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PI0002254 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002254
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionleucine-rich repeat extensin-like protein 2
Genome locationchr10:4371685..4372166
RNA-Seq ExpressionPI0002254
SyntenyPI0002254
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0054146.1 AUX/IAA protein [Cucumis melo var. makuwa]8.3e-6082.07Show/hide
Query:  MLKATKKKLKGLWSKMKKKNKKKNPNKTQTSSYQYCCTCHFSSSSTHQHQPSAPPLPPWLNDDPTFLAPSTQSQSDHPDRADEMVEPLVANQWSYQQYLV
        MLKATKKKLKGLWSKM    KKK PNKTQT+ YQYCC+CH SSSS   HQPSAPPLPPWLN+DPTFL P TQSQ +HPDRAD M    V NQWSYQQYLV
Subjt:  MLKATKKKLKGLWSKMKKKNKKKNPNKTQTSSYQYCCTCHFSSSSTHQHQPSAPPLPPWLNDDPTFLAPSTQSQSDHPDRADEMVEPLVANQWSYQQYLV

Query:  AEPVYGVPVIVETESRRDQKWKRLIKLFDCFFPCFGITQQLYYIP
        AEPVYGVP+IV+TESRRDQKWKRLIKLFDCF PCFGITQQLYYIP
Subjt:  AEPVYGVPVIVETESRRDQKWKRLIKLFDCFFPCFGITQQLYYIP

KAG6601672.1 hypothetical protein SDJN03_06905, partial [Cucurbita argyrosperma subsp. sororia]3.9e-1747.3Show/hide
Query:  MLKATKKKLKGLWSKMKKKNKKKNPNKTQTSSYQ--YCCTCHFSSSSTHQHQPSAPPLPPWLNDDPTFLAPSTQSQSDHPDRADEMVEPLVANQWSYQQY
        MLKA KKKLK  WS+ KK+ K  +PN          +CCTCH SS+     QPSAPPLPPWL DD  F  P      +HP+ A E+  PLVA    YQQY
Subjt:  MLKATKKKLKGLWSKMKKKNKKKNPNKTQTSSYQ--YCCTCHFSSSSTHQHQPSAPPLPPWLNDDPTFLAPSTQSQSDHPDRADEMVEPLVANQWSYQQY

Query:  LVAEPVYGVPVIVETESRRDQKWKRL-----------IKLFDCFFPCF
        +  +PVYGVP+IV+T+SRRD    R            I++  CF PCF
Subjt:  LVAEPVYGVPVIVETESRRDQKWKRL-----------IKLFDCFFPCF

KGN49708.1 hypothetical protein Csa_018344 [Cucumis sativus]5.1e-6582.58Show/hide
Query:  KFKKPNIMLKATKKKLKGLWSKMKKKNKKKNPNKTQTSSYQYCCTCHFSSSSTHQH---QPSAPPLPPWLNDDPTFLAPSTQSQSDHPDRADEMVEPLVA
        + + P IMLKATKKKLKGLWSKMKKKNKKK PN+TQT+SYQYCC CH  SSSTHQH   QPSAPPLP WLND PTFL PSTQSQ +HPD ADEMVEPLVA
Subjt:  KFKKPNIMLKATKKKLKGLWSKMKKKNKKKNPNKTQTSSYQYCCTCHFSSSSTHQH---QPSAPPLPPWLNDDPTFLAPSTQSQSDHPDRADEMVEPLVA

Query:  NQWSYQQYLVAEPVYGVPVIVETESRRDQKWKRLIKLFDCFFPCFGITQQLYYIP
        NQWSYQQYLVAEPVYGVP+IVETES R QKWKRLIKLF+C  PCFGITQQLYY+P
Subjt:  NQWSYQQYLVAEPVYGVPVIVETESRRDQKWKRLIKLFDCFFPCFGITQQLYYIP

OMO95513.1 hypothetical protein CCACVL1_05385 [Corchorus capsularis]3.6e-1036.69Show/hide
Query:  MLKATKKKLKGLWSKMKKKNKKKNPNKTQ--TSSYQYCCTCHFSSSSTHQHQPSAPPLPPWLNDDPTFLAPSTQSQSDHPDRADEMVEPLV---------
        M KA  KKLK  WS+ K+K K   P  +   +S Y     C++S SS    QPSAPPLPPWL ++ T  A     Q+D P    E+  P +         
Subjt:  MLKATKKKLKGLWSKMKKKNKKKNPNKTQ--TSSYQYCCTCHFSSSSTHQHQPSAPPLPPWLNDDPTFLAPSTQSQSDHPDRADEMVEPLV---------

Query:  -----ANQWSYQQYLVAEPVYGVPVIVETE-----SRRDQKWKRL-------IKLFDCFFPCFGITQQL
                 SYQQY+V  PVYGVPV+V+ +     SRR++            + LF CF PCF I  ++
Subjt:  -----ANQWSYQQYLVAEPVYGVPVIVETE-----SRRDQKWKRL-------IKLFDCFFPCFGITQQL

