; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0002061 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002061
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein FAR1-RELATED SEQUENCE 2-like
Genome locationchr04:14802548..14806045
RNA-Seq ExpressionPI0002061
SyntenyPI0002061
Gene Ontology termsGO:0005488 - binding (molecular function)
InterPro domainsIPR004332 - Transposase, MuDR, plant


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038035.1 uncharacterized protein E6C27_scaffold36G002340 [Cucumis melo var. makuwa]5.5e-6063.87Show/hide
Query:  MALQRVTIVLDGIWIESSQYLDYRVVEVYVSLSSLLQGFLECIQGRLFPSSNLSISRLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDS
        MALQRV  V DG WIESS+Y+DY +++VYV +SS  Q F+ CIQ RLFP+  +S+SRLTVYW D NNSNLI+IV DKD SW MLV+SKF DN L +VVD+
Subjt:  MALQRVTIVLDGIWIESSQYLDYRVVEVYVSLSSLLQGFLECIQGRLFPSSNLSISRLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDS

Query:  VSVGATGSTANLNSEVPSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLKKTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW
        V     GST  L+SE+P ++ SH +  IIDL+AFES H GI I+VG MFR   VLKK IY+LA+NNSF L+T+RSNRTSFDIRCK  SCPW
Subjt:  VSVGATGSTANLNSEVPSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLKKTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW

KAA0039579.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]3.6e-5962.83Show/hide
Query:  MALQRVTIVLDGIWIESSQYLDYRVVEVYVSLSSLLQGFLECIQGRLFPSSNLSISRLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDS
        MALQ+V  V  G WIES +Y+DYR+++VYV +SS  Q F  CIQ RLFP+S + +SRLT+YW D NNS LIRI +DKDVSW MLVLSKFPDNYL +VVD+
Subjt:  MALQRVTIVLDGIWIESSQYLDYRVVEVYVSLSSLLQGFLECIQGRLFPSSNLSISRLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDS

Query:  VSVGATGSTANLNSEVPSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLKKTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW
        V    TG+T  L+SE+P ++ S   T IIDL+AFES H  I I+VG MFR KSVLKK IY+LA+N+SF L+T+ SNRTSF+IRCKD +CPW
Subjt:  VSVGATGSTANLNSEVPSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLKKTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW

KAA0064137.1 MuDRA-like transposase [Cucumis melo var. makuwa]7.0e-5559.69Show/hide
Query:  MALQRVTIVLDGIWIESSQYLDYRVVEVYVSLSSLLQGFLECIQGRLFPSSNLSISRLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDS
        MALQRV  V    WIES +Y+DYR+++VYV +SS  Q F  CIQ RLFP+S +S+SRLT+YW   NNS LI IV+DKDVSW MLVLSKFPDN L +VVD+
Subjt:  MALQRVTIVLDGIWIESSQYLDYRVVEVYVSLSSLLQGFLECIQGRLFPSSNLSISRLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDS

Query:  VSVGATGSTANLNSEVPSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLKKTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW
              G+T  ++S++P ++ S  +  IIDL+AFES +  I I+VG MFR KSVLKK IY+LA+N+SF L+T+RSNRTSF+IRCKD +CPW
Subjt:  VSVGATGSTANLNSEVPSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLKKTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW

KAA0067552.1 protein FAR1-RELATED SEQUENCE 2-like [Cucumis melo var. makuwa]3.7e-5660.73Show/hide
Query:  MALQRVTIVLDGIWIESSQYLDYRVVEVYVSLSSLLQGFLECIQGRLFPSSNLSISRLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDS
        MALQRV  V  G WIES +Y+DYR+++VYV +SS  Q F+ CIQ RLFP+S +SI  LT+YW D NNS LIRIV+DKDVSW MLVLSK PDN L +VVD+
Subjt:  MALQRVTIVLDGIWIESSQYLDYRVVEVYVSLSSLLQGFLECIQGRLFPSSNLSISRLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDS

Query:  VSVGATGSTANLNSEVPSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLKKTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW
              G+T  ++S++P ++ S     IIDL+AFES +  I I+VG MFR K+VLKK IY+LA+N+SF L+T+RSNRTSFDIRCKD SCPW
Subjt:  VSVGATGSTANLNSEVPSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLKKTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW

XP_038887125.1 uncharacterized protein LOC120077310 [Benincasa hispida]1.5e-4152.28Show/hide
Query:  MALQRVTIVLDGIWIESSQYLDYRVVEVYVSLSSLLQGFLECIQGRLFPSSNLSISRLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDS
        M LQRV ++ +G W E+SQY D+R  + Y+  +S  Q F+E IQG+LFPS  L+ISRL +YW   +NSNLI IVEDK + W ML+L   P+  L VVVD 
Subjt:  MALQRVTIVLDGIWIESSQYLDYRVVEVYVSLSSLLQGFLECIQGRLFPSSNLSISRLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDS

Query:  VSVGATGS--TANLNSEV----PSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLKKTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW
        VS  A  S  T  LN+E      S +H   + EI+D   F+    GIPI+VGL F SKSVLKK IY LA+ NSF L T RSN+TSF+I CKD+SC W
Subjt:  VSVGATGS--TANLNSEV----PSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLKKTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW

TrEMBL top hitse value%identityAlignment
A0A1S3C300 uncharacterized protein LOC1034958991.3e-3862.96Show/hide
Query:  RLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDSVSVGATGSTANLNSEVPSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLK
        +LT+YW D NNS LIRIV+DKDVSW MLVLSK PDN L VV+D+      G+T  ++SE+P ++ S  +  IIDL+AFES +  I I+VG MFR KSVLK
Subjt:  RLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDSVSVGATGSTANLNSEVPSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLK

Query:  KTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW
        K IY+LA+N+SF L+T+RSNRTSFDIRCKD SCPW
Subjt:  KTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW

A0A5A7TEC9 Protein FAR1-RELATED SEQUENCE 2-like1.7e-5962.83Show/hide
Query:  MALQRVTIVLDGIWIESSQYLDYRVVEVYVSLSSLLQGFLECIQGRLFPSSNLSISRLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDS
        MALQ+V  V  G WIES +Y+DYR+++VYV +SS  Q F  CIQ RLFP+S + +SRLT+YW D NNS LIRI +DKDVSW MLVLSKFPDNYL +VVD+
Subjt:  MALQRVTIVLDGIWIESSQYLDYRVVEVYVSLSSLLQGFLECIQGRLFPSSNLSISRLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDS

Query:  VSVGATGSTANLNSEVPSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLKKTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW
        V    TG+T  L+SE+P ++ S   T IIDL+AFES H  I I+VG MFR KSVLKK IY+LA+N+SF L+T+ SNRTSF+IRCKD +CPW
Subjt:  VSVGATGSTANLNSEVPSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLKKTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW

A0A5A7VAU3 MuDRA-like transposase3.4e-5559.69Show/hide
Query:  MALQRVTIVLDGIWIESSQYLDYRVVEVYVSLSSLLQGFLECIQGRLFPSSNLSISRLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDS
        MALQRV  V    WIES +Y+DYR+++VYV +SS  Q F  CIQ RLFP+S +S+SRLT+YW   NNS LI IV+DKDVSW MLVLSKFPDN L +VVD+
Subjt:  MALQRVTIVLDGIWIESSQYLDYRVVEVYVSLSSLLQGFLECIQGRLFPSSNLSISRLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDS

Query:  VSVGATGSTANLNSEVPSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLKKTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW
              G+T  ++S++P ++ S  +  IIDL+AFES +  I I+VG MFR KSVLKK IY+LA+N+SF L+T+RSNRTSF+IRCKD +CPW
Subjt:  VSVGATGSTANLNSEVPSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLKKTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW

A0A5A7VGR4 Protein FAR1-RELATED SEQUENCE 2-like1.8e-5660.73Show/hide
Query:  MALQRVTIVLDGIWIESSQYLDYRVVEVYVSLSSLLQGFLECIQGRLFPSSNLSISRLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDS
        MALQRV  V  G WIES +Y+DYR+++VYV +SS  Q F+ CIQ RLFP+S +SI  LT+YW D NNS LIRIV+DKDVSW MLVLSK PDN L +VVD+
Subjt:  MALQRVTIVLDGIWIESSQYLDYRVVEVYVSLSSLLQGFLECIQGRLFPSSNLSISRLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDS

Query:  VSVGATGSTANLNSEVPSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLKKTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW
              G+T  ++S++P ++ S     IIDL+AFES +  I I+VG MFR K+VLKK IY+LA+N+SF L+T+RSNRTSFDIRCKD SCPW
Subjt:  VSVGATGSTANLNSEVPSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLKKTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW

A0A5D3DAG3 ZnF_PMZ domain-containing protein2.7e-6063.87Show/hide
Query:  MALQRVTIVLDGIWIESSQYLDYRVVEVYVSLSSLLQGFLECIQGRLFPSSNLSISRLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDS
        MALQRV  V DG WIESS+Y+DY +++VYV +SS  Q F+ CIQ RLFP+  +S+SRLTVYW D NNSNLI+IV DKD SW MLV+SKF DN L +VVD+
Subjt:  MALQRVTIVLDGIWIESSQYLDYRVVEVYVSLSSLLQGFLECIQGRLFPSSNLSISRLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDS

Query:  VSVGATGSTANLNSEVPSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLKKTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW
        V     GST  L+SE+P ++ SH +  IIDL+AFES H GI I+VG MFR   VLKK IY+LA+NNSF L+T+RSNRTSFDIRCK  SCPW
Subjt:  VSVGATGSTANLNSEVPSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLKKTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPW

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTTACAACGAGTAACGATTGTTTTGGATGGTATATGGATTGAATCTTCCCAGTATCTCGATTATCGTGTTGTTGAGGTATATGTTTCACTTTCATCTTTGCTTCA
AGGATTTCTAGAATGTATTCAAGGTAGACTTTTTCCATCTTCAAATCTTTCCATTTCTCGTTTGACTGTTTATTGGGATGACTACAACAATTCCAACCTCATTCGGATTG
TTGAGGATAAGGATGTGTCTTGGCATATGTTAGTCTTGTCAAAGTTTCCTGATAATTATTTATTTGTGGTTGTTGACTCTGTATCGGTTGGTGCTACTGGAAGTACAGCG
AATTTGAACAGTGAAGTACCTAGCTCTCAACATTCACATCATGATACAGAAATTATTGACTTAGATGCTTTTGAATCGTTGCATGTTGGAATACCTATTAAAGTGGGATT
AATGTTTAGAAGCAAATCAGTACTGAAGAAAACTATTTATTTGCTTGCTGTGAACAATAGTTTTGGACTTATTACTATTAGGTCCAATCGTACCTCGTTTGATATTCGTT
GTAAGGATTTGTCTTGTCCTTGGATGGACAATCAACATGATGAAGTACGATTAAGAGAGGCACAACAAGGAGTTATTGCACGGATGATTAGTAGTATGAAAGCATTGACA
GATCGTTTGGATAGGTTGGAGATTGAAAATCGGGCAAGAGAAAGAATGTCACCTCCTCTAGGACAGCATGTGGTAATTAACCATAATGACAACCAATATGAGGGTGATGG
TTCTGATGGTTTAGACGATGACCAAGTTACATTACTTGGGGAGCCAAGACGTGTGGGACATGGAGTAGTTAGAGGAAGAGGTCTTGCACAAACCCACTGGAGCAGTGAAG
CTACCAAGCAAGTGATTGACATTTTTGTTGTAATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTTTACAACGAGTAACGATTGTTTTGGATGGTATATGGATTGAATCTTCCCAGTATCTCGATTATCGTGTTGTTGAGGTATATGTTTCACTTTCATCTTTGCTTCA
AGGATTTCTAGAATGTATTCAAGGTAGACTTTTTCCATCTTCAAATCTTTCCATTTCTCGTTTGACTGTTTATTGGGATGACTACAACAATTCCAACCTCATTCGGATTG
TTGAGGATAAGGATGTGTCTTGGCATATGTTAGTCTTGTCAAAGTTTCCTGATAATTATTTATTTGTGGTTGTTGACTCTGTATCGGTTGGTGCTACTGGAAGTACAGCG
AATTTGAACAGTGAAGTACCTAGCTCTCAACATTCACATCATGATACAGAAATTATTGACTTAGATGCTTTTGAATCGTTGCATGTTGGAATACCTATTAAAGTGGGATT
AATGTTTAGAAGCAAATCAGTACTGAAGAAAACTATTTATTTGCTTGCTGTGAACAATAGTTTTGGACTTATTACTATTAGGTCCAATCGTACCTCGTTTGATATTCGTT
GTAAGGATTTGTCTTGTCCTTGGATGGACAATCAACATGATGAAGTACGATTAAGAGAGGCACAACAAGGAGTTATTGCACGGATGATTAGTAGTATGAAAGCATTGACA
GATCGTTTGGATAGGTTGGAGATTGAAAATCGGGCAAGAGAAAGAATGTCACCTCCTCTAGGACAGCATGTGGTAATTAACCATAATGACAACCAATATGAGGGTGATGG
TTCTGATGGTTTAGACGATGACCAAGTTACATTACTTGGGGAGCCAAGACGTGTGGGACATGGAGTAGTTAGAGGAAGAGGTCTTGCACAAACCCACTGGAGCAGTGAAG
CTACCAAGCAAGTGATTGACATTTTTGTTGTAATGTAG
Protein sequenceShow/hide protein sequence
MALQRVTIVLDGIWIESSQYLDYRVVEVYVSLSSLLQGFLECIQGRLFPSSNLSISRLTVYWDDYNNSNLIRIVEDKDVSWHMLVLSKFPDNYLFVVVDSVSVGATGSTA
NLNSEVPSSQHSHHDTEIIDLDAFESLHVGIPIKVGLMFRSKSVLKKTIYLLAVNNSFGLITIRSNRTSFDIRCKDLSCPWMDNQHDEVRLREAQQGVIARMISSMKALT
DRLDRLEIENRARERMSPPLGQHVVINHNDNQYEGDGSDGLDDDQVTLLGEPRRVGHGVVRGRGLAQTHWSSEATKQVIDIFVVM