CuGenDBv2

Gene ID	PI0002169
Organism	Cucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Description	Zinc finger BED domain-containing protein RICESLEEPER 3-like
Genome location	chr07:17470753..17474447
RNA-Seq Expression	PI0002169
Synteny	PI0002169
Gene Ontology terms	GO:0009228 - thiamine biosynthetic process (biological process) GO:0009791 - post-embryonic development (biological process) GO:0016310 - phosphorylation (biological process) GO:0005634 - nucleus (cellular component) GO:0003677 - DNA binding (molecular function) GO:0008972 - phosphomethylpyrimidine kinase activity (molecular function) GO:0046872 - metal ion binding (molecular function) GO:0046983 - protein dimerization activity (molecular function)
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0035954.1 thiamine biosynthetic bifunctional enzyme TH1 [Cucumis melo var. makuwa]

9.6e-18

85.94

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Query:  MEQCCRRLFHEYSCTRSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE
        +EQCCRRLFHEYS TRSGS  GCS  STTSTQTV SGLDANIDFD NE VGEDFVYDTIVEEFE
Subjt:  MEQCCRRLFHEYSCTRSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE

KAA0038019.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]

9.6e-18

85.94

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Query:  MEQCCRRLFHEYSCTRSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE
        +EQCCRRLFHEYS TRSGS  GCS  STTSTQTV SGLDANIDFD NE VGEDFVYDTIVEEFE
Subjt:  MEQCCRRLFHEYSCTRSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE

KAA0057608.1 transposase [Cucumis melo var. makuwa]

9.6e-18

85.94

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Query:  MEQCCRRLFHEYSCTRSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE
        +EQCCRRLFHEYS TRSGS  GCS  STTSTQTV SGLDANIDFD NE VGEDFVYDTIVEEFE
Subjt:  MEQCCRRLFHEYSCTRSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE

KAA0057700.1 zinc finger BED domain-containing protein RICESLEEPER 3-like [Cucumis melo var. makuwa]

9.6e-18

85.94

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Query:  MEQCCRRLFHEYSCTRSGSGPGCSST--TSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE
        +EQCCRRLFHEYS TRSGS  GCSST  TSTQTV SGLDANIDFD NE VGEDFVYDTIVEEFE
Subjt:  MEQCCRRLFHEYSCTRSGSGPGCSST--TSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE

TYK28895.1 putative transposase [Cucumis melo var. makuwa]

9.6e-18

85.94

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Query:  MEQCCRRLFHEYSCTRSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE
        +EQCCRRLFHEYS TRSGS  GCS  STTSTQTV SGLDANIDFD NE VGEDFVYDTIVEEFE
Subjt:  MEQCCRRLFHEYSCTRSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE

TrEMBL top hits

e value

%identity

Alignment

A0A5A7SX87 Thiamine biosynthetic bifunctional enzyme TH1

4.6e-18

85.94

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Query:  MEQCCRRLFHEYSCTRSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE
        +EQCCRRLFHEYS TRSGS  GCS  STTSTQTV SGLDANIDFD NE VGEDFVYDTIVEEFE
Subjt:  MEQCCRRLFHEYSCTRSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE

A0A5A7URG0 Zinc finger BED domain-containing protein RICESLEEPER 3-like

4.6e-18

85.94

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Query:  MEQCCRRLFHEYSCTRSGSGPGCSST--TSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE
        +EQCCRRLFHEYS TRSGS  GCSST  TSTQTV SGLDANIDFD NE VGEDFVYDTIVEEFE
Subjt:  MEQCCRRLFHEYSCTRSGSGPGCSST--TSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE

A0A5D3CR68 Zinc finger BED domain-containing protein RICESLEEPER 3-like

4.6e-18

85.94

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Query:  MEQCCRRLFHEYSCTRSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE
        +EQCCRRLFHEYS TRSGS  GCS  STTSTQTV SGLDANIDFD NE VGEDFVYDTIVEEFE
Subjt:  MEQCCRRLFHEYSCTRSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE

