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PI0002019 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002019
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionVQ domain-containing protein
Genome locationchr04:1112510..1112997
RNA-Seq ExpressionPI0002019
SyntenyPI0002019
Gene Ontology termsNA
InterPro domainsIPR008889 - VQ
IPR039608 - VQ motif-containing protein 1/10


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0052539.1 VQ motif-containing protein 1-like [Cucumis melo var. makuwa]1.3e-3887.25Show/hide
Query:  MENSKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSAAEDGGDNCRKRQRVVPQ-NNESTININQSVKMIHTTSFKDLDRLLALELPSMEDLNWIF
        M N KKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSS AEDGG+ CRKRQRVV + NNES ININQSVKMIHT SFKDLDRLL+LELPSMEDL+WI 
Subjt:  MENSKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSAAEDGGDNCRKRQRVVPQ-NNESTININQSVKMIHTTSFKDLDRLLALELPSMEDLNWIF

Query:  TD
        TD
Subjt:  TD

KAG6581431.1 hypothetical protein SDJN03_21433, partial [Cucurbita argyrosperma subsp. sororia]1.1e-2158.25Show/hide
Query:  MENSKKT--AEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSAAEDGGDNCRKRQRVVPQNNESTININQSVKMIHTTSFKDLDRLLALELPSMEDLNWI
        M +SK T    V+VVLIEYHH+ TD SNFKSVVQ+LTGKHSSA E GG  C KR RV  + +     +N++   +H+TSFKDLDR L L LP++EDLNWI
Subjt:  MENSKKT--AEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSAAEDGGDNCRKRQRVVPQNNESTININQSVKMIHTTSFKDLDRLLALELPSMEDLNWI

Query:  FTD
        + D
Subjt:  FTD

KAG7034723.1 hypothetical protein SDJN02_04453, partial [Cucurbita argyrosperma subsp. argyrosperma]6.3e-2258.25Show/hide
Query:  MENSKKT--AEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSAAEDGGDNCRKRQRVVPQNNESTININQSVKMIHTTSFKDLDRLLALELPSMEDLNWI
        M +SK T    V+VVLIEYHH+ TD S+FKSVVQ+LTGKHSSA E GG  CRKR RV  + +     +N++   +H+TSFKDLDR L L LP++EDLNWI
Subjt:  MENSKKT--AEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSAAEDGGDNCRKRQRVVPQNNESTININQSVKMIHTTSFKDLDRLLALELPSMEDLNWI

Query:  FTD
        + D
Subjt:  FTD

KGN49401.1 hypothetical protein Csa_003856 [Cucumis sativus]2.2e-3884.82Show/hide
Query:  QTAQRRI-MENSKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSAAE-DGGDNCRKRQRVVPQNN--ESTININQSVKMIHTTSFKDLDRLLALEL
        QT QR+  M NSKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHS AAE DGG+ CRKRQRVV QNN  ES  NINQ VKMIHT SFKDLDRLLALEL
Subjt:  QTAQRRI-MENSKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSAAE-DGGDNCRKRQRVVPQNN--ESTININQSVKMIHTTSFKDLDRLLALEL

Query:  PSMEDLNWIFTD
        PSMEDLNWI TD
Subjt:  PSMEDLNWIFTD

XP_038881537.1 VQ motif-containing protein 10-like [Benincasa hispida]2.7e-3374.77Show/hide
Query:  MENSKK--TAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSAAEDGGDNCRKRQRVVPQNNESTININ--------QSVKMIHTTSFKDLDRLLALELP
        M NSKK  TAEVRVV+IEYHHIQTD SNFKSVVQSLTGKHSSA E GG++C+KRQRVV +NNES INI+        +S KMI TTSFKDLDRLL+L LP
Subjt:  MENSKK--TAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSAAEDGGDNCRKRQRVVPQNNESTININ--------QSVKMIHTTSFKDLDRLLALELP

Query:  SMEDLNWIFTD
        SMEDLNWI+TD
Subjt:  SMEDLNWIFTD

TrEMBL top hitse value%identityAlignment
A0A0A0KNW8 VQ domain-containing protein1.1e-3884.82Show/hide
Query:  QTAQRRI-MENSKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSAAE-DGGDNCRKRQRVVPQNN--ESTININQSVKMIHTTSFKDLDRLLALEL
        QT QR+  M NSKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHS AAE DGG+ CRKRQRVV QNN  ES  NINQ VKMIHT SFKDLDRLLALEL
Subjt:  QTAQRRI-MENSKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSAAE-DGGDNCRKRQRVVPQNN--ESTININQSVKMIHTTSFKDLDRLLALEL

