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PI0001981 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001981
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionSWIM-type domain-containing protein
Genome locationchr06:16699595..16700346
RNA-Seq ExpressionPI0001981
SyntenyPI0001981
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0041167.1 uncharacterized protein E6C27_scaffold128G00980 [Cucumis melo var. makuwa]6.8e-0627Show/hide
Query:  VVGFQCYMNGNIINGSSGIEYDVQPC--LDINVLRQIEFNQFIEALCDALSID-RNNGVEIIFRYGSYM-AGSTFYIPISLLSEPDLRFMMSNAPPLPHT
        ++GF  ++NGN+I+GS GI+YD   C    I+V   I F QFIE +  ++ ID R + +EII+R+     +G   ++P  + +E  ++ M S A P+ + 
Subjt:  VVGFQCYMNGNIINGSSGIEYDVQPC--LDINVLRQIEFNQFIEALCDALSID-RNNGVEIIFRYGSYM-AGSTFYIPISLLSEPDLRFMMSNAPPLPHT

Query:  VELYISQPNLPNSPRMIENINEFETCNEEDDC---------------SDPTMATNAEEVEVDDDGSDLDDNSYKYKRNNKEGEKRKSRRTTLHLDIKKSI
        V LY++   +     +  N+N    C  ED                  D  M  N + ++   +  D  D   ++  + +E E   +  T + +D+  SI
Subjt:  VELYISQPNLPNSPRMIENINEFETCNEEDDC---------------SDPTMATNAEEVEVDDDGSDLDDNSYKYKRNNKEGEKRKSRRTTLHLDIKKSI

TYK18693.1 hypothetical protein E5676_scaffold481G00410 [Cucumis melo var. makuwa]6.8e-1470.77Show/hide
Query:  MSNAPPLPHTVELYISQPNLPNSPRMIENINEFETCNEED-DCSDPTMATNAEEVEVDDDGSDLD
        MSNAPPLPH VELYISQPNL +S  +IE  NEF+TCN E  DC DPT+ATN E  EVDDD SD+D
Subjt:  MSNAPPLPHTVELYISQPNLPNSPRMIENINEFETCNEED-DCSDPTMATNAEEVEVDDDGSDLD

XP_023750776.1 uncharacterized protein LOC111899128 [Lactuca sativa]7.5e-0536.05Show/hide
Query:  VGFQCYMNGNIINGSSGIEYDVQPCLDINVLRQIEFNQFIEALCDALSIDRNN-GVEIIFRYGSYMAGSTFYIPISLLSEPDLRFM
        V F CY +G I +G  GI YD  P   I V R I+FN  +  +  A SID+    +++I RY S +     YIP+ +  + D+  M
Subjt:  VGFQCYMNGNIINGSSGIEYDVQPCLDINVLRQIEFNQFIEALCDALSIDRNN-GVEIIFRYGSYMAGSTFYIPISLLSEPDLRFM

XP_023763615.1 uncharacterized protein LOC111912107 [Lactuca sativa]7.5e-0536.05Show/hide
Query:  VGFQCYMNGNIINGSSGIEYDVQPCLDINVLRQIEFNQFIEALCDALSIDRNN-GVEIIFRYGSYMAGSTFYIPISLLSEPDLRFM
        V F CY +G I +G  GI YD  P   I V R I+FN  +  +  A SID+    +++I RY S +     YIP+ +  + D+  M
Subjt:  VGFQCYMNGNIINGSSGIEYDVQPCLDINVLRQIEFNQFIEALCDALSIDRNN-GVEIIFRYGSYMAGSTFYIPISLLSEPDLRFM

XP_038877923.1 uncharacterized protein LOC120070133 [Benincasa hispida]6.7e-3857.5Show/hide
Query:  MDVVGFQCYMNGNIINGSSGIEYDVQPCLDINVLRQIEFNQFIEALCDALSIDRNNGVEIIFRYGSYMAGSTFYIPISLLSEPDLRFMMSNAPPLPHTVE
        MDVV F CYM+GNI+NG SGIEYD QP L IN+ RQ +FN  I+   DA SI+R++ VE+IFRYGSY+A STF+IPISL S+ D++FMMSNAP  P+ VE
Subjt:  MDVVGFQCYMNGNIINGSSGIEYDVQPCLDINVLRQIEFNQFIEALCDALSIDRNNGVEIIFRYGSYMAGSTFYIPISLLSEPDLRFMMSNAPPLPHTVE