XP_022933064.1 uncharacterized protein LOC111439771 [Cucurbita moschata]1.3e-1747.95Show/hide
Query:  MLKATKKKLKGLWSKMKKKNKKKNPNKTQTSSYQYCCTCHFSSSSTHQHQPSAPPLPPWLNDDPTFLAPSTQSQSDHPDRADEMVEPLVANQWSYQQYLV
        MLKA KKKLK  WS+ KK+ K  NPN        +CCTCH SS+     QPSAPPLPPWL DD  F        S+HP+ A E+  PLVA    YQ Y+ 
Subjt:  MLKATKKKLKGLWSKMKKKNKKKNPNKTQTSSYQYCCTCHFSSSSTHQHQPSAPPLPPWLNDDPTFLAPSTQSQSDHPDRADEMVEPLVANQWSYQQYLV

Query:  AEPVYGVPVIVETESRRDQKWKRL-----------IKLFDCFFPCF
         +PVYGVP+IV+T+SRRD    R            I++  CF PCF
Subjt:  AEPVYGVPVIVETESRRDQKWKRL-----------IKLFDCFFPCF

TrEMBL top hitse value%identityAlignment
A0A0A0KJG0 Uncharacterized protein2.4e-6582.58Show/hide
Query:  KFKKPNIMLKATKKKLKGLWSKMKKKNKKKNPNKTQTSSYQYCCTCHFSSSSTHQH---QPSAPPLPPWLNDDPTFLAPSTQSQSDHPDRADEMVEPLVA
        + + P IMLKATKKKLKGLWSKMKKKNKKK PN+TQT+SYQYCC CH  SSSTHQH   QPSAPPLP WLND PTFL PSTQSQ +HPD ADEMVEPLVA
Subjt:  KFKKPNIMLKATKKKLKGLWSKMKKKNKKKNPNKTQTSSYQYCCTCHFSSSSTHQH---QPSAPPLPPWLNDDPTFLAPSTQSQSDHPDRADEMVEPLVA

Query:  NQWSYQQYLVAEPVYGVPVIVETESRRDQKWKRLIKLFDCFFPCFGITQQLYYIP
        NQWSYQQYLVAEPVYGVP+IVETES R QKWKRLIKLF+C  PCFGITQQLYY+P
Subjt:  NQWSYQQYLVAEPVYGVPVIVETESRRDQKWKRLIKLFDCFFPCFGITQQLYYIP

A0A1R3JL32 Uncharacterized protein1.7e-1036.69Show/hide
Query:  MLKATKKKLKGLWSKMKKKNKKKNPNKTQ--TSSYQYCCTCHFSSSSTHQHQPSAPPLPPWLNDDPTFLAPSTQSQSDHPDRADEMVEPLV---------
        M KA  KKLK  WS+ K+K K   P  +   +S Y     C++S SS    QPSAPPLPPWL ++ T  A     Q+D P    E+  P +         
Subjt:  MLKATKKKLKGLWSKMKKKNKKKNPNKTQ--TSSYQYCCTCHFSSSSTHQHQPSAPPLPPWLNDDPTFLAPSTQSQSDHPDRADEMVEPLV---------

Query:  -----ANQWSYQQYLVAEPVYGVPVIVETE-----SRRDQKWKRL-------IKLFDCFFPCFGITQQL
                 SYQQY+V  PVYGVPV+V+ +     SRR++            + LF CF PCF I  ++
Subjt:  -----ANQWSYQQYLVAEPVYGVPVIVETE-----SRRDQKWKRL-------IKLFDCFFPCFGITQQL

A0A5A7UIP5 AUX/IAA protein4.0e-6082.07Show/hide
Query:  MLKATKKKLKGLWSKMKKKNKKKNPNKTQTSSYQYCCTCHFSSSSTHQHQPSAPPLPPWLNDDPTFLAPSTQSQSDHPDRADEMVEPLVANQWSYQQYLV
        MLKATKKKLKGLWSKM    KKK PNKTQT+ YQYCC+CH SSSS   HQPSAPPLPPWLN+DPTFL P TQSQ +HPDRAD M    V NQWSYQQYLV
Subjt:  MLKATKKKLKGLWSKMKKKNKKKNPNKTQTSSYQYCCTCHFSSSSTHQHQPSAPPLPPWLNDDPTFLAPSTQSQSDHPDRADEMVEPLVANQWSYQQYLV

Query:  AEPVYGVPVIVETESRRDQKWKRLIKLFDCFFPCFGITQQLYYIP
        AEPVYGVP+IV+TESRRDQKWKRLIKLFDCF PCFGITQQLYYIP
Subjt:  AEPVYGVPVIVETESRRDQKWKRLIKLFDCFFPCFGITQQLYYIP

