTGTTTTCTTTTTAATAAATTGTTAATTGTGTTGGTAA
Protein sequenceShow/hide protein sequence
MHTFTQYINLHFKEQILTTTGPNKISSFFLFFVCMGNKYSSLSEEQLAWIFKKHDIDRDRKLTKEELARAFDYLGSRWTNLRVKGALRAVDANHDGVISLDEMSKLIVYV
KGRHT