CuGenDBv2

Gene ID	PI0002007
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	serine/arginine-rich splicing factor 11 isoform X1
Genome location	chr02:666773..669878
RNA-Seq Expression	PI0002007
Synteny	PI0002007
Gene Ontology terms	GO:0016853 - isomerase activity (molecular function)
InterPro domains	NA

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_008450603.1 PREDICTED: peptidyl-prolyl cis-trans isomerase G [Cucumis melo]

2.4e-71

97.25

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Query:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK
        MAA+SSA TS SSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDY+RSNSSS+SEPETSSRSKRHKKNDRTKKDK
Subjt:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_011659818.1 NKAP family protein isoform X2 [Cucumis sativus]

3.3e-68

95.05

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Query:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK
        MAATSSAATS SSDSSSSSSRRRRRR+TRR+KDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSS+DSESDYSR   SS+SEPETSSRSKRHKKNDRTKKDK
Subjt:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_022136184.1 serine/arginine-rich splicing factor 11 [Momordica charantia]

4.0e-66

92.35

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Query:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK
        MAA+SS+ATS++SDSSSSSSRRRRRRR+RR+KDRD LRIRKKSRSHSKR RRHRRSSSDSLSSSDSES+YSRS SSSQSEPETS RSKRHKKNDRTKKDK
Subjt:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERS+SHHHKRRKHKAKEKQPEE SSSPVQLSKFLAREKDDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_031738322.1 NKAP family protein isoform X1 [Cucumis sativus]

3.0e-69

96.15

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Query:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK
        MAATSSAATS SSDSSSSSSRRRRRR+TRR+KDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSS+DSESDYSR NSSS+SEPETSSRSKRHKKNDRTKKDK
Subjt:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

XP_038879353.1 NKAP family protein [Benincasa hispida]

4.6e-70

94.51

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Query:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK
        MAA+SS+ATSY+SDSSSSSSRRRRRRR RREKDRDTLR+RKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSR+NSSSQSEPETS RSKRHK+NDR K+DK
Subjt:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LVZ3 Uncharacterized protein

1.6e-68

95.05

Show/hide

Query:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK
        MAATSSAATS SSDSSSSSSRRRRRR+TRR+KDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSS+DSESDYSR   SS+SEPETSSRSKRHKKNDRTKKDK
Subjt:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEE KRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A1S3BQ85 peptidyl-prolyl cis-trans isomerase G

1.2e-71

97.25

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Query:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK
        MAA+SSA TS SSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDY+RSNSSS+SEPETSSRSKRHKKNDRTKKDK
Subjt:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1C3K8 serine/arginine-rich splicing factor 11

2.0e-66

92.35

Show/hide

Query:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK
        MAA+SS+ATS++SDSSSSSSRRRRRRR+RR+KDRD LRIRKKSRSHSKR RRHRRSSSDSLSSSDSES+YSRS SSSQSEPETS RSKRHKKNDRTKKDK
Subjt:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERS+SHHHKRRKHKAKEKQPEE SSSPVQLSKFLAREKDDG RRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1HZG5 probable splicing factor, arginine/serine-rich 7 isoform X1

1.6e-60

90.16

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Query:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK
        MAA+SS+A+ Y+SDSSSSSSRRRRRRRTRREKDRD LRIRKKSRSHSKR RRHRRSSS+SLSSSDSESDYSRS+SSSQSEPE S RSKRHKKND TK  K
Subjt:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ERERS+S HHKRRKHKAKEKQPEE SSSPVQLSKFLARE DDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

A0A6J1I4D4 NKAP family protein isoform X2

6.1e-60

89.62

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Query:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK
        MAA+SS+A+ Y+SDSSSSSSRRRRRRRTRREKDRD LRIRKKSRSHSKR RRHRRSSS+SLSSSDSESDYSRS+SSSQSEPE S RSKRHKKND TKK  
Subjt:  MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
         RERS+S HHKRRKHKAKEKQPEE SSSPVQLSKFLARE DDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
Subjt:  ERERSRSHHHKRRKHKAKEKQPEE-SSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits

e value

%identity

Alignment

AT5G27860.1 unknown protein

1.1e-32

60.11

Show/hide

Query:  AATSSAATSYSSDSSSSSSRRRRRRRTRR-EKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK
        A++SS+++  SSDSS S  RR+ RR  RR ++DRD+L++RKKSRS SK+ RR R+ SSDS       SD S S+SSS+S      +S+RHKK+++ KK K
Subjt:  AATSSAATSYSSDSSSSSSRRRRRRRTRR-EKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEK-QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ++ERS+SH HKR K++ ++K + E SS PV+LSKFL R+KDDG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+SFD
Subjt:  ERERSRSHHHKRRKHKAKEK-QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

