; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0002225 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002225
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionexosome complex component RRP41-like
Genome locationchr11:5685167..5688762
RNA-Seq ExpressionPI0002225
SyntenyPI0002225
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0071051 - polyadenylation-dependent snoRNA 3'-end processing (biological process)
GO:0071028 - nuclear mRNA surveillance (biological process)
GO:0009845 - seed germination (biological process)
GO:0016075 - rRNA catabolic process (biological process)
GO:0034475 - U4 snRNA 3'-end processing (biological process)
GO:0034427 - nuclear-transcribed mRNA catabolic process, exonucleolytic, 3'-5' (biological process)
GO:0000177 - cytoplasmic exosome (RNase complex) (cellular component)
GO:0005730 - nucleolus (cellular component)
GO:0000176 - nuclear exosome (RNase complex) (cellular component)
GO:0016740 - transferase activity (molecular function)
GO:0008408 - 3'-5' exonuclease activity (molecular function)
InterPro domainsIPR001247 - Exoribonuclease, phosphorolytic domain 1
IPR015847 - Exoribonuclease, phosphorolytic domain 2
IPR020568 - Ribosomal protein S5 domain 2-type fold
IPR027408 - PNPase/RNase PH domain superfamily
IPR036345 - Exoribonuclease, PH domain 2 superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6570792.1 Exosome complex component RRP41-like protein, partial [Cucurbita argyrosperma subsp. sororia]2.4e-13394.57Show/hide
Query:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MAKKAT  T+TYSPSPT HKTRPP+FR+DDV+WVRPD R FHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
Subjt:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS
        FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDP LEEENYQDGS
Subjt:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE
        LMITCMPSRYEVTQLTITGEW+T+KINEGMQLCLDASCKLV IMRSCLKESAAT+SEE
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE

XP_004145749.1 exosome complex component RRP41-like [Cucumis sativus]2.0e-13596.51Show/hide
Query:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MAKKAT TTTTYSPSPTVHKTRP LFRTDDVNWVRPD RGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
Subjt:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS
        FSTPVRGQGSENK+FSSMLHK+LEGAIILE+FPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLID +LEEENYQDGS
Subjt:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE
        LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESA TISEE
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE

XP_008463959.1 PREDICTED: exosome complex component RRP41-like [Cucumis melo]1.6e-13798.46Show/hide
Query:  MAKKAT-STTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYT
        MAKKAT +TTTTYSPSPTVHKTRPPLFRTDDVNWVRPD RGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYT
Subjt:  MAKKAT-STTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYT

Query:  TFSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDG
        TFSTPVRGQGSENKEFSSMLHK+LEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDG
Subjt:  TFSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDG

Query:  SLMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE
        SLMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE
Subjt:  SLMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE

XP_022986160.1 exosome complex component RRP41-like [Cucurbita maxima]2.4e-13394.57Show/hide
Query:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MAKKAT  T+TYSPSPT HKTRPP+FR+DDV+WVRPD R FHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
Subjt:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS
        FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDP LEEENYQDGS
Subjt:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE
        LMITCMPSRYEVTQLTITGEW+T+KINEGMQLCLDASCKLV IMRSCLKESAAT+SEE
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE

XP_038900607.1 exosome complex component RRP41-like isoform X1 [Benincasa hispida]1.1e-13395.35Show/hide
Query:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MAKKAT TTTTYSPSPT+ KTRPP+FRT DV+WVR D RGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
Subjt:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS
        FSTPVRGQGSENKEFSSMLHKALEGAI+LETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDP LEEENYQDGS
Subjt:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE
        LMITCMPSRYEVTQLTITGEW+T+KINEGMQLCLDASCKLVEIMRSCLKESAATISEE
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE

TrEMBL top hitse value%identityAlignment
A0A0A0KEK6 Uncharacterized protein9.6e-13696.51Show/hide
Query:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MAKKAT TTTTYSPSPTVHKTRP LFRTDDVNWVRPD RGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
Subjt:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS
        FSTPVRGQGSENK+FSSMLHK+LEGAIILE+FPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLID +LEEENYQDGS
Subjt:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE
        LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESA TISEE
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE

