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PI0001999 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0001999
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr08:6369046..6369664
RNA-Seq ExpressionPI0001999
SyntenyPI0001999
Gene Ontology termsGO:0006259 - DNA metabolic process (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0008270 - zinc ion binding (molecular function)
GO:0016779 - nucleotidyltransferase activity (molecular function)
GO:0016787 - hydrolase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
ADJ18449.1 gag/pol protein, partial [Bryonia dioica]3.5e-5171.35Show/hide
Query:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEAN----------------QTNASLN
        M DVLAKK++S+A  K IMDSL EM GQP WSLR+E IKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNG PIDEAN                QTNASLN
Subjt:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEAN----------------QTNASLN

Query:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPS--QMKK--KGKTPKSSKGKK
        KIEF LTTLLNELQ FQN T+ KGKEVE NVA  +++FIRGSSSK KVGPS  QMKK  KGK P +SK KK
Subjt:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPS--QMKK--KGKTPKSSKGKK

KAA0032130.1 gag/pol protein [Cucumis melo var. makuwa]2.4e-5572.25Show/hide
Query:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEAN----------------QTNASLN
        M DVLAKK+ESLAM K+IMDSL EM GQP WSLR+E IK+IYTK+MKEGTSVREHV+DM++HFNIA+VNGSPI+EAN                QTN SL+
Subjt:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEAN----------------QTNASLN

Query:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPSQM--KKKGKTPKSSKGKKVVKG
        KIEFTLTTLLNELQ FQN TIGKGKEVE NVATIEK+ +RGSSSK++VGPS M  K+KGKTPK+SKGKKV KG
Subjt:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPSQM--KKKGKTPKSSKGKKVVKG

KAA0035261.1 gag/pol protein [Cucumis melo var. makuwa]2.2e-5372.25Show/hide
Query:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEANQT----------------NASLN
        M DVLAKK+ESLAM K+IMDSL EM GQ  WSLR++ IK+IYTK+MKEGTSVREHVLDMMMHFNIAEVNG PI+EANQ                 NASLN
Subjt:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEANQT----------------NASLN

Query:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPSQMKK--KGKTPKSSKGKKVVKG
        KI+FTLTTLLNELQ FQN T+ KGKEVE NVAT EK+ + GSSSKTKVGPS MKK  KGKTPK+SK KKVVKG
Subjt:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPSQMKK--KGKTPKSSKGKKVVKG

KAA0063718.1 pol protein [Cucumis melo var. makuwa]1.2e-5169.49Show/hide
Query:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEAN----------------QTNASLN
        M DVLAKKYE LA TK+IMDSL EM GQP WSLR+E IK+IYTK+MKEGTSVREHVLDMMMHFNI EVN  PI+EAN                QTNASLN
Subjt:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEAN----------------QTNASLN

Query:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPSQMKK--KGKTPKSSKGKKVVKGIAQS
        KIEFTLTTLLNELQ FQN T+GKGKEVE NVAT EKE + GSS KT+V    MKK  KGK+PK+S+ KKVVKG   S
Subjt:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPSQMKK--KGKTPKSSKGKKVVKGIAQS

TYK27112.1 gag/pol protein [Cucumis melo var. makuwa]2.1e-5170.52Show/hide
Query:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEAN----------------QTNASLN
        M DVLAKKYE LA TK+IMDSL EM GQP WSLR+E IK+IYTK+MKEGTSVREHVLDMMMHFNI EVN  PI+EAN                QTNASLN
Subjt:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEAN----------------QTNASLN

Query:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPSQMKK--KGKTPKSSKGKKVVKG
        KIEFTLTTLLNELQ FQN T+GKGKEVE NVAT EKE + GSS KT+V    MKK  KGK+PK+S+ KKVVKG
Subjt:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPSQMKK--KGKTPKSSKGKKVVKG

TrEMBL top hitse value%identityAlignment
A0A5A7V810 Reverse transcriptase5.9e-5269.49Show/hide
Query:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEAN----------------QTNASLN
        M DVLAKKYE LA TK+IMDSL EM GQP WSLR+E IK+IYTK+MKEGTSVREHVLDMMMHFNI EVN  PI+EAN                QTNASLN
Subjt:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEAN----------------QTNASLN

Query:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPSQMKK--KGKTPKSSKGKKVVKGIAQS
        KIEFTLTTLLNELQ FQN T+GKGKEVE NVAT EKE + GSS KT+V    MKK  KGK+PK+S+ KKVVKG   S
Subjt:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPSQMKK--KGKTPKSSKGKKVVKGIAQS

A0A5D3C8J9 Gag/pol protein1.1e-5372.25Show/hide
Query:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEANQT----------------NASLN
        M DVLAKK+ESLAM K+IMDSL EM GQ  WSLR++ IK+IYTK+MKEGTSVREHVLDMMMHFNIAEVNG PI+EANQ                 NASLN
Subjt:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEANQT----------------NASLN