Query:  LYISQPNLPNSPRMIENIN--EFETCNEEDDCSDPTMATNAEEVEVDDDGSDLDDNSYKY
        LYISQP++P+     E +   E E+   ED+  DPT+ATN EEV++DDD  DLD  S ++
Subjt:  LYISQPNLPNSPRMIENIN--EFETCNEEDDCSDPTMATNAEEVEVDDDGSDLDDNSYKY

TrEMBL top hitse value%identityAlignment
A0A438HFK5 SWIM-type domain-containing protein6.2e-0531.37Show/hide
Query:  CYMNGNIINGSSGIEYDVQPCLDINVLRQIEFNQFIEALCDALSIDRNNG-VEIIFRYGSYMA---GSTFYIPISLLSEPDLRFMMSNAPPLP--HTVEL
        CY +G II+G +G+ Y   P   + V   I++++  + LC  +SIDR +  + +IFRY   M+   G+  YI + +  + D+R M      +P  +T+E+
Subjt:  CYMNGNIINGSSGIEYDVQPCLDINVLRQIEFNQFIEALCDALSIDRNNG-VEIIFRYGSYMA---GSTFYIPISLLSEPDLRFMMSNAPPLP--HTVEL

Query:  YI
        Y+
Subjt:  YI

A0A5A7THR5 Uncharacterized protein3.3e-0627Show/hide
Query:  VVGFQCYMNGNIINGSSGIEYDVQPC--LDINVLRQIEFNQFIEALCDALSID-RNNGVEIIFRYGSYM-AGSTFYIPISLLSEPDLRFMMSNAPPLPHT
        ++GF  ++NGN+I+GS GI+YD   C    I+V   I F QFIE +  ++ ID R + +EII+R+     +G   ++P  + +E  ++ M S A P+ + 
Subjt:  VVGFQCYMNGNIINGSSGIEYDVQPC--LDINVLRQIEFNQFIEALCDALSID-RNNGVEIIFRYGSYM-AGSTFYIPISLLSEPDLRFMMSNAPPLPHT

Query:  VELYISQPNLPNSPRMIENINEFETCNEEDDC---------------SDPTMATNAEEVEVDDDGSDLDDNSYKYKRNNKEGEKRKSRRTTLHLDIKKSI
        V LY++   +     +  N+N    C  ED                  D  M  N + ++   +  D  D   ++  + +E E   +  T + +D+  SI
Subjt:  VELYISQPNLPNSPRMIENINEFETCNEEDDC---------------SDPTMATNAEEVEVDDDGSDLDDNSYKYKRNNKEGEKRKSRRTTLHLDIKKSI

A0A5D3D569 Uncharacterized protein3.3e-1470.77Show/hide
Query:  MSNAPPLPHTVELYISQPNLPNSPRMIENINEFETCNEED-DCSDPTMATNAEEVEVDDDGSDLD
        MSNAPPLPH VELYISQPNL +S  +IE  NEF+TCN E  DC DPT+ATN E  EVDDD SD+D
Subjt:  MSNAPPLPHTVELYISQPNLPNSPRMIENINEFETCNEED-DCSDPTMATNAEEVEVDDDGSDLD

A5B5G3 SWIM-type domain-containing protein6.9e-0426.03Show/hide
Query:  CYMNGNIINGSSGIEYDVQPCLDINVLRQIEFNQFIEALCDALSIDRNNG-VEIIFRYGSYMA---GSTFYIPISLLSEPDLRFMMSNAPPLP--HTVEL
        CY +G II+G +G+ Y   P   + V   I++++  + LC  +SIDR +  + +IFRY   M+   G+  YI + +  + D+R M      +P  +T+E+
Subjt:  CYMNGNIINGSSGIEYDVQPCLDINVLRQIEFNQFIEALCDALSIDRNNG-VEIIFRYGSYMA---GSTFYIPISLLSEPDLRFMMSNAPPLP--HTVEL

