CuGenDBv2

Gene ID	PI0002074
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Rab5-interacting
Genome location	chr12:23678810..23681355
RNA-Seq Expression	PI0002074
Synteny	PI0002074
Gene Ontology terms	GO:0006996 - organelle organization (biological process) GO:0016021 - integral component of membrane (cellular component)
InterPro domains	IPR010742 - Rab5-interacting protein IPR029008 - Rab5-interacting protein family

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004145291.1 uncharacterized protein RAB5IF homolog [Cucumis sativus]

8.5e-63

96.06

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Query:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG
        MKDGKSMKVNSQLQ QNGHLPPFKL+KLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGG+WFILFLV+STTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASTTLFLLMWTLIYSLGHF
        VLLQEGLFAS TLFLLMWTLIYSLGHF
Subjt:  VLLQEGLFASTTLFLLMWTLIYSLGHF

XP_008457469.1 PREDICTED: uncharacterized protein C20orf24 homolog [Cucumis melo]

1.2e-64

96.06

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Query:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG
        MKDGK+MKVNSQLQHQNGHLPPFKL++LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLV+STTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASTTLFLLMWTLIYSLGHF
        VLLQEGLFAS TLFLLMWTLIYSLGHF
Subjt:  VLLQEGLFASTTLFLLMWTLIYSLGHF

XP_022948613.1 uncharacterized protein C20orf24 homolog [Cucurbita moschata]

2.9e-63

92.91

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Query:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQHQNGHLPPFKL+ LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFILFLV+STTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASTTLFLLMWTLIYSLGHF
        VLLQEGLFAS TLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASTTLFLLMWTLIYSLGHF

XP_022998338.1 uncharacterized protein C20orf24 homolog [Cucurbita maxima]

6.5e-63

92.13

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Query:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQHQNGHLPPFKL+ LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFI+FLV+STTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASTTLFLLMWTLIYSLGHF
        VLLQEGLFAS TLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASTTLFLLMWTLIYSLGHF

XP_038895585.1 respirasome Complex Assembly Factor 1-like isoform X2 [Benincasa hispida]

2.0e-64

96.06

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Query:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS KVNSQLQHQNGHLPPFKL+KLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLV+STTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASTTLFLLMWTLIYSLGHF
        VLLQEGLFAS TLFLLMWTLIYSLGHF
Subjt:  VLLQEGLFASTTLFLLMWTLIYSLGHF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LY22 Uncharacterized protein

4.1e-63

96.06

Show/hide

Query:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG
        MKDGKSMKVNSQLQ QNGHLPPFKL+KLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGG+WFILFLV+STTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASTTLFLLMWTLIYSLGHF
        VLLQEGLFAS TLFLLMWTLIYSLGHF
Subjt:  VLLQEGLFASTTLFLLMWTLIYSLGHF

A0A1S3C692 uncharacterized protein C20orf24 homolog

5.7e-65

96.06

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Query:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG
        MKDGK+MKVNSQLQHQNGHLPPFKL++LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLV+STTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASTTLFLLMWTLIYSLGHF
        VLLQEGLFAS TLFLLMWTLIYSLGHF
Subjt:  VLLQEGLFASTTLFLLMWTLIYSLGHF

A0A5A7VQ84 Rab5-interacting

8.8e-58

89.76

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Query:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG
        MKDGK+MKVNSQLQHQNGHLPPFKL++LFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLV+STTMIYGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASTTLFLLMWTLIYSLGHF
        VLLQEGLFAS TLFLL   L   L  F
Subjt:  VLLQEGLFASTTLFLLMWTLIYSLGHF

A0A6J1G9S8 uncharacterized protein C20orf24 homolog

1.4e-63

92.91

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Query:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQHQNGHLPPFKL+ LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFILFLV+STTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASTTLFLLMWTLIYSLGHF
        VLLQEGLFAS TLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASTTLFLLMWTLIYSLGHF

A0A6J1KGG2 uncharacterized protein C20orf24 homolog

3.1e-63

92.13

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Query:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG
        MKDGKS+KVNSQLQHQNGHLPPFKL+ LFDPE SWDKDQLGDVLHWMRQSVALVCGLLWGS+PLVGGIWFI+FLV+STTM+YGYYAMILKVDEEEFGGHG
Subjt:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHG

Query:  VLLQEGLFASTTLFLLMWTLIYSLGHF
        VLLQEGLFAS TLFLLMWTL+YSLGHF
Subjt:  VLLQEGLFASTTLFLLMWTLIYSLGHF

SwissProt top hits

e value

%identity

Alignment

Q9BUV8 Respirasome Complex Assembly Factor 1

5.2e-15

34.65

Show/hide

Query:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGH
        M  G+  +   Q Q  NG L     SK+   + +W DKD+  DV++W RQ +A+V G++WG +PL G +    F +++  ++Y Y++  L++DEEE+GG 
Subjt:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASTTLFLLMWTLIYSLGH
          L +EG   S  LF++     ++ GH
Subjt:  GVLLQEGLFASTTLFLLMWTLIYSLGH

Q9CQT9 Respirasome Complex Assembly Factor 1

1.9e-17

35.94

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Query:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGH
        M  G+  +   Q Q  NG L     SK+   + +W DKD+  DV++W RQ +ALV G++WG +PL G +    F +++  ++Y Y++  L++DEEE+GG 
Subjt:  MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSW-DKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGH

Query:  GVLLQEGLFASTTLFLLMWTLIYSLGHF
          L +EG   S  LF+++W + Y+  H+
Subjt:  GVLLQEGLFASTTLFLLMWTLIYSLGHF

Arabidopsis top hits

e value

%identity

Alignment

AT2G29020.1 Rab5-interacting family protein

5.3e-47

64.66

Show/hide

Query:  MKDGKSMKVNS------QLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEE
        MK+GKS K +S      Q+ HQN HL  F  +KLFD E SWDKDQLGDVLHW+RQ V L+CGLLWG+IPLVGGIW +LFL +S+ ++YGYYA++LK+DEE
Subjt:  MKDGKSMKVNS------QLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEE

Query:  EFGGHGVLLQEGLFASTTLFLLMWTLIYSLGHF
        +FGGH  LLQ+GLFAS +LFLL W L+YSL  F
Subjt:  EFGGHGVLLQEGLFASTTLFLLMWTLIYSLGHF

AT5G59410.1 Rab5-interacting family protein

1.8e-50

72.31

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Query:  MKDGKSMKVN---SQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFG
        MK+ KS K+N    Q  HQN HL P KL+KLFDP+ SWDKDQLGDVLHW+RQ V L+ GLLWGSIPLVGGIW ILFL +S+ ++YGYYAMILKVDEE+FG
Subjt:  MKDGKSMKVN---SQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFG

Query:  GHGVLLQEGLFASTTLFLLMWTLIYSLGHF
        GH  LLQEGLFAS TLFLL W L+YSL HF
Subjt:  GHGVLLQEGLFASTTLFLLMWTLIYSLGHF

Sequences

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CDS sequence

Show/hide CDS sequence

ATGAAGGACGGGAAATCTATGAAGGTCAATTCTCAGTTGCAGCATCAGAATGGTCACTTGCCGCCCTTCAAATTGTCTAAATTGTTCGATCCAGAGACTTCATGGGATAA
GGATCAACTAGGAGATGTGTTGCATTGGATGAGACAATCAGTTGCTCTTGTATGTGGGCTGCTTTGGGGTTCCATACCTCTGGTTGGAGGAATTTGGTTCATCTTATTCT
TGGTGGTATCAACCACGATGATATATGGATATTATGCAATGATATTGAAGGTAGATGAAGAAGAATTCGGCGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTTGCTTCC
ACAACTCTGTTTCTGCTTATGTGGACCCTCATTTATAGCTTGGGACATTTCTGA

mRNA sequence

Show/hide mRNA sequence

CGAGAATGGGGTTGTTGTCGACATGTCGAAATAGTGAATAAACAAAAGGCTGGCGGCGGCCATGCGATCAAAGCAGCAAAAAGTTCTTCAGGTTTTAGAGAGAGATTTTG
CTGACCCAATAATTTTCATTAAAAAAAGATAAAAAACACTACAATTTCCCACTTCAGATTGAATCCAAATCTCATGAATTTTTTTTTATAGAAATTTTGAAATGGAGAGA
GATCTACAGAAAGCCGTCTCCTGAATTTGTTTATTCGATTTCCCTCAATTTCATGCCGTTCTTGTTTTTTCCAAAACCCTAGTAATCAGTAGCATTTTCCATCTTCCCTC
TCCATATTCTTCACTGGGTATCTCGAATTTCCCCCCAATTTTTCGATTTCTGAGTAGTCAGCATGAAGGACGGGAAATCTATGAAGGTCAATTCTCAGTTGCAGCATCAG
AATGGTCACTTGCCGCCCTTCAAATTGTCTAAATTGTTCGATCCAGAGACTTCATGGGATAAGGATCAACTAGGAGATGTGTTGCATTGGATGAGACAATCAGTTGCTCT
TGTATGTGGGCTGCTTTGGGGTTCCATACCTCTGGTTGGAGGAATTTGGTTCATCTTATTCTTGGTGGTATCAACCACGATGATATATGGATATTATGCAATGATATTGA
AGGTAGATGAAGAAGAATTCGGCGGTCATGGAGTTCTCCTCCAGGAAGGGCTGTTTGCTTCCACAACTCTGTTTCTGCTTATGTGGACCCTCATTTATAGCTTGGGACAT
TTCTGATAATGGTTTTTTCATCGTTCTCGAAATCGGCCAAAGCATCGGTGGAGAGGTTGGTCGCCATTGTTGCTTGCTCTTTTATTAGTGAATGTGCAGTAGCTTGCTGT
TAAAGAGTGAAAACGCTTTTAGAAGTGGATTAATTTCATTAGGATTACAACTAACCAAAGTTTAGAAATTATTGACTCTGTTAAATCCAATCCAATCTTAAATTAATAAA
ATCTTTTTCACTGCATTCTTTTGTTAACCTAAAACATTGCTCACATTGCTCACTTGGTTTAGATGTATGTCATCAACTAAGAGATCAAAGGTTGGAGTCTCTCACCCTTA
CTCGTTGAACTAGAAAATTGATGTAGTTATTTCTTTTACGTTATACTACTTATTCAAAAAATTCAATGGATTGGTACAAGTTGATTTTCTGTTACGATAACTTGAGTGGC
TATAACAAAAAATTGAGAAAAATATTCCCTTCTAATTGACAATGGTTGTACAAGTTGGCTAGATGTGGA

Protein sequence

Show/hide protein sequence

MKDGKSMKVNSQLQHQNGHLPPFKLSKLFDPETSWDKDQLGDVLHWMRQSVALVCGLLWGSIPLVGGIWFILFLVVSTTMIYGYYAMILKVDEEEFGGHGVLLQEGLFAS
TTLFLLMWTLIYSLGHF

PI0002074 (gene) of Melon (PI 482460) v1 genome