CuGenDBv2

Gene ID	PI0001994
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Transcription factor bHLH36-like isoform X1
Genome location	chr11:12660570..12661967
RNA-Seq Expression	PI0001994
Synteny	PI0001994
Gene Ontology terms	GO:0006357 - regulation of transcription by RNA polymerase II (biological process) GO:2000112 - regulation of cellular macromolecule biosynthetic process (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0003700 - DNA-binding transcription factor activity (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	IPR011598 - Myc-type, basic helix-loop-helix (bHLH) domain IPR015660 - Achaete-scute transcription factor-related IPR036638 - Helix-loop-helix DNA-binding domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0062040.1 transcription factor bHLH36-like isoform X1 [Cucumis melo var. makuwa]

2.6e-78

93.26

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Query:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG
        MKSLYSKLNSLLPSHHSNDQLPRTV+DQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSST+SSSSYSAL ISQNRNVPELKIKEMG AVEVVL TG
Subjt:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG

Query:  LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERLNQLVYESKNEAEMPVS-SSQA
        LEDRSMFYETIRI NEERAEIINVSYSLLD+TI+YSLHAEIEDVVYDFGG KLIERLNQLVYE KNEAEM VS SSQA
Subjt:  LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERLNQLVYESKNEAEMPVS-SSQA

KAE8646851.1 hypothetical protein Csa_020734 [Cucumis sativus]

1.7e-69

89.29

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Query:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSST-SSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMT
        MKSLYSKL+SLLPSH  NDQLPRTVSDQIEAAINYIKSLE KLKQDEEKKE YLRRSK+AS ST SSSSSYSALPI+ NRNVPELKIKEMGPAVEVVL T
Subjt:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSST-SSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMT

Query:  GLEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGT-KLIERLNQLVYESKN
        GLEDRS+FY+TIRI NEERAEIINVSYSLLDNTI+YSLHAEIEDVV+DFGGT KLIERLNQLVYE KN
Subjt:  GLEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGT-KLIERLNQLVYESKN

XP_016900532.1 PREDICTED: transcription factor bHLH36-like isoform X1 [Cucumis melo]

7.6e-78

92.7

Show/hide

Query:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG
        MKSLYSKLNSLLPSHHSNDQLPRTV+DQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSST+SSSSYSAL ISQNRNVPELKIKEMG AVEVVL TG
Subjt:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG

Query:  LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERLNQLVYESKNEAEMPVSS-SQA
        LEDRSMFYETIRI NEERAEIINVSYSLLD+TI+YSLHAEIEDVVYDFGG KLIERLNQLVYE KNEAEM VS  SQA
Subjt:  LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERLNQLVYESKNEAEMPVSS-SQA

XP_016900533.1 PREDICTED: transcription factor bHLH36-like isoform X2 [Cucumis melo]

4.6e-75

91.57

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Query:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG
        MKSLYSKLNSLLPSHHSN  LPRTV+DQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSST+SSSSYSAL ISQNRNVPELKIKEMG AVEVVL TG
Subjt:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG

Query:  LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERLNQLVYESKNEAEMPVSS-SQA
        LEDRSMFYETIRI NEERAEIINVSYSLLD+TI+YSLHAEIEDVVYDFGG KLIERLNQLVYE KNEAEM VS  SQA
Subjt:  LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERLNQLVYESKNEAEMPVSS-SQA

XP_038902351.1 transcription factor bHLH162-like [Benincasa hispida]

1.7e-56

73.03

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Query:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG
        MKSLY+ LNSLLP  HSN +LP TV DQI+ AI YIKSLEI LK+DEEKKER LR+SK+    +SSSSSY+AL +S NRNVPELKIKEMG AVEVVL TG
Subjt:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG

Query:  LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERLNQLVYESKNEAE---MPVSSS
        LEDRS+FYE IRIF+EER EIIN+SYS+L+NTIIYSLH EIEDVVY+FGGTKLIERL +LV+E  N+ E   + VSSS
Subjt:  LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERLNQLVYESKNEAE---MPVSSS

TrEMBL top hits

e value

%identity

Alignment

A0A1S4DX24 transcription factor bHLH36-like isoform X1

3.7e-78

92.7

Show/hide

Query:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG
        MKSLYSKLNSLLPSHHSNDQLPRTV+DQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSST+SSSSYSAL ISQNRNVPELKIKEMG AVEVVL TG
Subjt:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG

Query:  LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERLNQLVYESKNEAEMPVSS-SQA
        LEDRSMFYETIRI NEERAEIINVSYSLLD+TI+YSLHAEIEDVVYDFGG KLIERLNQLVYE KNEAEM VS  SQA
Subjt:  LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERLNQLVYESKNEAEMPVSS-SQA

A0A1S4DX34 transcription factor bHLH36-like isoform X2

2.2e-75

91.57

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Query:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG
        MKSLYSKLNSLLPSHHSN  LPRTV+DQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSST+SSSSYSAL ISQNRNVPELKIKEMG AVEVVL TG
Subjt:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG

Query:  LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERLNQLVYESKNEAEMPVSS-SQA
        LEDRSMFYETIRI NEERAEIINVSYSLLD+TI+YSLHAEIEDVVYDFGG KLIERLNQLVYE KNEAEM VS  SQA
Subjt:  LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERLNQLVYESKNEAEMPVSS-SQA

A0A5A7V416 Transcription factor bHLH36-like isoform X1

1.3e-78

93.26

Show/hide

Query:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG
        MKSLYSKLNSLLPSHHSNDQLPRTV+DQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSST+SSSSYSAL ISQNRNVPELKIKEMG AVEVVL TG
Subjt:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG

Query:  LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERLNQLVYESKNEAEMPVS-SSQA
        LEDRSMFYETIRI NEERAEIINVSYSLLD+TI+YSLHAEIEDVVYDFGG KLIERLNQLVYE KNEAEM VS SSQA
Subjt:  LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERLNQLVYESKNEAEMPVS-SSQA

A0A5D3BZ69 Transcription factor bHLH36-like isoform X1

3.7e-78

92.7

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Query:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG
        MKSLYSKLNSLLPSHHSNDQLPRTV+DQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSST+SSSSYSAL ISQNRNVPELKIKEMG AVEVVL TG
Subjt:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG

Query:  LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERLNQLVYESKNEAEMPVSS-SQA
        LEDRSMFYETIRI NEERAEIINVSYSLLD+TI+YSLHAEIEDVVYDFGG KLIERLNQLVYE KNEAEM VS  SQA
Subjt:  LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERLNQLVYESKNEAEMPVSS-SQA

A0A6J1FXP8 transcription factor bHLH162-like

9.5e-50

66.29

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Query:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG
        MKSLYSKLNSLLP+HHSN +LP +V DQIE AI YIKSLE+KLK+DEEKKER+ RR        SSSSSY A   S+NRN PEL+IKEMG AVEVVL TG
Subjt:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG

Query:  L-EDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERLNQLVYESKNEAEMPVSSSQA
        L EDR +FYE I IF EERAEI+NVSYS++ N+++YSL+AEIEDVVY+FG TK  ER+ +LVY  +N+AEM  + S +
Subjt:  L-EDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERLNQLVYESKNEAEMPVSSSQA

SwissProt top hits

e value

%identity

Alignment

F4JIJ7 Transcription factor bHLH162

4.0e-21

37.8

Show/hide

Query:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIAS-SSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMT
        MKSLYS+L SLLP H S +  P T+ DQ++ A NYIK L++ +++  E+K   +  + +   +S  SSS  S++ +S  R +P+++I+E G    + L+T
Subjt:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIAS-SSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMT

Query:  GLEDRSMFYETIRIFNEE-RAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGG-TKLIERLNQLV
         LE + MF E IR+  EE  AEI +  YS++D+ + ++LH ++E+  +D+G  +++ ERL ++V
Subjt:  GLEDRSMFYETIRIFNEE-RAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGG-TKLIERLNQLV

Q9FLI1 Transcription factor bHLH36

6.2e-06

25.32

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Query:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG
        M SLY+ L SLLP H    +  R+ SDQ+  A+NYIK L+ K+K+   +++  +  S+ +   +S+      + +   +N   + +++    VE++L + 
Subjt:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG

Query:  -LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERL
            +  F   +++ +E    ++N   S++D+ ++Y++ AE+ D+       +L +RL
Subjt:  -LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERL

Arabidopsis top hits

e value

%identity

Alignment

AT4G20970.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

2.8e-22

37.8

Show/hide

Query:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIAS-SSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMT
        MKSLYS+L SLLP H S +  P T+ DQ++ A NYIK L++ +++  E+K   +  + +   +S  SSS  S++ +S  R +P+++I+E G    + L+T
Subjt:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIAS-SSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMT

Query:  GLEDRSMFYETIRIFNEE-RAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGG-TKLIERLNQLV
         LE + MF E IR+  EE  AEI +  YS++D+ + ++LH ++E+  +D+G  +++ ERL ++V
Subjt:  GLEDRSMFYETIRIFNEE-RAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGG-TKLIERLNQLV

AT5G51780.1 basic helix-loop-helix (bHLH) DNA-binding superfamily protein

4.4e-07

25.32

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Query:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG
        M SLY+ L SLLP H    +  R+ SDQ+  A+NYIK L+ K+K+   +++  +  S+ +   +S+      + +   +N   + +++    VE++L + 
Subjt:  MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTG

Query:  -LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERL
            +  F   +++ +E    ++N   S++D+ ++Y++ AE+ D+       +L +RL
Subjt:  -LEDRSMFYETIRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERL

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAATCTCTTTACTCCAAATTGAATTCCCTTCTTCCATCCCATCACTCAAATGATCAGTTGCCACGGACAGTTTCAGATCAGATAGAGGCAGCAATTAATTACATCAA
ATCATTAGAGATTAAGCTGAAACAGGATGAGGAGAAGAAGGAGAGATATTTAAGAAGATCCAAAATAGCATCGTCATCCACATCATCCTCATCGTCTTACTCCGCATTGC
CGATAAGCCAGAATAGGAATGTACCTGAATTGAAAATCAAAGAAATGGGCCCTGCTGTGGAGGTTGTTTTAATGACTGGGTTGGAGGATCGTTCAATGTTTTATGAGACT
ATTCGTATCTTTAACGAGGAACGAGCTGAGATCATCAATGTCAGTTATTCTCTTCTTGATAACACAATCATATATTCACTCCATGCTGAGATTGAAGATGTGGTGTATGA
CTTTGGAGGAACGAAACTAATAGAGAGGCTAAACCAATTGGTTTACGAATCCAAGAATGAAGCAGAAATGCCAGTTTCCAGCAGTCAGGCCTGA

mRNA sequence

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Protein sequence

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MKSLYSKLNSLLPSHHSNDQLPRTVSDQIEAAINYIKSLEIKLKQDEEKKERYLRRSKIASSSTSSSSSYSALPISQNRNVPELKIKEMGPAVEVVLMTGLEDRSMFYET
IRIFNEERAEIINVSYSLLDNTIIYSLHAEIEDVVYDFGGTKLIERLNQLVYESKNEAEMPVSSSQA

PI0001994 (gene) of Melon (PI 482460) v1 genome