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PI0001972 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001972
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein Ycf2-like
Genome locationchr03:23731447..23734467
RNA-Seq ExpressionPI0001972
SyntenyPI0001972
Gene Ontology termsGO:0016020 - membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0048518.1 protein Ycf2-like [Cucumis melo var. makuwa]2.4e-1148.15Show/hide
Query:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRKVDQS-HMRLLHFKRDL
        +PRIINWA D+QPKW DL++KVF+SP L++ P+LAT  E+ MP+F PF+E EK      +   RK   S H+  + F+  L
Subjt:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRKVDQS-HMRLLHFKRDL

TYK09852.1 protein Ycf2-like [Cucumis melo var. makuwa]3.2e-1155.38Show/hide
Query:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRK
        +PRIINWA D+QPKW DL++KVF+SP LE+ P+LAT +E+ MP+F PF E EK      +   RK
Subjt:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRK

TYK26024.1 protein Ycf2-like [Cucumis melo var. makuwa]3.2e-1155.38Show/hide
Query:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRK
        +PRIINWA D+QPKW DL++KVF+SP LE+ P+LAT +E+ MP+F PF E EK      +   RK
Subjt:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRK

TYK29864.1 protein Ycf2-like [Cucumis melo var. makuwa]3.2e-1155.38Show/hide
Query:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRK
        +PRIINWA D+QPKW DL++KVF+SP LE+ P+LAT +E+ MP+F PF E EK      +   RK
Subjt:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRK

TYK30414.1 protein Ycf2-like [Cucumis melo var. makuwa]6.4e-1253.62Show/hide
Query:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRKVDQS
        +PRIINWA D+QPKW DL++KVF+SP LE+ P+LAT  E+ MP+F PF+E EK      +   RK   S
Subjt:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRKVDQS

TrEMBL top hitse value%identityAlignment
A0A5A7TZZ0 Protein Ycf2-like1.2e-1148.15Show/hide
Query:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRKVDQS-HMRLLHFKRDL
        +PRIINWA D+QPKW DL++KVF+SP L++ P+LAT  E+ MP+F PF+E EK      +   RK   S H+  + F+  L
Subjt:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRKVDQS-HMRLLHFKRDL

A0A5A7U6E1 Protein Ycf2-like1.5e-1144.21Show/hide
Query:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRKVDQS-HMRLLHFKR------DLIVYKKKKM
        +PRIINWA D+QPKW DL++KVF+SP LE+ P+LAT  E+ MP+F PF+E EK      +   RK   S H+  +   R      ++ + +K KM
Subjt:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRKVDQS-HMRLLHFKR------DLIVYKKKKM

A0A5D3DHZ2 Protein Ycf2-like1.5e-1155.38Show/hide
Query:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRK
        +PRIINWA D+QPKW DL++KVF+SP LE+ P+LAT +E+ MP+F PF E EK      +   RK
Subjt:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRK

A0A5D3DR12 Protein Ycf2-like1.5e-1155.38Show/hide
Query:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRK
        +PRIINWA D+QPKW DL++KVF+SP LE+ P+LAT +E+ MP+F PF E EK      +   RK
Subjt:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRK

A0A5D3E3E8 Protein Ycf2-like3.1e-1253.62Show/hide
Query:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRKVDQS
        +PRIINWA D+QPKW DL++KVF+SP LE+ P+LAT  E+ MP+F PF+E EK      +   RK   S
Subjt:  MPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRKVDQS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGGAAGTTATGAAGAAGTGGCAGGAGGACCTAAATGTTATTGAACGACAAAAGAACAAAATTCTTGAATTGGTAGAGGACAATCATAGATTATTACAAACCATTTC
AGACATAAAAAAGGAGCTGAAAAGTGCCAGAAGTGAAAATGATCGAATGTCCAAATCTGTTTGGATGCTCAATTCAGGAACAAAAGACTTGAATCACATATTGAGTTCGG
GAAAATCCGTTTCTAACAAACAAGGTATAGGATTTGATAACAAATCCGCAGACAATTCCACTCAAACTATTTTTGTTCCTGCTCAAAACCAGGGAAATCGGATTCCACAT
AATAGTGGTTCATCATCTAAACAACCATCTACTTTACTGATGCCAAGAATAATAAATTGGGCAGTTGATAGTCAACCAAAATGGACGGATTTGCAGAAGAAAGTATTTGA
ATCACCTGAGCTTGAAATATGTCCACTTCTAGCAACAAAAGAAGAAATGGCAATGCCATGGTTTGAACCATTCTTGGAAGAAGAAAAAATTTCATCCTTGAGGTTGAAGC
AAAATTTCAGAAAAGTAGATCAAAGTCACATGCGGCTACTACATTTCAAAAGAGACTTGATAGTATACAAGAAGAAGAAGATGAGAATGAAGAAGACTCAGATGCTTGTG
GGGTGGGCAAATTTCAATCCAAAAAAAAAAAATGATGAACATGAAGGGGATGAAGGGGATGGAAATAAACAACACCAGAGAACACCTCCTAGTCTGGTCAACAAGCAAAC
AGAACAACTTAGTGAAGAAAAAGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGAGGAAGTTATGAAGAAGTGGCAGGAGGACCTAAATGTTATTGAACGACAAAAGAACAAAATTCTTGAATTGGTAGAGGACAATCATAGATTATTACAAACCATTTC
AGACATAAAAAAGGAGCTGAAAAGTGCCAGAAGTGAAAATGATCGAATGTCCAAATCTGTTTGGATGCTCAATTCAGGAACAAAAGACTTGAATCACATATTGAGTTCGG
GAAAATCCGTTTCTAACAAACAAGGTATAGGATTTGATAACAAATCCGCAGACAATTCCACTCAAACTATTTTTGTTCCTGCTCAAAACCAGGGAAATCGGATTCCACAT
AATAGTGGTTCATCATCTAAACAACCATCTACTTTACTGATGCCAAGAATAATAAATTGGGCAGTTGATAGTCAACCAAAATGGACGGATTTGCAGAAGAAAGTATTTGA
ATCACCTGAGCTTGAAATATGTCCACTTCTAGCAACAAAAGAAGAAATGGCAATGCCATGGTTTGAACCATTCTTGGAAGAAGAAAAAATTTCATCCTTGAGGTTGAAGC
AAAATTTCAGAAAAGTAGATCAAAGTCACATGCGGCTACTACATTTCAAAAGAGACTTGATAGTATACAAGAAGAAGAAGATGAGAATGAAGAAGACTCAGATGCTTGTG
GGGTGGGCAAATTTCAATCCAAAAAAAAAAAATGATGAACATGAAGGGGATGAAGGGGATGGAAATAAACAACACCAGAGAACACCTCCTAGTCTGGTCAACAAGCAAAC
AGAACAACTTAGTGAAGAAAAAGAATAA
Protein sequenceShow/hide protein sequence
MEEVMKKWQEDLNVIERQKNKILELVEDNHRLLQTISDIKKELKSARSENDRMSKSVWMLNSGTKDLNHILSSGKSVSNKQGIGFDNKSADNSTQTIFVPAQNQGNRIPH
NSGSSSKQPSTLLMPRIINWAVDSQPKWTDLQKKVFESPELEICPLLATKEEMAMPWFEPFLEEEKISSLRLKQNFRKVDQSHMRLLHFKRDLIVYKKKKMRMKKTQMLV
GWANFNPKKKNDEHEGDEGDGNKQHQRTPPSLVNKQTEQLSEEKE