AT5G27860.2 unknown protein

1.1e-32

60.11

Show/hide

Query:  AATSSAATSYSSDSSSSSSRRRRRRRTRR-EKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK
        A++SS+++  SSDSS S  RR+ RR  RR ++DRD+L++RKKSRS SK+ RR R+ SSDS       SD S S+SSS+S      +S+RHKK+++ KK K
Subjt:  AATSSAATSYSSDSSSSSSRRRRRRRTRR-EKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDK

Query:  ERERSRSHHHKRRKHKAKEK-QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD
        ++ERS+SH HKR K++ ++K + E SS PV+LSKFL R+KDDG RRSAVSGKKILLK+DKSKEDKA E+KRNELLKFLN+SFD
Subjt:  ERERSRSHHHKRRKHKAKEK-QPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTGCCACATCTTCGGCTGCAACATCCTATTCTTCTGATTCATCGTCTTCTTCTTCTCGCCGTCGTCGTCGCCGGAGAACTCGTCGTGAAAAAGATCGGGACACGCT
TAGGATTCGAAAGAAGTCTCGCTCTCATTCCAAACGCCATCGCAGGCATCGCCGCTCCTCCTCCGACTCTCTCTCTTCCTCTGACTCCGAATCCGATTACTCCCGAAGCA
ATAGCTCTTCTCAAAGTGAGCCTGAAACATCAAGCCGTTCAAAGCGGCATAAGAAGAATGATAGAACAAAGAAGGATAAGGAGAGGGAGCGAAGTAGGAGTCATCACCAT
AAAAGGCGTAAACATAAAGCTAAAGAGAAACAACCAGAGGAGAGTAGTAGCCCTGTGCAGCTGTCTAAGTTTTTAGCACGGGAGAAGGATGATGGTACACGGCGAAGTGC
TGTCTCTGGCAAAAAGATTTTGTTGAAACTTGACAAATCAAAGGAAGACAAAGCTGAGGAAAACAAAAGAAATGAATTGCTGAAATTCTTGAACTCTAGCTTTGACTAA

mRNA sequence

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AAACAATGGTAATCTTTACATAAGCTTACACCGAGGGTTTCCTAAAACACAAGAGAAGCGCGACTTTCCCTTACCCGCCGGCACCGATGATTTATATAGCCTCACTGTAA
ATTGTGATATATTTGCTGATCAATGGCTGCCACATCTTCGGCTGCAACATCCTATTCTTCTGATTCATCGTCTTCTTCTTCTCGCCGTCGTCGTCGCCGGAGAACTCGTC
GTGAAAAAGATCGGGACACGCTTAGGATTCGAAAGAAGTCTCGCTCTCATTCCAAACGCCATCGCAGGCATCGCCGCTCCTCCTCCGACTCTCTCTCTTCCTCTGACTCC
GAATCCGATTACTCCCGAAGCAATAGCTCTTCTCAAAGTGAGCCTGAAACATCAAGCCGTTCAAAGCGGCATAAGAAGAATGATAGAACAAAGAAGGATAAGGAGAGGGA
GCGAAGTAGGAGTCATCACCATAAAAGGCGTAAACATAAAGCTAAAGAGAAACAACCAGAGGAGAGTAGTAGCCCTGTGCAGCTGTCTAAGTTTTTAGCACGGGAGAAGG
ATGATGGTACACGGCGAAGTGCTGTCTCTGGCAAAAAGATTTTGTTGAAACTTGACAAATCAAAGGAAGACAAAGCTGAGGAAAACAAAAGAAATGAATTGCTGAAATTC
TTGAACTCTAGCTTTGACTAAATGACTGTTGGAAATGAAGGAAAGAGGCATTGTTAGCTGCTGCATGAAAAAAATAGAGTTCTACCAACAGTTGTGTGGTGATTATGCTG
TAGGACATTTAAGCCTTTGAACTTTCTTCCCTTGATGTTTTGATGCCCATATGGATCAAGATCTTGTTTTAATTCCTTATGGACAGGAATTGAAATTGAAATGAAAAATT
ATTTACTGTCTTATTTTATTTTTTTGATGAAATGGAATGGGAAGAATGATTGATTATTAGTTATGATCAGAATTTATGGTACATTGATTATTTA

Protein sequence

Show/hide protein sequence

MAATSSAATSYSSDSSSSSSRRRRRRRTRREKDRDTLRIRKKSRSHSKRHRRHRRSSSDSLSSSDSESDYSRSNSSSQSEPETSSRSKRHKKNDRTKKDKERERSRSHHH
KRRKHKAKEKQPEESSSPVQLSKFLAREKDDGTRRSAVSGKKILLKLDKSKEDKAEENKRNELLKFLNSSFD

PI0002007 (gene) of Melon (PI 482460) v1 genome