A0A1S3CKF3 exosome complex component RRP41-like7.9e-13898.46Show/hide
Query:  MAKKAT-STTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYT
        MAKKAT +TTTTYSPSPTVHKTRPPLFRTDDVNWVRPD RGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYT
Subjt:  MAKKAT-STTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYT

Query:  TFSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDG
        TFSTPVRGQGSENKEFSSMLHK+LEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDG
Subjt:  TFSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDG

Query:  SLMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE
        SLMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE
Subjt:  SLMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE

A0A6J1CHT0 exosome complex component RRP41-like6.5e-13293.02Show/hide
Query:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MAKKAT  TTTYSPSPT+HKTRPP+FR+D+ +WVRPD RGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
Subjt:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS
        F+TPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVD+FALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDP+LEEENYQDGS
Subjt:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE
        LMITCMPSRYEVTQLTITGEW+T+KINEGMQLCLDASCKLV+IMRSCLKES ATIS++
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE

A0A6J1FYV1 exosome complex component RRP41-like1.2e-13394.57Show/hide
Query:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MAKKAT  TTTYSPSPT HKTRPP+FR+DDV+WVRPD R FHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
Subjt:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS
        FSTPVRGQGSENKEFSSMLHKALEGAII ETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDP LEEENYQDGS
Subjt:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE
        LMITCMPSRYEVTQLTITGEW+T+KINEGMQLCLDASCKLV IMRSCLKESAAT+SEE
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE

A0A6J1JDA9 exosome complex component RRP41-like1.2e-13394.57Show/hide
Query:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MAKKAT  T+TYSPSPT HKTRPP+FR+DDV+WVRPD R FHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
Subjt:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS
        FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDP LEEENYQDGS
Subjt:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE
        LMITCMPSRYEVTQLTITGEW+T+KINEGMQLCLDASCKLV IMRSCLKESAAT+SEE
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE

SwissProt top hitse value%identityAlignment
A2RVK7 Exosome complex component RRP41-like8.5e-10573.15Show/hide
Query:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MA K  + T TYSP   V ++R P+F+  D++W RPD RGFHQCRPA  +TGAV++ASGSAYAEFGNTKVIVSVFGPRESKKAM+YSD+GRLNC+VSYT 
Subjt:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS
        F++P  GQG+++KE+SSMLHKALEG I++ETFPKTTVDVFALVLESGGSDL V+ISCASLALADAGIM+YDL+ +VSVSC GK+L+IDP+ EEE  +DGS
Subjt:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISE
         M+TCMPSRYE+TQLTITGEWTT  INE MQLCLDAS KL EIMR CLK+SA+   E
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISE

B6YSI2 Exosome complex component Rrp416.4e-2833.2Show/hide
Query:  RPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMMYSDIGRLNCSVSYTTFSTPVR---GQGSENKEFSS
        +P   +  D N  R D R  ++ RP     G +  A GSAY E+G  K++ +V+GPRE   K +   D   L    +   FS   R   G    + E S 
Subjt:  RPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMMYSDIGRLNCSVSYTTFSTPVR---GQGSENKEFSS

Query:  MLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGSLMITCMPSRYEVTQLTI
        ++  ALE A+ILE FP+T +D+F  VL++        I+ ASLALADAGI + DLVA+ +       +++D   EE+NY +  + +  MP + ++T L +
Subjt:  MLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGSLMITCMPSRYEVTQLTI

Query:  TGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE
         G  T  +  E ++L +  +  + +  R  LKE    I+EE
Subjt:  TGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE

O59223 Exosome complex component Rrp413.8e-2833.61Show/hide
Query:  RPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMMYSDIGRLNCSVSYTTFSTPVR---GQGSENKEFSS
        +P   +  D N  R D R  ++ RP   + G +  A+GSAY E+G  K+I +V+GPRE   K +   D   L    +   FS   R   G    + E S 
Subjt:  RPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMMYSDIGRLNCSVSYTTFSTPVR---GQGSENKEFSS

