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PI0001989 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001989
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionB3 domain-containing transcription factor LEC2
Genome locationchr04:2080321..2080527
RNA-Seq ExpressionPI0001989
SyntenyPI0001989
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052680.1 B3 domain-containing transcription factor LEC2 [Cucumis melo var. makuwa]5.1e-2282.35Show/hide
Query:  MINPTNSINYKEQLILDDFQGINNNNNNNINNGNVGFEDCFGGLDTLPEVSGFKFPLFDYFTSNNDTT
        MI+ TN+INYKEQ+ILDDFQGINN+N    NNGNVGFEDCFGGLDTLPEVSGFKFPLFDYF  NN TT
Subjt:  MINPTNSINYKEQLILDDFQGINNNNNNNINNGNVGFEDCFGGLDTLPEVSGFKFPLFDYFTSNNDTT

KAG6604454.1 B3 domain-containing transcription factor LEC2, partial [Cucurbita argyrosperma subsp. sororia]5.6e-0559.02Show/hide
Query:  QGINN--NNNNNINNGNV----------GFEDCFGGLDTLPEVSGFKFPLFDYFTSNNDTT
        +GI N  NNNN   NGN           G EDCF GLDTLPEVSGFKFPLFDY   +ND T
Subjt:  QGINN--NNNNNINNGNV----------GFEDCFGGLDTLPEVSGFKFPLFDYFTSNNDTT

KGN49235.1 hypothetical protein Csa_002728 [Cucumis sativus]3.2e-2491.04Show/hide
Query:  MINPTNSINYKEQLILDDFQGINNNNNNNINNGNVGFEDCFGGLDTLPEVSGFKFPLFDYFTSNNDT
        MIN TN INYKEQLILDDFQGI NN NN+INNGNVGFEDCFGGLDTLPEVSGFKFPLFDYFTSNN T
Subjt:  MINPTNSINYKEQLILDDFQGINNNNNNNINNGNVGFEDCFGGLDTLPEVSGFKFPLFDYFTSNNDT

XP_011658520.1 B3 domain-containing transcription factor LEC2 [Cucumis sativus]3.2e-2491.04Show/hide
Query:  MINPTNSINYKEQLILDDFQGINNNNNNNINNGNVGFEDCFGGLDTLPEVSGFKFPLFDYFTSNNDT
        MIN TN INYKEQLILDDFQGI NN NN+INNGNVGFEDCFGGLDTLPEVSGFKFPLFDYFTSNN T
Subjt:  MINPTNSINYKEQLILDDFQGINNNNNNNINNGNVGFEDCFGGLDTLPEVSGFKFPLFDYFTSNNDT

XP_023003348.1 B3 domain-containing transcription factor LEC2-like [Cucurbita maxima]5.6e-0563.64Show/hide
Query:  NNNNNNNINNGN--VGFEDCFGGLDTLPEVSGFKFPLFDYFTSN
        NN+NN+N NNG    GFEDCFG L+ LPEVSGFKFP+ DY  ++
Subjt:  NNNNNNNINNGN--VGFEDCFGGLDTLPEVSGFKFPLFDYFTSN

TrEMBL top hitse value%identityAlignment
A0A0A0KHN2 Uncharacterized protein1.5e-2491.04Show/hide
Query:  MINPTNSINYKEQLILDDFQGINNNNNNNINNGNVGFEDCFGGLDTLPEVSGFKFPLFDYFTSNNDT
        MIN TN INYKEQLILDDFQGI NN NN+INNGNVGFEDCFGGLDTLPEVSGFKFPLFDYFTSNN T
Subjt:  MINPTNSINYKEQLILDDFQGINNNNNNNINNGNVGFEDCFGGLDTLPEVSGFKFPLFDYFTSNNDT

A0A5A7UBY7 B3 domain-containing transcription factor LEC22.5e-2282.35Show/hide
Query:  MINPTNSINYKEQLILDDFQGINNNNNNNINNGNVGFEDCFGGLDTLPEVSGFKFPLFDYFTSNNDTT
        MI+ TN+INYKEQ+ILDDFQGINN+N    NNGNVGFEDCFGGLDTLPEVSGFKFPLFDYF  NN TT
Subjt:  MINPTNSINYKEQLILDDFQGINNNNNNNINNGNVGFEDCFGGLDTLPEVSGFKFPLFDYFTSNNDTT

A0A6J1EJR4 B3 domain-containing transcription factor LEC21.0e-0458.62Show/hide
Query:  FQGINNNNNNNINN--------GNVGFEDCFGGLDTLPEVSGFKFPLFDYFTSNNDTT
        +  INNN   N N         GN G EDCF GLDTLPEVSGFKFPLFDY   +ND T
Subjt:  FQGINNNNNNNINN--------GNVGFEDCFGGLDTLPEVSGFKFPLFDYFTSNNDTT

A0A6J1IU08 B3 domain-containing transcription factor LEC2 isoform X21.8e-0457.14Show/hide
Query:  NNNNNNNINNGNV----------GFEDCFGGLDTLPEVSGFKFPLFDYFTSNNDTT
        N+NNN    NG+           G EDCF GLDTLPEVSGFKFPLFDY   +ND T
Subjt:  NNNNNNNINNGNV----------GFEDCFGGLDTLPEVSGFKFPLFDYFTSNNDTT

A0A6J1KW90 B3 domain-containing transcription factor LEC2-like2.7e-0563.64Show/hide
Query:  NNNNNNNINNGN--VGFEDCFGGLDTLPEVSGFKFPLFDYFTSN
        NN+NN+N NNG    GFEDCFG L+ LPEVSGFKFP+ DY  ++
Subjt:  NNNNNNNINNGN--VGFEDCFGGLDTLPEVSGFKFPLFDYFTSN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTAATCCCACAAATAGTATTAATTATAAGGAACAACTAATATTAGATGATTTCCAAGGGATTAATAATAATAATAACAATAATATTAATAATGGTAATGTGGGGTT
TGAAGATTGCTTTGGAGGCCTTGATACTCTTCCTGAAGTCAGTGGATTCAAGTTCCCTCTTTTTGATTATTTCACCAGTAACAATGACACAACCTGA
mRNA sequenceShow/hide mRNA sequence
ATGATTAATCCCACAAATAGTATTAATTATAAGGAACAACTAATATTAGATGATTTCCAAGGGATTAATAATAATAATAACAATAATATTAATAATGGTAATGTGGGGTT
TGAAGATTGCTTTGGAGGCCTTGATACTCTTCCTGAAGTCAGTGGATTCAAGTTCCCTCTTTTTGATTATTTCACCAGTAACAATGACACAACCTGA
Protein sequenceShow/hide protein sequence
MINPTNSINYKEQLILDDFQGINNNNNNNINNGNVGFEDCFGGLDTLPEVSGFKFPLFDYFTSNNDTT