Query:  PSMEDLNWIFTD
        PSMEDLNWI TD
Subjt:  PSMEDLNWIFTD

A0A5D3CN21 VQ motif-containing protein 1-like6.2e-3987.25Show/hide
Query:  MENSKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSAAEDGGDNCRKRQRVVPQ-NNESTININQSVKMIHTTSFKDLDRLLALELPSMEDLNWIF
        M N KKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSS AEDGG+ CRKRQRVV + NNES ININQSVKMIHT SFKDLDRLL+LELPSMEDL+WI 
Subjt:  MENSKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSAAEDGGDNCRKRQRVVPQ-NNESTININQSVKMIHTTSFKDLDRLLALELPSMEDLNWIF

Query:  TD
        TD
Subjt:  TD

A0A6J1CYB0 uncharacterized protein LOC1110157002.8e-1551.4Show/hide
Query:  KTAEVRVVLIEYHHIQTDASNFKSVVQSLTG---KHSSAAED----GGDNCRKRQRVVPQ--NNESTININQSVKM--IHTTSFKDLDRLLALELPSMED
        K+A V+VVLIEYHH+QTD SNFKSVVQSLTG   + SSA  D     GD  ++R+R +     N++ I    +     +HT SFKDLDRLL   LPS++D
Subjt:  KTAEVRVVLIEYHHIQTDASNFKSVVQSLTG---KHSSAAED----GGDNCRKRQRVVPQ--NNESTININQSVKM--IHTTSFKDLDRLLALELPSMED

Query:  LNWIFTD
        L+WI+ D
Subjt:  LNWIFTD

A0A6J1EF02 VQ motif-containing protein 10-like1.6e-1552.25Show/hide
Query:  MENSKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSAAEDGGDNCRKRQRV--------VPQNNESTINI-NQSVKMIHTTSFKDLD-RLLALELP
        M NSK    V+VV IEYHHIQTD +NFKSVVQ+LTG +S+A    G N RK++RV          +  EST +    +   + +TSF+DLD  LL LELP
Subjt:  MENSKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSAAEDGGDNCRKRQRV--------VPQNNESTINI-NQSVKMIHTTSFKDLD-RLLALELP

Query:  SMEDLNWIFTD
        SMEDLNWI+ D
Subjt:  SMEDLNWIFTD

A0A6J1KT83 VQ motif-containing protein 101.9e-1653.15Show/hide
Query:  MENSKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSAAEDGGDNCRKRQRV--------VPQNNESTINI-NQSVKMIHTTSFKDLD-RLLALELP
        M NSK    V+VV IEYHHIQTD SNFKSVVQ+LTG +S+A    G N RK+ RV          +  EST++    +   + +TSF+DLD  LL LELP
Subjt:  MENSKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSAAEDGGDNCRKRQRV--------VPQNNESTINI-NQSVKMIHTTSFKDLD-RLLALELP

Query:  SMEDLNWIFTD
        SMEDLNWI+ D
Subjt:  SMEDLNWIFTD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACCCCAAACCGCACAAAGAAGAATAATGGAAAACTCTAAGAAGACGGCGGAAGTAAGGGTGGTGCTAATTGAGTACCACCATATTCAAACCGACGCTTCCAACTT
CAAGTCCGTCGTTCAAAGTCTCACTGGAAAGCATTCCTCCGCCGCAGAGGACGGAGGAGATAACTGCAGGAAGAGGCAGAGAGTGGTGCCTCAGAATAACGAGAGTACAA
TTAACATTAATCAAAGTGTTAAGATGATCCACACGACGTCGTTTAAGGACTTGGATCGCTTGCTCGCCCTTGAACTTCCTTCCATGGAAGATCTTAACTGGATTTTCACT
GATTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACCCCAAACCGCACAAAGAAGAATAATGGAAAACTCTAAGAAGACGGCGGAAGTAAGGGTGGTGCTAATTGAGTACCACCATATTCAAACCGACGCTTCCAACTT
CAAGTCCGTCGTTCAAAGTCTCACTGGAAAGCATTCCTCCGCCGCAGAGGACGGAGGAGATAACTGCAGGAAGAGGCAGAGAGTGGTGCCTCAGAATAACGAGAGTACAA
TTAACATTAATCAAAGTGTTAAGATGATCCACACGACGTCGTTTAAGGACTTGGATCGCTTGCTCGCCCTTGAACTTCCTTCCATGGAAGATCTTAACTGGATTTTCACT
GATTAATTTTAATTTTTTCTCTTTCTCATTTTATTATTTACTTTTTCTTTATTAAATTATATCTACGCTTATACATCATTTTTTTTTTCTTTCCCAATATCCCTTTGTAA
CATTCTTCATTTTTTTTATTGGGAATTTTTATTATTAGTATTATTGTA
Protein sequenceShow/hide protein sequence
MKPQTAQRRIMENSKKTAEVRVVLIEYHHIQTDASNFKSVVQSLTGKHSSAAEDGGDNCRKRQRVVPQNNESTININQSVKMIHTTSFKDLDRLLALELPSMEDLNWIFT
D