Query:  MLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGSLMITCMPSRYEVTQLTI
        ++  ALE A+ILE FP+T++DVF  VL++        I+ ASLALADAGI + DLVA+ +       +++D   EE+NY +  + +  MP + ++T L +
Subjt:  MLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGSLMITCMPSRYEVTQLTI

Query:  TGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE
         G  T  +  E ++L +  +  + +  R  LKE    I++E
Subjt:  TGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE

Q6P0I8 Exosome complex component MTR32.8e-3137.17Show/hide
Query:  RPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRES-KKAMMYSDIGRLNCSVSYTTFSTPVRG---QGSENKEFSSMLHKALEGAIILE
        R   RG    RP F R G V+ A GSAY E GNTK+I SV+GP+E+ ++       GRL C      FS   RG   QGSE ++ S+ L ++L   + L 
Subjt:  RPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRES-KKAMMYSDIGRLNCSVSYTTFSTPVRG---QGSENKEFSSMLHKALEGAIILE

Query:  TFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEE------ENYQD--GSLMITCMPSRYEVTQLTITGEWT
         +P++ +DV  +VLE+ GS L   ++CAS+ALADAGI +YD+V   ++   G   L+DP   E      E Y D  G + +  +P+  +V+ L   GE  
Subjt:  TFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEE------ENYQD--GSLMITCMPSRYEVTQLTITGEWT

Query:  TSKINEGMQLCLDASCKLVEIMRSCL
           + E M+ C+D   KL  +++  L
Subjt:  TSKINEGMQLCLDASCKLVEIMRSCL

Q8U0L9 Exosome complex component Rrp412.2e-2834.02Show/hide
Query:  RPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMMYSDIGRLNCSVSYTTFSTPVR---GQGSENKEFSS
        +P   +  D N  R D R  ++ RP   + G +  A+GSAY E+G  K+I +V+GPRE   K +   D   L    +   FS   R   G    + E S 
Subjt:  RPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE-SKKAMMYSDIGRLNCSVSYTTFSTPVR---GQGSENKEFSS

Query:  MLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGSLMITCMPSRYEVTQLTI
        ++  ALE A+ILE FP+T +DVF  VL++        I+ ASLALADAGI + DLVA+ S       +++D   EE+NY +  + +  MP + ++T L +
Subjt:  MLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGSLMITCMPSRYEVTQLTI

Query:  TGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE
         G  T  +  E ++L +  +  + +  R  LKE    I++E
Subjt:  TGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE

Arabidopsis top hitse value%identityAlignment
AT3G46210.1 Ribosomal protein S5 domain 2-like superfamily protein4.3e-1130.67Show/hide
Query:  RPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTTFSTPVRGQ-GSENKEFSSMLHKALEGAIILETFP
        R D R  +Q RP       ++   GSA    G+TKV+ +V+GP+   K    ++         +     P  GQ G   KE+  +L + ++   +L   P
Subjt:  RPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTTFSTPVRGQ-GSENKEFSSMLHKALEGAIILETFP

Query:  KTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKN--LLIDPILEEE
         TT  V   V+   GS LP  I+ A  AL DAGI +  L  ++   C  +N  L++DP   EE
Subjt:  KTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKN--LLIDPILEEE

AT3G46210.2 Ribosomal protein S5 domain 2-like superfamily protein4.3e-1130.67Show/hide
Query:  RPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTTFSTPVRGQ-GSENKEFSSMLHKALEGAIILETFP
        R D R  +Q RP       ++   GSA    G+TKV+ +V+GP+   K    ++         +     P  GQ G   KE+  +L + ++   +L   P
Subjt:  RPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTTFSTPVRGQ-GSENKEFSSMLHKALEGAIILETFP

Query:  KTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKN--LLIDPILEEE
         TT  V   V+   GS LP  I+ A  AL DAGI +  L  ++   C  +N  L++DP   EE
Subjt:  KTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKN--LLIDPILEEE

AT3G61620.1 3'-5'-exoribonuclease family protein1.7e-2030.04Show/hide
Query:  VRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE--SKKAMMYSDIGRLNCSVSYTTFSTPVRGQ---GSENKEFSSMLHKALEGAII
        +R D R F++ R      G V+ A GSA  E GNTKVI +V+GPRE  +K     +D   + C  S   FST  R +      + E S ++ + +E  I+
Subjt:  VRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE--SKKAMMYSDIGRLNCSVSYTTFSTPVRGQ---GSENKEFSSMLHKALEGAII