A0A5D3CXI1 Zinc finger BED domain-containing protein RICESLEEPER 3-like

4.6e-18

85.94

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Query:  MEQCCRRLFHEYSCTRSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE
        +EQCCRRLFHEYS TRSGS  GCS  STTSTQTV SGLDANIDFD NE VGEDFVYDTIVEEFE
Subjt:  MEQCCRRLFHEYSCTRSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE

A0A5D3DAN8 Zinc finger BED domain-containing protein RICESLEEPER 3-like

4.6e-18

85.94

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Query:  MEQCCRRLFHEYSCTRSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE
        +EQCCRRLFHEYS TRSGS  GCS  STTSTQTV SGLDANIDFD NE VGEDFVYDTIVEEFE
Subjt:  MEQCCRRLFHEYSCTRSGSGPGCS--STTSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFE

SwissProt top hits	e value	%identity	Alignment
No hits found

Arabidopsis top hits	e value	%identity	Alignment
No hits found

Sequences

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CDS sequence

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ATGGATTCAACGGATGTGGAGTTTGACGGAAGTGAAACTTCAAAACTTGTACGAGACGAAGATATAGATGTCAATACAAATGACCAAACCCAAATGGAACAATGTTGTAG
ACGTCTCTTTCATGAGTATAGTTGTACTCGAAGTGGTAGTGGACCAGGATGTAGTAGTACTACTAGTACACAAACTGTCTCATCAGGCTTGGATGCAAATATTGATTTTG
ATCCAAATGAAAAGGTGGGTGAAGATTTTGTCTATGACACGATTGTTGAGGAATTTGAAGGATTCCGGGTGGTTATGGATAATGAAAAGGAGCTTGAAGATGTAACGCCG
CAAATTTGGGAAATTTTGGAGATAATAATAAAAGGAAATCTGGAAATTAGGGGAGAAGGTCAAGAGACCCCCCCCATTTCCCCTCTTCTTCTTCGCGCCGCCACACCCCT
CCTCACCATTTTCTTTTTCTTTCTTCCTCCCAACCCAGCCACCGCCGGCCCTCCACGCCGCCCAACCCGCCGCGCCGCCAGCTCCACGCTGCCGCCGTCTGCGTCGTCTA
GTCCGCGTGAAGCCCTTTTCGCGCCGCTAGCCACTATTTTTCGCGCCGTTCGTCCTGTCGCCGGTCAGATCTGTGCCGCTCTCACCTTTCCAGCCATTTTCTCTACTTTT
TGGGTGTCGTTGCTTTTCTCGCCTCGCGCTCGTTTTGGGTCATTTGGATTTGGGCGTTTTGGAGCCCAAATTCCATTTTCGAACTTTTGGGATTCTCCTTGGCTCGTTGA
TACCTTCCGGTTAGCTCGATTAAGGCATGTAGTTCTACTGGACGACTCAGGTGCATCCTCCGGGATCACTAGACTGATTAGGCAAAGGTATTTCGAGAGGCAGATCGACG
AGGGGCAGGAAGGATATGTGATGGTCATGGGCGTCGTCGTCGCTTCCGCCGTTTTGGTTATGTCTTTTGTGTCCATTTTGGGATTTCTATGTTATGTTTAA

mRNA sequence

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Protein sequence

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MDSTDVEFDGSETSKLVRDEDIDVNTNDQTQMEQCCRRLFHEYSCTRSGSGPGCSSTTSTQTVSSGLDANIDFDPNEKVGEDFVYDTIVEEFEGFRVVMDNEKELEDVTP
QIWEILEIIIKGNLEIRGEGQETPPISPLLLRAATPLLTIFFFFLPPNPATAGPPRRPTRRAASSTLPPSASSSPREALFAPLATIFRAVRPVAGQICAALTFPAIFSTF
WVSLLFSPRARFGSFGFGRFGAQIPFSNFWDSPWLVDTFRLARLRHVVLLDDSGASSGITRLIRQRYFERQIDEGQEGYVMVMGVVVASAVLVMSFVSILGFLCYV

PI0002169 (gene) of Melon (PI 482460) v1 genome