Query:  YISQPNLPNSPRMIENINEFETCNEEDDCSDPTMATNAEEVEVDDD
        Y+      +S  +  + +  +     DD   P    +A +++  D+
Subjt:  YISQPNLPNSPRMIENINEFETCNEEDDCSDPTMATNAEEVEVDDD

A5BXI2 SWIM-type domain-containing protein1.1e-0431.37Show/hide
Query:  CYMNGNIINGSSGIEYDVQPCLDINVLRQIEFNQFIEALCDALSIDRNNG-VEIIFRYGSYMA---GSTFYIPISLLSEPDLRFMMSNAPPLP--HTVEL
        CY +G II+G +G+ Y   P   + V   I++++  + LC  +SIDR +  + +IFRY   M+   G+  YI + +  + D+R M      +P  +T+E+
Subjt:  CYMNGNIINGSSGIEYDVQPCLDINVLRQIEFNQFIEALCDALSIDRNNG-VEIIFRYGSYMA---GSTFYIPISLLSEPDLRFMMSNAPPLP--HTVEL

Query:  YI
        Y+
Subjt:  YI

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACGTTGTGGGATTTCAATGCTACATGAATGGAAATATTATTAACGGGTCATCTGGTATTGAATATGACGTTCAACCATGTTTGGACATAAATGTTCTCCGTCAAAT
TGAATTCAACCAATTTATTGAGGCATTATGTGATGCTTTGTCTATAGACAGAAATAATGGGGTAGAGATAATATTTAGGTATGGTAGTTACATGGCGGGGTCCACATTCT
ACATTCCCATCTCTTTACTTAGTGAACCTGACTTAAGGTTTATGATGAGCAATGCTCCACCCCTTCCACATACAGTGGAACTTTATATTTCTCAACCAAATTTGCCCAAT
TCACCTCGAATGATTGAAAATATCAACGAGTTTGAAACTTGTAATGAGGAAGATGATTGTTCCGACCCGACTATGGCTACAAATGCAGAGGAGGTTGAAGTAGACGATGA
TGGTAGTGATCTAGATGATAACTCGTATAAATACAAGCGAAACAATAAGGAAGGCGAAAAGAGGAAAAGTAGGCGAACCACGTTACATCTAGACATCAAGAAGAGCATCT
TGCGAGCTAAAGCCAAAGACATGCTGCCAACACAACACTATGCGACGATGACTCGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGACGTTGTGGGATTTCAATGCTACATGAATGGAAATATTATTAACGGGTCATCTGGTATTGAATATGACGTTCAACCATGTTTGGACATAAATGTTCTCCGTCAAAT
TGAATTCAACCAATTTATTGAGGCATTATGTGATGCTTTGTCTATAGACAGAAATAATGGGGTAGAGATAATATTTAGGTATGGTAGTTACATGGCGGGGTCCACATTCT
ACATTCCCATCTCTTTACTTAGTGAACCTGACTTAAGGTTTATGATGAGCAATGCTCCACCCCTTCCACATACAGTGGAACTTTATATTTCTCAACCAAATTTGCCCAAT
TCACCTCGAATGATTGAAAATATCAACGAGTTTGAAACTTGTAATGAGGAAGATGATTGTTCCGACCCGACTATGGCTACAAATGCAGAGGAGGTTGAAGTAGACGATGA
TGGTAGTGATCTAGATGATAACTCGTATAAATACAAGCGAAACAATAAGGAAGGCGAAAAGAGGAAAAGTAGGCGAACCACGTTACATCTAGACATCAAGAAGAGCATCT
TGCGAGCTAAAGCCAAAGACATGCTGCCAACACAACACTATGCGACGATGACTCGCTAA
Protein sequenceShow/hide protein sequence
MDVVGFQCYMNGNIINGSSGIEYDVQPCLDINVLRQIEFNQFIEALCDALSIDRNNGVEIIFRYGSYMAGSTFYIPISLLSEPDLRFMMSNAPPLPHTVELYISQPNLPN
SPRMIENINEFETCNEEDDCSDPTMATNAEEVEVDDDGSDLDDNSYKYKRNNKEGEKRKSRRTTLHLDIKKSILRAKAKDMLPTQHYATMTR