Query:  LETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGSLMITCMPSRYEVTQLTITGEWTTSKINE
         E  P + +D+F  VL++ G      I+ A+LALADAGI + DL  S S        L+D    E++     + +  +P   +V+ L +  +        
Subjt:  LETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGSLMITCMPSRYEVTQLTITGEWTTSKINE

Query:  GMQLCLDASCKLVEIMRSCLKES
           L  +    + E +R  L+E+
Subjt:  GMQLCLDASCKLVEIMRSCLKES

AT3G61620.2 3'-5'-exoribonuclease family protein1.7e-2030.04Show/hide
Query:  VRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE--SKKAMMYSDIGRLNCSVSYTTFSTPVRGQ---GSENKEFSSMLHKALEGAII
        +R D R F++ R      G V+ A GSA  E GNTKVI +V+GPRE  +K     +D   + C  S   FST  R +      + E S ++ + +E  I+
Subjt:  VRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRE--SKKAMMYSDIGRLNCSVSYTTFSTPVRGQ---GSENKEFSSMLHKALEGAII

Query:  LETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGSLMITCMPSRYEVTQLTITGEWTTSKINE
         E  P + +D+F  VL++ G      I+ A+LALADAGI + DL  S S        L+D    E++     + +  +P   +V+ L +  +        
Subjt:  LETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGSLMITCMPSRYEVTQLTITGEWTTSKINE

Query:  GMQLCLDASCKLVEIMRSCLKES
           L  +    + E +R  L+E+
Subjt:  GMQLCLDASCKLVEIMRSCLKES

AT4G27490.1 3'-5'-exoribonuclease family protein6.0e-10673.15Show/hide
Query:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT
        MA K  + T TYSP   V ++R P+F+  D++W RPD RGFHQCRPA  +TGAV++ASGSAYAEFGNTKVIVSVFGPRESKKAM+YSD+GRLNC+VSYT 
Subjt:  MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTT

Query:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS
        F++P  GQG+++KE+SSMLHKALEG I++ETFPKTTVDVFALVLESGGSDL V+ISCASLALADAGIM+YDL+ +VSVSC GK+L+IDP+ EEE  +DGS
Subjt:  FSTPVRGQGSENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGS

Query:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISE
         M+TCMPSRYE+TQLTITGEWTT  INE MQLCLDAS KL EIMR CLK+SA+   E
Subjt:  LMITCMPSRYEVTQLTITGEWTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAAAAAAGCGACTTCAACTACCACAACGTATTCTCCGTCTCCTACTGTCCACAAAACCAGGCCACCCCTCTTCAGAACCGACGACGTCAACTGGGTTCGCCCCGA
TGCCCGTGGCTTCCACCAATGCCGGCCTGCTTTTTTCAGGACTGGAGCTGTAAATGCTGCTTCAGGATCTGCTTATGCAGAATTCGGTAATACCAAGGTCATTGTTTCTG
TATTTGGTCCTAGAGAAAGTAAGAAAGCAATGATGTACAGTGATATTGGCCGGCTCAATTGTAGTGTTAGTTATACAACATTTTCCACTCCAGTTCGTGGACAGGGATCG
GAAAACAAGGAGTTCTCCTCCATGTTACATAAAGCTTTGGAAGGGGCAATAATATTGGAAACATTCCCCAAAACAACAGTGGACGTATTTGCCTTGGTGTTGGAATCTGG
AGGCAGTGATCTTCCTGTTGTAATATCATGTGCCAGTCTTGCTCTTGCTGATGCTGGAATTATGCTTTATGATCTTGTTGCCTCAGTTTCTGTGAGCTGCTTTGGCAAGA
ATCTTCTTATTGATCCTATATTGGAAGAAGAAAACTACCAAGATGGAAGTCTTATGATAACTTGTATGCCATCTCGTTACGAAGTCACTCAGCTCACAATTACAGGCGAA
TGGACAACTTCTAAAATTAATGAGGGTATGCAACTTTGCCTTGATGCTTCATGTAAGCTTGTGGAGATCATGAGATCATGCTTGAAGGAATCTGCCGCCACCATTTCAGA
GGAATAA
mRNA sequenceShow/hide mRNA sequence
CTGGTCTGGCGCCCTCACCCGCTTCCAAGGTTCAATTTCCCAATCGTTGGCTCCTCGGTCTCTACCAAAACACACAGATTCTTTTCAATCTCTTCGAAGTCTTAACAGGC
CATTCTTTAAACCGATCGATTCTGAGTCTTTGTGTTCATTACCTTGACGGCCTCAGGAAATTTGTGGCTGAGCCTTCTAACTTGTCAACGGAGTCATTCATTGGCGTTCT
GAATGGCCAAAAAAGCGACTTCAACTACCACAACGTATTCTCCGTCTCCTACTGTCCACAAAACCAGGCCACCCCTCTTCAGAACCGACGACGTCAACTGGGTTCGCCCC
GATGCCCGTGGCTTCCACCAATGCCGGCCTGCTTTTTTCAGGACTGGAGCTGTAAATGCTGCTTCAGGATCTGCTTATGCAGAATTCGGTAATACCAAGGTCATTGTTTC
TGTATTTGGTCCTAGAGAAAGTAAGAAAGCAATGATGTACAGTGATATTGGCCGGCTCAATTGTAGTGTTAGTTATACAACATTTTCCACTCCAGTTCGTGGACAGGGAT
CGGAAAACAAGGAGTTCTCCTCCATGTTACATAAAGCTTTGGAAGGGGCAATAATATTGGAAACATTCCCCAAAACAACAGTGGACGTATTTGCCTTGGTGTTGGAATCT
GGAGGCAGTGATCTTCCTGTTGTAATATCATGTGCCAGTCTTGCTCTTGCTGATGCTGGAATTATGCTTTATGATCTTGTTGCCTCAGTTTCTGTGAGCTGCTTTGGCAA
GAATCTTCTTATTGATCCTATATTGGAAGAAGAAAACTACCAAGATGGAAGTCTTATGATAACTTGTATGCCATCTCGTTACGAAGTCACTCAGCTCACAATTACAGGCG
AATGGACAACTTCTAAAATTAATGAGGGTATGCAACTTTGCCTTGATGCTTCATGTAAGCTTGTGGAGATCATGAGATCATGCTTGAAGGAATCTGCCGCCACCATTTCA
GAGGAATAAAAAGAGTAATGTCTAATGTTATCTCTTTTTAGTTTTAGTAGAGAAATCTCAACACCCCTTCCCCTTCCATTCCAATTTTGATGAGAATGAAAAATATGTAA
AATATTTGGAAAATGGTTGATTTGGATTTTGCATCAAAGTAAAAAGTAGCAGAGAAGTTTTCATTTGGTTGGTAGCTGACCACAGTAAAAGACAATTGCAGTGGCTGAAG
AAGCAAAGTTGACTTGAAACCTCTTTTTTTTTTCTTTTATTTTTTTTTTGGATTTTTAGTGTTGGTAAGTCAAGTCAAAGCCTTATCCTCCTACTTCTACGGTTCTACCA
CGCTCCATTTTGAAGTCTATTCTCTAGTCAAAGTCAATTTTCATTCTTTGTATTTTTTTTTTTTAAATGTTTAGTTATGATCCTTTTAAGTTAACATGGATATGATAGAG
GCAACAAAGCCATTGACTATAC
Protein sequenceShow/hide protein sequence
MAKKATSTTTTYSPSPTVHKTRPPLFRTDDVNWVRPDARGFHQCRPAFFRTGAVNAASGSAYAEFGNTKVIVSVFGPRESKKAMMYSDIGRLNCSVSYTTFSTPVRGQGS
ENKEFSSMLHKALEGAIILETFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMLYDLVASVSVSCFGKNLLIDPILEEENYQDGSLMITCMPSRYEVTQLTITGE
WTTSKINEGMQLCLDASCKLVEIMRSCLKESAATISEE