Query:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPSQMKK--KGKTPKSSKGKKVVKG
        KI+FTLTTLLNELQ FQN T+ KGKEVE NVAT EK+ + GSSSKTKVGPS MKK  KGKTPK+SK KKVVKG
Subjt:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPSQMKK--KGKTPKSSKGKKVVKG

A0A5D3CSI7 Gag/pol protein1.1e-5572.25Show/hide
Query:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEAN----------------QTNASLN
        M DVLAKK+ESLAM K+IMDSL EM GQP WSLR+E IK+IYTK+MKEGTSVREHV+DM++HFNIA+VNGSPI+EAN                QTN SL+
Subjt:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEAN----------------QTNASLN

Query:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPSQM--KKKGKTPKSSKGKKVVKG
        KIEFTLTTLLNELQ FQN TIGKGKEVE NVATIEK+ +RGSSSK++VGPS M  K+KGKTPK+SKGKKV KG
Subjt:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPSQM--KKKGKTPKSSKGKKVVKG

A0A5D3DUD1 Gag/pol protein1.0e-5170.52Show/hide
Query:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEAN----------------QTNASLN
        M DVLAKKYE LA TK+IMDSL EM GQP WSLR+E IK+IYTK+MKEGTSVREHVLDMMMHFNI EVN  PI+EAN                QTNASLN
Subjt:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEAN----------------QTNASLN

Query:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPSQMKK--KGKTPKSSKGKKVVKG
        KIEFTLTTLLNELQ FQN T+GKGKEVE NVAT EKE + GSS KT+V    MKK  KGK+PK+S+ KKVVKG
Subjt:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPSQMKK--KGKTPKSSKGKKVVKG

E2GK51 Gag/pol protein (Fragment)1.7e-5171.35Show/hide
Query:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEAN----------------QTNASLN
        M DVLAKK++S+A  K IMDSL EM GQP WSLR+E IKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNG PIDEAN                QTNASLN
Subjt:  MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEAN----------------QTNASLN

Query:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPS--QMKK--KGKTPKSSKGKK
        KIEF LTTLLNELQ FQN T+ KGKEVE NVA  +++FIRGSSSK KVGPS  QMKK  KGK P +SK KK
Subjt:  KIEFTLTTLLNELQIFQNFTIGKGKEVEENVATIEKEFIRGSSSKTKVGPS--QMKK--KGKTPKSSKGKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTTGATGTTTTGGCAAAGAAATATGAATCCTTAGCCATGACTAAACAGATTATGGATTCATTGAGCGAGATGTCTGGTCAGCCTTTATGGTCCCTCAGATACGAAGT
AATTAAGCATATTTATACCAAGCGAATGAAGGAAGGGACCTCTGTTAGAGAACATGTCCTGGACATGATGATGCACTTCAATATCGCTGAAGTAAATGGCAGTCCCATCG
ATGAGGCAAATCAGACGAACGCGTCTCTAAATAAAATAGAGTTCACTTTGACCACCCTTCTAAATGAGCTCCAGATATTCCAGAACTTTACTATAGGTAAAGGGAAGGAA
GTGGAAGAAAATGTTGCTACCATAGAGAAAGAGTTTATAAGAGGATCGTCCTCTAAAACTAAAGTTGGACCTTCACAAATGAAAAAGAAAGGGAAGACTCCCAAGAGTAG
TAAGGGAAAGAAAGTTGTGAAAGGAATTGCCCAAAGTACCTTGCTGAGAAGAAAGCTAAGAAGGAAGCACAAGGTAAATATGATTTACTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTTGATGTTTTGGCAAAGAAATATGAATCCTTAGCCATGACTAAACAGATTATGGATTCATTGAGCGAGATGTCTGGTCAGCCTTTATGGTCCCTCAGATACGAAGT
AATTAAGCATATTTATACCAAGCGAATGAAGGAAGGGACCTCTGTTAGAGAACATGTCCTGGACATGATGATGCACTTCAATATCGCTGAAGTAAATGGCAGTCCCATCG
ATGAGGCAAATCAGACGAACGCGTCTCTAAATAAAATAGAGTTCACTTTGACCACCCTTCTAAATGAGCTCCAGATATTCCAGAACTTTACTATAGGTAAAGGGAAGGAA
GTGGAAGAAAATGTTGCTACCATAGAGAAAGAGTTTATAAGAGGATCGTCCTCTAAAACTAAAGTTGGACCTTCACAAATGAAAAAGAAAGGGAAGACTCCCAAGAGTAG
TAAGGGAAAGAAAGTTGTGAAAGGAATTGCCCAAAGTACCTTGCTGAGAAGAAAGCTAAGAAGGAAGCACAAGGTAAATATGATTTACTAG
Protein sequenceShow/hide protein sequence
MFDVLAKKYESLAMTKQIMDSLSEMSGQPLWSLRYEVIKHIYTKRMKEGTSVREHVLDMMMHFNIAEVNGSPIDEANQTNASLNKIEFTLTTLLNELQIFQNFTIGKGKE
VEENVATIEKEFIRGSSSKTKVGPSQMKKKGKTPKSSKGKKVVKGIAQSTLLRRKLRRKHKVNMIY