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PI0002159 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002159
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase
Genome locationchr04:27612898..27613992
RNA-Seq ExpressionPI0002159
SyntenyPI0002159
Gene Ontology termsGO:0006278 - RNA-dependent DNA biosynthetic process (biological process)
GO:0006508 - proteolysis (biological process)
GO:0015074 - DNA integration (biological process)
GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0003676 - nucleic acid binding (molecular function)
GO:0003964 - RNA-directed DNA polymerase activity (molecular function)
GO:0004190 - aspartic-type endopeptidase activity (molecular function)
GO:0004519 - endonuclease activity (molecular function)
GO:0008270 - zinc ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037220.1 reverse transcriptase [Cucumis melo var. makuwa]9.7e-3871.07Show/hide
Query:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR
        +K S+RMKK A KKRRPLEF+AGD+VLIK R  Q  FRGR DQ LVR+YEGPVEVLKKVG  SYRVALPTWMK++P+IHVSNLKPYHQD  D + NVV+R
Subjt:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR

Query:  PNIGLNKREEDRDVEAILADR
        P I L+++ ED+DVE ILA+R
Subjt:  PNIGLNKREEDRDVEAILADR

KAA0052211.1 reverse transcriptase [Cucumis melo var. makuwa]7.4e-3870.73Show/hide
Query:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR
        +K S+RMKK A KKRRPLEF+AGD+VLIK R  Q  FRGR DQ LVR+YEGPVEVLKKVG  SYRVALPTWMK++P+IHVSNLKPYHQD  D + NVV+R
Subjt:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR

Query:  PNIGLNKREEDRDVEAILADRGG
        P I L+++ ED+DVE ILA+R G
Subjt:  PNIGLNKREEDRDVEAILADRGG

KAA0067557.1 reverse transcriptase [Cucumis melo var. makuwa]9.7e-3871.07Show/hide
Query:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR
        +K S+RMKK A KKRRPLEF+AGD+VLIK R  Q  FRGR DQ LVR+YEGPVEVLKKVG  SYRVALPTWMK++P+IHVSNLKPYHQD  D + NVV+R
Subjt:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR

Query:  PNIGLNKREEDRDVEAILADR
        P I L+++ ED+DVE ILA+R
Subjt:  PNIGLNKREEDRDVEAILADR

TYK19637.1 reverse transcriptase [Cucumis melo var. makuwa]9.7e-3871.07Show/hide
Query:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR
        +K S+RMKK A KKRRPLEF+AGD+VLIK R  Q  FRGR DQ LVR+YEGPVEVLKKVG  SYRVALPTWMK++P+IHVSNLKPYHQD  D + NVV+R
Subjt:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR

Query:  PNIGLNKREEDRDVEAILADR
        P I L+++ ED+DVE ILA+R
Subjt:  PNIGLNKREEDRDVEAILADR

TYK28713.1 reverse transcriptase [Cucumis melo var. makuwa]9.7e-3871.07Show/hide
Query:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR
        +K S+RMKK A KKRRPLEF+AGD+VLIK R  Q  FRGR DQ LVR+YEGPVEVLKKVG  SYRVALPTWMK++P+IHVSNLKPYHQD  D + NVV+R
Subjt:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR

Query:  PNIGLNKREEDRDVEAILADR
        P I L+++ ED+DVE ILA+R
Subjt:  PNIGLNKREEDRDVEAILADR

TrEMBL top hitse value%identityAlignment
A0A5A7T0E2 Reverse transcriptase4.7e-3871.07Show/hide
Query:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR
        +K S+RMKK A KKRRPLEF+AGD+VLIK R  Q  FRGR DQ LVR+YEGPVEVLKKVG  SYRVALPTWMK++P+IHVSNLKPYHQD  D + NVV+R
Subjt:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR

Query:  PNIGLNKREEDRDVEAILADR
        P I L+++ ED+DVE ILA+R
Subjt:  PNIGLNKREEDRDVEAILADR

A0A5A7UXR6 Reverse transcriptase4.7e-3871.07Show/hide
Query:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR
        +K S+RMKK A KKRRPLEF+AGD+VLIK R  Q  FRGR DQ LVR+YEGPVEVLKKVG  SYRVALPTWMK++P+IHVSNLKPYHQD  D + NVV+R
Subjt:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR

Query:  PNIGLNKREEDRDVEAILADR
        P I L+++ ED+DVE ILA+R
Subjt:  PNIGLNKREEDRDVEAILADR

A0A5D3BRZ6 Reverse transcriptase3.6e-3870.73Show/hide
Query:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR
        +K S+RMKK A KKRRPLEF+AGD+VLIK R  Q  FRGR DQ LVR+YEGPVEVLKKVG  SYRVALPTWMK++P+IHVSNLKPYHQD  D + NVV+R
Subjt:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR

Query:  PNIGLNKREEDRDVEAILADRGG
        P I L+++ ED+DVE ILA+R G
Subjt:  PNIGLNKREEDRDVEAILADRGG

A0A5D3C4R1 Reverse transcriptase4.7e-3871.07Show/hide
Query:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR
        +K S+RMKK A KKRRPLEF+AGD+VLIK R  Q  FRGR DQ LVR+YEGPVEVLKKVG  SYRVALPTWMK++P+IHVSNLKPYHQD  D + NVV+R
Subjt:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR

Query:  PNIGLNKREEDRDVEAILADR
        P I L+++ ED+DVE ILA+R
Subjt:  PNIGLNKREEDRDVEAILADR

A0A5D3DBE0 Reverse transcriptase4.7e-3871.07Show/hide
Query:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR
        +K S+RMKK A KKRRPLEF+AGD+VLIK R  Q  FRGR DQ LVR+YEGPVEVLKKVG  SYRVALPTWMK++P+IHVSNLKPYHQD  D + NVV+R
Subjt:  KKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVGKASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSR

Query:  PNIGLNKREEDRDVEAILADR
        P I L+++ ED+DVE ILA+R
Subjt:  PNIGLNKREEDRDVEAILADR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTCCGCCCTACAGCTGAGGGAGGGCCTTACTCGCGATGAACCGACCTTCATCACCCCTCCGCGAAAACCGCTGGGGATTCAGGAAAAAGTAACCTCGAAAGACGT
TCAGCGTGCCGTAGAGAAATATAACGATAAGGGGCTTGATAAGAAGACCTCCGAGCGGATGAAGAAGCGGGCAGGGAAGAAACGTCGCCCCCTCGAGTTTCAGGCGGGAG
ACCGAGTCCTCATCAAAAGGCGATTAGGACAAGGCTGGTTTCGAGGACGTACGGACCAACACCTCGTTAGGGAATACGAGGGCCCTGTTGAAGTCCTCAAGAAGGTGGGA
AAAGCATCCTACCGAGTGGCGTTGCCCACGTGGATGAAAATGCATCCAATAATTCACGTGAGTAACTTAAAGCCCTACCACCAAGACCCCGGTGACACCCGATGCAACGT
TGTCAGCCGGCCAAACATCGGTCTGAACAAAAGGGAAGAAGACCGAGATGTTGAAGCGATCCTTGCCGACCGGGGCGGTGTTTGCCTGTGGCCGCATGTTCGAACACCTT
CACCCCACCTTGAGTTATGTTTTTCCTTTAGTTTCCATGTCACTTTGCTTTTACTTTCCGTGTCGCTTTATGCTTTCATTTACTTTCCGTGTCGCATTGCTTTTACCTTC
TATGTCGCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGATTTCCGCCCTACAGCTGAGGGAGGGCCTTACTCGCGATGAACCGACCTTCATCACCCCTCCGCGAAAACCGCTGGGGATTCAGGAAAAAGTAACCTCGAAAGACGT
TCAGCGTGCCGTAGAGAAATATAACGATAAGGGGCTTGATAAGAAGACCTCCGAGCGGATGAAGAAGCGGGCAGGGAAGAAACGTCGCCCCCTCGAGTTTCAGGCGGGAG
ACCGAGTCCTCATCAAAAGGCGATTAGGACAAGGCTGGTTTCGAGGACGTACGGACCAACACCTCGTTAGGGAATACGAGGGCCCTGTTGAAGTCCTCAAGAAGGTGGGA
AAAGCATCCTACCGAGTGGCGTTGCCCACGTGGATGAAAATGCATCCAATAATTCACGTGAGTAACTTAAAGCCCTACCACCAAGACCCCGGTGACACCCGATGCAACGT
TGTCAGCCGGCCAAACATCGGTCTGAACAAAAGGGAAGAAGACCGAGATGTTGAAGCGATCCTTGCCGACCGGGGCGGTGTTTGCCTGTGGCCGCATGTTCGAACACCTT
CACCCCACCTTGAGTTATGTTTTTCCTTTAGTTTCCATGTCACTTTGCTTTTACTTTCCGTGTCGCTTTATGCTTTCATTTACTTTCCGTGTCGCATTGCTTTTACCTTC
TATGTCGCTTAG
Protein sequenceShow/hide protein sequence
MISALQLREGLTRDEPTFITPPRKPLGIQEKVTSKDVQRAVEKYNDKGLDKKTSERMKKRAGKKRRPLEFQAGDRVLIKRRLGQGWFRGRTDQHLVREYEGPVEVLKKVG
KASYRVALPTWMKMHPIIHVSNLKPYHQDPGDTRCNVVSRPNIGLNKREEDRDVEAILADRGGVCLWPHVRTPSPHLELCFSFSFHVTLLLLSVSLYAFIYFPCRIAFTF
YVA