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PI0002284 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002284
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr09:11227475..11228305
RNA-Seq ExpressionPI0002284
SyntenyPI0002284
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049609.1 transposase [Cucumis melo var. makuwa]3.5e-2160.23Show/hide
Query:  SNTNGKYQLYPHQLTTEASMWLFFIKKKIFPTRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVK
        S    + QL+PHQLT EA++WLFFIKKKIFPT  DSTI  E A++LYCI AKK  NLG ++  + LSWMR PK A PFP+T++ LC+K
Subjt:  SNTNGKYQLYPHQLTTEASMWLFFIKKKIFPTRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVK

KAA0050752.1 hypothetical protein E6C27_scaffold46449G00010 [Cucumis melo var. makuwa]4.7e-1847.69Show/hide
Query:  TRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVKVVPFLCAIQAIPIPSGLCNQMALNRMITFHRHKEMERRAKTLD
        TR D+TI L  AM++YCI  K  VNLG +I  SILS M+APK  MPFP TI+ALC+K VP L      PI S +C+Q+ LN+ IT H++KE +R  KTL+
Subjt:  TRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVKVVPFLCAIQAIPIPSGLCNQMALNRMITFHRHKEMERRAKTLD

Query:  DTPEGTAQAERKRKSPAATSNPPPKVKKSR
               + E K  SP     PPP +K+ +
Subjt:  DTPEGTAQAERKRKSPAATSNPPPKVKKSR

KAA0054837.1 hypothetical protein E6C27_scaffold406G00150 [Cucumis melo var. makuwa]6.2e-1849.51Show/hide
Query:  KYQLYPHQLTTEASMWLFFIKKKIFPTRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVKVVPFL-CAIQAIPIPSG
        KY+L+ H LTTEAS+WL FIKKK+ PTR D+TI+ E  MLLYCIM +  V++ E+I   I +W++ P+GA PFP  IE LC++    L  + Q   +  G
Subjt:  KYQLYPHQLTTEASMWLFFIKKKIFPTRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVKVVPFL-CAIQAIPIPSG

Query:  LCN
        +CN
Subjt:  LCN

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]1.6e-2156.12Show/hide
Query:  KYQLYPHQLTTEASMWLFFIKKKIFPTRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVKVVPFLCAIQAIPIPS
        +YQLYPH LTT+A++W+FF K KIFPT  DSTI+++  ++LYCIM KK +NL E+I  +IL+WM  PK AMPFPS +E LC+K +P L       IPS
Subjt:  KYQLYPHQLTTEASMWLFFIKKKIFPTRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVKVVPFLCAIQAIPIPS

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]3.5e-2160.23Show/hide
Query:  SNTNGKYQLYPHQLTTEASMWLFFIKKKIFPTRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVK
        S    + QL+PHQLT EA++WLFFIKKKIFPT  DSTI  E A++LYCI AKK  NLG ++  + LSWMR PK A PFP+T++ LC+K
Subjt:  SNTNGKYQLYPHQLTTEASMWLFFIKKKIFPTRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVK

TrEMBL top hitse value%identityAlignment
A0A5A7U4J2 Uncharacterized protein2.3e-1847.69Show/hide
Query:  TRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVKVVPFLCAIQAIPIPSGLCNQMALNRMITFHRHKEMERRAKTLD
        TR D+TI L  AM++YCI  K  VNLG +I  SILS M+APK  MPFP TI+ALC+K VP L      PI S +C+Q+ LN+ IT H++KE +R  KTL+
Subjt:  TRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVKVVPFLCAIQAIPIPSGLCNQMALNRMITFHRHKEMERRAKTLD

Query:  DTPEGTAQAERKRKSPAATSNPPPKVKKSR
               + E K  SP     PPP +K+ +
Subjt:  DTPEGTAQAERKRKSPAATSNPPPKVKKSR

A0A5A7U806 Transposase1.7e-2160.23Show/hide
Query:  SNTNGKYQLYPHQLTTEASMWLFFIKKKIFPTRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVK
        S    + QL+PHQLT EA++WLFFIKKKIFPT  DSTI  E A++LYCI AKK  NLG ++  + LSWMR PK A PFP+T++ LC+K
Subjt:  SNTNGKYQLYPHQLTTEASMWLFFIKKKIFPTRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVK

A0A5A7V6M5 Gag/pol protein7.6e-2256.12Show/hide
Query:  KYQLYPHQLTTEASMWLFFIKKKIFPTRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVKVVPFLCAIQAIPIPS
        +YQLYPH LTT+A++W+FF K KIFPT  DSTI+++  ++LYCIM KK +NL E+I  +IL+WM  PK AMPFPS +E LC+K +P L       IPS
Subjt:  KYQLYPHQLTTEASMWLFFIKKKIFPTRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVKVVPFLCAIQAIPIPS

A0A5D3CVL7 Uncharacterized protein1.7e-2160.23Show/hide
Query:  SNTNGKYQLYPHQLTTEASMWLFFIKKKIFPTRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVK
        S    + QL+PHQLT EA++WLFFIKKKIFPT  DSTI  E A++LYCI AKK  NLG ++  + LSWMR PK A PFP+T++ LC+K
Subjt:  SNTNGKYQLYPHQLTTEASMWLFFIKKKIFPTRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVK

A0A5D3DVQ6 Uncharacterized protein3.0e-1849.51Show/hide
Query:  KYQLYPHQLTTEASMWLFFIKKKIFPTRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVKVVPFL-CAIQAIPIPSG
        KY+L+ H LTTEAS+WL FIKKK+ PTR D+TI+ E  MLLYCIM +  V++ E+I   I +W++ P+GA PFP  IE LC++    L  + Q   +  G
Subjt:  KYQLYPHQLTTEASMWLFFIKKKIFPTRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVKVVPFL-CAIQAIPIPSG

Query:  LCN
        +CN
Subjt:  LCN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAAGTAACACCAACGGGAAGTATCAGCTTTATCCGCATCAGCTAACCACAGAGGCAAGCATGTGGCTATTTTTCATCAAGAAGAAGATCTTCCCAACGCGCCGTGA
TAGCACCATTAACTTAGAGTCAGCGATGCTACTCTATTGTATAATGGCGAAGAAGCGCGTCAACCTTGGCGAGCTTATAGCCACATCCATTCTGTCGTGGATGCGAGCTC
CTAAAGGCGCCATGCCCTTTCCTTCCACCATTGAAGCCCTTTGCGTTAAGGTTGTGCCATTCCTATGCGCCATCCAAGCAATTCCAATACCAAGCGGGCTGTGTAACCAG
ATGGCTTTAAACCGCATGATCACTTTCCATAGACACAAAGAAATGGAAAGGCGGGCAAAGACTTTGGACGACACACCTGAAGGCACGGCCCAAGCAGAACGCAAAAGGAA
GTCCCCAGCCGCCACATCAAACCCCCCACCTAAAGTCAAAAAATCAAGAGTTGATGTGGCGAAGCAGCCACCACCACTGAAGATCATCCACCCCTCATCTCGCCCAATCA
AGCGAGCTCCCCCACCAGTCCAAAGCAAATCCAGCAACTCTCAACCTTCACGCCCTTCTTCGCTCATTCCACCCACACCACCTTCGCCAATTCCCTCTCCCCGCCATTCA
CCTCTCCCCCACATTCTTTCCCCCATCAACATCCCTAACCTTTCCCCCACGACCACCTACCCCTCCGCCAAAAAAATCCAATTCCTCACCCTTCCCGATTTTGCCTTAAA
TTTTGCCTTACCCATGAATGATTGCATGATTGAAATCATGAATGCTTGCTTAAATGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAAGTAACACCAACGGGAAGTATCAGCTTTATCCGCATCAGCTAACCACAGAGGCAAGCATGTGGCTATTTTTCATCAAGAAGAAGATCTTCCCAACGCGCCGTGA
TAGCACCATTAACTTAGAGTCAGCGATGCTACTCTATTGTATAATGGCGAAGAAGCGCGTCAACCTTGGCGAGCTTATAGCCACATCCATTCTGTCGTGGATGCGAGCTC
CTAAAGGCGCCATGCCCTTTCCTTCCACCATTGAAGCCCTTTGCGTTAAGGTTGTGCCATTCCTATGCGCCATCCAAGCAATTCCAATACCAAGCGGGCTGTGTAACCAG
ATGGCTTTAAACCGCATGATCACTTTCCATAGACACAAAGAAATGGAAAGGCGGGCAAAGACTTTGGACGACACACCTGAAGGCACGGCCCAAGCAGAACGCAAAAGGAA
GTCCCCAGCCGCCACATCAAACCCCCCACCTAAAGTCAAAAAATCAAGAGTTGATGTGGCGAAGCAGCCACCACCACTGAAGATCATCCACCCCTCATCTCGCCCAATCA
AGCGAGCTCCCCCACCAGTCCAAAGCAAATCCAGCAACTCTCAACCTTCACGCCCTTCTTCGCTCATTCCACCCACACCACCTTCGCCAATTCCCTCTCCCCGCCATTCA
CCTCTCCCCCACATTCTTTCCCCCATCAACATCCCTAACCTTTCCCCCACGACCACCTACCCCTCCGCCAAAAAAATCCAATTCCTCACCCTTCCCGATTTTGCCTTAAA
TTTTGCCTTACCCATGAATGATTGCATGATTGAAATCATGAATGCTTGCTTAAATGTTTGA
Protein sequenceShow/hide protein sequence
MGSNTNGKYQLYPHQLTTEASMWLFFIKKKIFPTRRDSTINLESAMLLYCIMAKKRVNLGELIATSILSWMRAPKGAMPFPSTIEALCVKVVPFLCAIQAIPIPSGLCNQ
MALNRMITFHRHKEMERRAKTLDDTPEGTAQAERKRKSPAATSNPPPKVKKSRVDVAKQPPPLKIIHPSSRPIKRAPPPVQSKSSNSQPSRPSSLIPPTPPSPIPSPRHS
PLPHILSPINIPNLSPTTTYPSAKKIQFLTLPDFALNFALPMNDCMIEIMNACLNV