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PI0002020 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002020
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionCCHC-type domain-containing protein
Genome locationchr10:9466455..9466787
RNA-Seq ExpressionPI0002020
SyntenyPI0002020
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0015074 - DNA integration (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0060458.1 uncharacterized protein E6C27_scaffold22G002860 [Cucumis melo var. makuwa]2.4e-3774.55Show/hide
Query:  METTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLIT
        M T K V +AL+KK+DTEE  SKKY ++ YLR+QM DD+SVE QSHE+QKIA+EIISE M LD+QFQ+ +IIDKLPPLWKDFKNT+RHKTKEFSLESLIT
Subjt:  METTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLIT

Query:  QLRIEEDARK
        +LRIEE+ARK
Subjt:  QLRIEEDARK

XP_038883500.1 uncharacterized protein LOC120074448 isoform X1 [Benincasa hispida]1.1e-3776.85Show/hide
Query:  METTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLIT
        M+T K V +AL+KK+DTEE RSKKY ++ YL+FQM D++SVE QSHELQKIA+EII+E M LDEQFQIA+IIDKLPPLWKDFKNT+RHKTKEFSLESLIT
Subjt:  METTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLIT

Query:  QLRIEEDA
        +LRIEE+A
Subjt:  QLRIEEDA

XP_038883501.1 uncharacterized protein LOC120074448 isoform X2 [Benincasa hispida]1.1e-3776.85Show/hide
Query:  METTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLIT
        M+T K V +AL+KK+DTEE RSKKY ++ YL+FQM D++SVE QSHELQKIA+EII+E M LDEQFQIA+IIDKLPPLWKDFKNT+RHKTKEFSLESLIT
Subjt:  METTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLIT

Query:  QLRIEEDA
        +LRIEE+A
Subjt:  QLRIEEDA

XP_038883503.1 uncharacterized protein LOC120074448 isoform X4 [Benincasa hispida]1.1e-3776.85Show/hide
Query:  METTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLIT
        M+T K V +AL+KK+DTEE RSKKY ++ YL+FQM D++SVE QSHELQKIA+EII+E M LDEQFQIA+IIDKLPPLWKDFKNT+RHKTKEFSLESLIT
Subjt:  METTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLIT

Query:  QLRIEEDA
        +LRIEE+A
Subjt:  QLRIEEDA

XP_038902475.1 uncharacterized protein LOC120089128 [Benincasa hispida]3.7e-3876.36Show/hide
Query:  METTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLIT
        M+TTK+V +AL+KK+DT E  SKKY ++CYL+FQMMDD+ VE QSH+LQKIAYEII+E M LDEQFQ+AIIIDKLP LWKDFKNT+R+KTKE SLESLIT
Subjt:  METTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLIT

Query:  QLRIEEDARK
        QLRIEE+ARK
Subjt:  QLRIEEDARK

TrEMBL top hitse value%identityAlignment
A0A5A7TG34 Pol polyprotein2.0e-3773.64Show/hide
Query:  METTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLIT
        M T K V +AL+KK+DTEE  SKKY +N YLR++M DD+S+E QSHE+QKIA+EIISE M LD+QFQ+ +IIDKLPPLWKDFKNT+RHKTKEFSLESLIT
Subjt:  METTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLIT

Query:  QLRIEEDARK
        +LRIEE+ARK
Subjt:  QLRIEEDARK

A0A5A7UYY4 Uncharacterized protein1.2e-3774.55Show/hide
Query:  METTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLIT
        M T K V +AL+KK+DTEE  SKKY ++ YLR+QM DD+SVE QSHE+QKIA+EIISE M LD+QFQ+ +IIDKLPPLWKDFKNT+RHKTKEFSLESLIT
Subjt:  METTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLIT

Query:  QLRIEEDARK
        +LRIEE+ARK
Subjt:  QLRIEEDARK

A0A5D3DC59 Reverse transcriptase Ty1/copia-type domain-containing protein5.7e-3773.64Show/hide
Query:  METTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLIT
        M T K V +AL+KK+DT+E RSKKY ++ YLR+QM DD+SVE QSHE+QKIA+EIISE M LD+QFQ+A+IIDKLP LWKDFKNT+RHKTKEFSLESLIT
Subjt:  METTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLIT

Query:  QLRIEEDARK
        +L+IEE+ARK
Subjt:  QLRIEEDARK

A0A6A4QQH0 Putative RNA-directed DNA polymerase2.2e-3672.48Show/hide
Query:  ETTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLITQ
        ++ KLV +ALKKK+DTEE  +KKY ++ YL++QM DD+SVE QSHE+QKIA+EII+E M LDEQFQ+A+IIDKLPP WKDFKN +RHKTKEFSLESLIT+
Subjt:  ETTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLITQ

Query:  LRIEEDARK
        LRIEE+ARK
Subjt:  LRIEEDARK

A0A6A4R4U8 Putative RNA-directed DNA polymerase2.2e-3672.48Show/hide
Query:  ETTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLITQ
        ++ KLV +ALKKK+DTEE  +KKY ++ YL++QM DD+SVE QSHE+QKIA+EII+E M LDEQFQ+A+IIDKLPP WKDFKN +RHKTKEFSLESLIT+
Subjt:  ETTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLITQ

Query:  LRIEEDARK
        LRIEE+ARK
Subjt:  LRIEEDARK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G00980.1 zinc knuckle (CCHC-type) family protein7.2e-0835.9Show/hide
Query:  KLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDF
        K + + LK  +  +E +SK+  +  Y+ F+M+++R +  Q     KIA  I+S  M LDE F ++ II K PP W+ F
Subjt:  KLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGACAACAAAACTGGTATTGGAGGCCCTGAAGAAAAAACATGACACTGAGGAGGTTAGGTCAAAAAAATACACCATCAACTGTTACTTGAGATTCCAAATGATGGA
TGACAGATCAGTGGAAGTTCAGTCCCACGAACTACAAAAAATAGCCTACGAAATTATCAGCGAACGTATGACTCTTGATGAACAGTTTCAAATTGCAATCATTATTGATA
AATTGCCTCCTCTATGGAAGGATTTTAAAAACACCATAAGGCACAAGACCAAGGAATTCTCCTTGGAAAGTCTAATTACCCAACTAAGGATTGAGGAAGATGCCCGAAAG
TAG
mRNA sequenceShow/hide mRNA sequence
ATGGAGACAACAAAACTGGTATTGGAGGCCCTGAAGAAAAAACATGACACTGAGGAGGTTAGGTCAAAAAAATACACCATCAACTGTTACTTGAGATTCCAAATGATGGA
TGACAGATCAGTGGAAGTTCAGTCCCACGAACTACAAAAAATAGCCTACGAAATTATCAGCGAACGTATGACTCTTGATGAACAGTTTCAAATTGCAATCATTATTGATA
AATTGCCTCCTCTATGGAAGGATTTTAAAAACACCATAAGGCACAAGACCAAGGAATTCTCCTTGGAAAGTCTAATTACCCAACTAAGGATTGAGGAAGATGCCCGAAAG
TAG
Protein sequenceShow/hide protein sequence
METTKLVLEALKKKHDTEEVRSKKYTINCYLRFQMMDDRSVEVQSHELQKIAYEIISERMTLDEQFQIAIIIDKLPPLWKDFKNTIRHKTKEFSLESLITQLRIEEDARK