A0A6J1EYP6 uncharacterized protein LOC1114397716.5e-1847.95Show/hide
Query:  MLKATKKKLKGLWSKMKKKNKKKNPNKTQTSSYQYCCTCHFSSSSTHQHQPSAPPLPPWLNDDPTFLAPSTQSQSDHPDRADEMVEPLVANQWSYQQYLV
        MLKA KKKLK  WS+ KK+ K  NPN        +CCTCH SS+     QPSAPPLPPWL DD  F        S+HP+ A E+  PLVA    YQ Y+ 
Subjt:  MLKATKKKLKGLWSKMKKKNKKKNPNKTQTSSYQYCCTCHFSSSSTHQHQPSAPPLPPWLNDDPTFLAPSTQSQSDHPDRADEMVEPLVANQWSYQQYLV

Query:  AEPVYGVPVIVETESRRDQKWKRL-----------IKLFDCFFPCF
         +PVYGVP+IV+T+SRRD    R            I++  CF PCF
Subjt:  AEPVYGVPVIVETESRRDQKWKRL-----------IKLFDCFFPCF

A0A6J5TV75 Uncharacterized protein2.5e-0934.81Show/hide
Query:  MLKATKKKLKGLWSKMKKKNKKKN------------PNKTQTSSYQYCCTCHFSSSSTHQHQPSAPPLPPWLNDDPT---FLAPSTQSQSDHPDRAD-EM
        M+KA  KKLK  WS+ K+K K  +            P         +CC+C   SSST+  QPSAPPLPPWL+ + T     AP  Q   +   +AD   
Subjt:  MLKATKKKLKGLWSKMKKKNKKKN------------PNKTQTSSYQYCCTCHFSSSSTHQHQPSAPPLPPWLNDDPT---FLAPSTQSQSDHPDRAD-EM

Query:  VEP------------LVANQWSYQQYLVAEPVYGVPVI-VETESRRDQKWKRL-------------IKLFDCFFPCFGITQ
         EP            +     SYQQY+V +PVYGVPV   +T++ R  + +R              I+ F CF PCF I +
Subjt:  VEP------------LVANQWSYQQYLVAEPVYGVPVI-VETESRRDQKWKRL-------------IKLFDCFFPCFGITQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTCTTCCACCACAAATTCAAAAAACCCAACATAATGCTCAAAGCCACAAAGAAGAAACTCAAAGGATTATGGTCCAAAATGAAGAAGAAGAATAAGAAGAAAAA
CCCAAACAAAACCCAAACAAGTTCCTACCAATATTGCTGCACTTGCCATTTCTCCTCCTCAAGTACCCATCAGCATCAGCCCTCAGCTCCCCCACTTCCGCCATGGCTCA
ACGATGATCCCACCTTTCTGGCGCCTTCAACGCAATCGCAATCGGATCATCCAGACAGAGCTGATGAAATGGTGGAGCCGCTTGTGGCTAATCAGTGGTCGTACCAGCAA
TACTTGGTGGCAGAACCGGTTTACGGGGTGCCCGTCATTGTGGAAACAGAAAGTAGAAGAGATCAGAAATGGAAAAGGTTGATTAAGTTATTTGATTGCTTCTTTCCCTG
TTTTGGCATTACACAACAACTTTACTACATACCATAG
mRNA sequenceShow/hide mRNA sequence
ATCACATGTTCTTCTTCCACCACAAATTCAAAAAACCCAACATAATGCTCAAAGCCACAAAGAAGAAACTCAAAGGATTATGGTCCAAAATGAAGAAGAAGAATAAGAAG
AAAAACCCAAACAAAACCCAAACAAGTTCCTACCAATATTGCTGCACTTGCCATTTCTCCTCCTCAAGTACCCATCAGCATCAGCCCTCAGCTCCCCCACTTCCGCCATG
GCTCAACGATGATCCCACCTTTCTGGCGCCTTCAACGCAATCGCAATCGGATCATCCAGACAGAGCTGATGAAATGGTGGAGCCGCTTGTGGCTAATCAGTGGTCGTACC
AGCAATACTTGGTGGCAGAACCGGTTTACGGGGTGCCCGTCATTGTGGAAACAGAAAGTAGAAGAGATCAGAAATGGAAAAGGTTGATTAAGTTATTTGATTGCTTCTTT
CCCTGTTTTGGCATTACACAACAACTTTACTACATACCATAG
Protein sequenceShow/hide protein sequence
MFFFHHKFKKPNIMLKATKKKLKGLWSKMKKKNKKKNPNKTQTSSYQYCCTCHFSSSSTHQHQPSAPPLPPWLNDDPTFLAPSTQSQSDHPDRADEMVEPLVANQWSYQQ
YLVAEPVYGVPVIVETESRRDQKWKRLIKLFDCFFPCFGITQQLYYIP