CuGenDBv2

Gene ID	PI0001968
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Calcium-binding EF-hand
Genome location	chr03:1376316..1376779
RNA-Seq Expression	PI0001968
Synteny	PI0001968
Gene Ontology terms	GO:0005509 - calcium ion binding (molecular function)
InterPro domains	IPR002048 - EF-hand domain IPR011992 - EF-hand domain pair IPR018247 - EF-Hand 1, calcium-binding site

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0060899.1 putative Calcium-binding EF-hand family protein [Cucumis melo var. makuwa]

2.4e-43

100

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Query:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS
        MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS
Subjt:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS

KAG6598376.1 hypothetical protein SDJN03_08154, partial [Cucurbita argyrosperma subsp. sororia]

1.3e-36

87.91

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Query:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI
        MGNSKSKTYKRVLVPFSEEQLA+VFKNHD DGDG LTKEELKQAF+YLGSRFS+FRVEEALRAADT+GDG ISM EMGKLI+YAK+RKYT+
Subjt:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI

KAG7020569.1 hypothetical protein SDJN02_17255, partial [Cucurbita argyrosperma subsp. argyrosperma]

1.0e-33

81.32

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Query:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI
        MGN+KS  YKRVLVPF+EEQLA +FK+HDRDGDG L+KEELKQAF YLGSRFS+FRV+EALRAADTNGDG ISMDEM KLIKY K RKYT+
Subjt:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI

KAG7029343.1 Calcium-binding protein CML37, partial [Cucurbita argyrosperma subsp. argyrosperma]

4.1e-35

85.71

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Query:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI
        MGNSKSKTYKRVLVPFSEEQLA+VFKNHD DGDG LTKEELKQAF+YLGSRFS+FRVEEALRAAD +GDG ISM EM KLI+YAK+RKYT+
Subjt:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI

KGN62765.2 hypothetical protein Csa_022396 [Cucumis sativus]

3.7e-36

97.56

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Query:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIK
        MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDG+LTKEELKQAFEYLGSRF NFRVEEALRAADTNGDGVISMDEMGKLIK
Subjt:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LP43 Uncharacterized protein

4.2e-17

57.83

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Query:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKY
        MG S    +K      +E ++A VFKNHD+DGDG LTKEELK AF+YLG +F+ FRV +AL AAD N D VIS +EM KLI Y
Subjt:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKY

A0A0A0LRB6 Uncharacterized protein

1.7e-42

97.83

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Query:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS
        MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDG+LTKEELKQAFEYLGSRF NFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS
Subjt:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS

A0A2N9FYQ0 Uncharacterized protein

3.2e-17

49.43

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Query:  KSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI
        K  ++KR  +PF+EEQL N+FK+HD DGDG L+++E+K+AF+YLGSR+  +R  +A+  AD + DG I  +E+ KL++YA    YTI
Subjt:  KSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI

A0A5A7V5B0 Putative Calcium-binding EF-hand family protein

1.2e-43

100

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Query:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS
        MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS
Subjt:  MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS

A0A7N2KRS3 Uncharacterized protein

2.6e-19

54.02

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Query:  KSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI
        K+  +KR  VPF+E+QL N+FK+HD DGDG L+++ELK AF+YLGSR+  +R ++ALR AD N DG I+ DE+ KL++YA    YT+
Subjt:  KSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTI

SwissProt top hits

e value

%identity

Alignment

P05933 Calmodulin

4.5e-08

43.08

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Query:  SEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLI
        +EE++   FK  D+DG+G +T EEL      LG R S   V + +R ADT+GDGVI+ +E  ++I
Subjt:  SEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLI

P24044 Calmodulin

1.0e-07

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Query:  SEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLI
        +EE+L   F+  DRDGDG ++ +EL+     LG + +N  V+E +R AD +GDG I+ +E  K++
Subjt:  SEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLI

P62203 Calmodulin

1.0e-07

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Query:  SEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLI
        +EE+L   F+  DRDGDG ++ +EL+     LG + +N  V+E +R AD +GDG I+ +E  K++
Subjt:  SEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLI

Q8X187 Calmodulin

5.0e-07

38.46

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Query:  SEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLI
        SEE++   FK  D+DG+G ++  EL+     LG + ++  V+E +R AD +GDG I+ DE  K++
Subjt:  SEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLI

Q9HFY6 Calmodulin

5.0e-07

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Query:  SEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLI
        SEE++   FK  D+DG+G ++  EL+     LG + S   VEE +R AD +GDG I+ +E  K++
Subjt:  SEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLI

Arabidopsis top hits

e value

%identity

Alignment

AT1G18530.1 EF hand calcium-binding protein family

3.5e-08

39.71

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Query:  VPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLI
        V  + EQL  +FK+ DRDG+G ++  EL  A   +G   +   + E ++ ADTNGDGVIS  E   ++
Subjt:  VPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLI

AT3G25600.1 Calcium-binding EF-hand family protein

6.0e-08

38.24

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Query:  VPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLI
        V  ++EQL  VF++ DRDG+G++T  EL  +   +G   +   + E +  AD+NGDGVIS +E   ++
Subjt:  VPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLI

AT4G03290.1 EF hand calcium-binding protein family

1.7e-07

36.51

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Query:  QLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIK
        +L  VF+  D+DGDG +T +EL ++F+ LG       + + ++  D NGDG + ++E G+L K
Subjt:  QLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIK

AT4G04695.1 calcium-dependent protein kinase 31

1.0e-07

39.24

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Query:  MGNSKSKTYKRVLVPFSEEQ---LANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDE
        M   K    K +    SEE+   L  +F N D D  G +T EELK     LGS  S   VE+ + AAD +G+G I +DE
Subjt:  MGNSKSKTYKRVLVPFSEEQ---LANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDE

AT4G04700.1 calcium-dependent protein kinase 27

3.5e-08

42.11

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Query:  YKRVLVPF-----SEEQ---LANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDE
        +K+V++ F     SEE+   L  +F N D D  GN+T EELK     LGS  S   VE+ + AAD +G+G I +DE
Subjt:  YKRVLVPF-----SEEQ---LANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDE

Sequences

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CDS sequence

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ATGGGGAACTCCAAAAGCAAAACTTACAAACGAGTTCTAGTTCCATTCTCAGAGGAGCAACTGGCCAACGTTTTCAAGAACCACGACCGAGACGGGGATGGGAATCTGAC
GAAGGAGGAGTTGAAGCAAGCCTTTGAATATCTCGGCTCACGCTTCAGCAACTTTCGGGTCGAAGAAGCCCTACGTGCCGCTGATACCAACGGGGATGGTGTCATCAGCA
TGGATGAGATGGGGAAGCTAATTAAGTATGCCAAAACTCGTAAATACACTATTAGTTAA

mRNA sequence

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CACTATAAAAGCCCATTAAAGCCTAGTTTCAAACCCAACAAGTTAAAAGAAATAATTCTTGTTTTAAAAAAAAAACGTCTCATTTCCTTTCTTCATCCATTGGGACTTCT
TCTTTATTTTCTTGGATGGGGAACTCCAAAAGCAAAACTTACAAACGAGTTCTAGTTCCATTCTCAGAGGAGCAACTGGCCAACGTTTTCAAGAACCACGACCGAGACGG
GGATGGGAATCTGACGAAGGAGGAGTTGAAGCAAGCCTTTGAATATCTCGGCTCACGCTTCAGCAACTTTCGGGTCGAAGAAGCCCTACGTGCCGCTGATACCAACGGGG
ATGGTGTCATCAGCATGGATGAGATGGGGAAGCTAATTAAGTATGCCAAAACTCGTAAATACACTATTAGTTAAAACGTAAATATATGTTGACTATATCAACTTTTTTTG
TTCTTGTTCACCTATATATATAAT

Protein sequence

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MGNSKSKTYKRVLVPFSEEQLANVFKNHDRDGDGNLTKEELKQAFEYLGSRFSNFRVEEALRAADTNGDGVISMDEMGKLIKYAKTRKYTIS

PI0001968 (gene) of Melon (PI 482460) v1 genome