; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0002286 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002286
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr12:22087166..22087753
RNA-Seq ExpressionPI0002286
SyntenyPI0002286
Gene Ontology termsGO:0006402 - mRNA catabolic process (biological process)
GO:0090503 - RNA phosphodiester bond hydrolysis, exonucleolytic (biological process)
GO:0005634 - nucleus (cellular component)
GO:0005737 - cytoplasm (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6604931.1 putative CCR4-associated factor 1-like 8, partial [Cucurbita argyrosperma subsp. sororia]7.6e-6365.98Show/hide
Query:  RNPSCIRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNP
        R PS I++VWASNF+ EI+RL++CLQ  +ILSIDTEFPGCIR+TP GS D+ +Y+DLRFNVNQTKLIQLGLTASD+SG++  SWEFNFSDFD QID  NP
Subjt:  RNPSCIRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNP

Query:  -SFSFLQQNGLDFNKLKNYGIPINL--VNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG
         S SFL+QNGLDF KLK  GIP++L  +NF  IIR+  +  WVTFH LYDIGYL+K M + E LPESM EF  +V R +G+VRDLK +AR+ +G
Subjt:  -SFSFLQQNGLDFNKLKNYGIPINL--VNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG

XP_022947867.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]7.6e-6365.46Show/hide
Query:  RNPSCIRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNP
        R PS I++VWASNF+ EI+RL++CLQ  +ILSIDTEFPGCIR+TP GS D+ +Y+DLRFNVNQTKLIQLGLTASD+SG++  SWEFNFSDFD QID  NP
Subjt:  RNPSCIRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNP

Query:  -SFSFLQQNGLDFNKLKNYGIPINL--VNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG
         S +FL+QNGLDF KLK  GIP++L  +NF  IIR+  +  WVTFH LYDIGYL+K M + E LPESM EF  +V R +G+VRDLK +AR+ +G
Subjt:  -SFSFLQQNGLDFNKLKNYGIPINL--VNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG

XP_023533171.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]1.7e-6265.46Show/hide
Query:  RNPSCIRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNP
        R PS I++VWASNF+ EI+RL++CLQ  +ILSIDTEFPGCIR+TP GS D+ +Y+DLRFNVNQTKLIQLGLTASD+SG++  SWEFNFSDFD QID  NP
Subjt:  RNPSCIRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNP

Query:  -SFSFLQQNGLDFNKLKNYGIPINL--VNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG
         S SFL+QNGLDF KLK  GIP++L  + F  IIR+  +  WVTFH LYDIGYL+K M + E LPESM EF  +V R +G+VRDLK +AR+ +G
Subjt:  -SFSFLQQNGLDFNKLKNYGIPINL--VNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG

XP_023533172.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]5.5e-6162.96Show/hide
Query:  IRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNP-SFSF
        IR+VWA N + EIIRL +CL  Y+++SIDTEFPGCI+ TP G+ D+ LY D RFNVNQTK+IQLG+T SD+ G IG +WEFNFSDFDP+IDAHNP S  F
Subjt:  IRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNP-SFSF

Query:  LQQNGLDFNKLKNYGIPIN--LVNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG
        L+QNGLDF KLK  GI +    + FL+ IRKH I+ WVTFH LYDIGYL+  M +++ LPE++ EF  +V RR+G VRDLKHMARF +G
Subjt:  LQQNGLDFNKLKNYGIPIN--LVNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG

XP_038895744.1 putative CCR4-associated factor 1 homolog 8 [Benincasa hispida]9.6e-7474.87Show/hide
Query:  SCIRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNP-SF
        S I +VWASNF+ EI +L++CL+F+ I+SIDTEFPG IRN+P GS D+ LY+D RFNVNQTKLIQLGLTA DDSG+IG SWEFNFSDFDP+IDA +P S 
Subjt:  SCIRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNP-SF

Query:  SFLQQNGLDFNKLKNYGIPINL--VNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG
        SFL+QNGLDFNKLK YGIPINL    F+HIIRKHN+F WVTFH LYDIGYLIK M I EVLPE+M EF  VVVRRLGIVRDLKHMARF +G
Subjt:  SFLQQNGLDFNKLKNYGIPINL--VNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG

TrEMBL top hitse value%identityAlignment
A0A0A0LPP0 Poly(A)-specific ribonuclease4.5e-6163.78Show/hide
Query:  TTRNPSCIRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAH
        +TR    IRQVWASNF+ EI R  +CL+F+ IL+IDTEFPG I  +PRGS D  LY+D  FNVNQTKLIQLG+TASDD G+IG SWEFNFSDFD + DAH
Subjt:  TTRNPSCIRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAH

Query:  NP-SFSFLQQNGLDFNKLKNYGIPIN--LVNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG
        +P +  FL+ NGLD  K+K  GIPI      FL I+RK +IF WVTFH LYDIGYLIK M ++ VLP+SM EF  VVV  +GIVRDLKHMA+F +G
Subjt:  NP-SFSFLQQNGLDFNKLKNYGIPIN--LVNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG

A0A5A7TRG1 Poly(A)-specific ribonuclease5.9e-6165.08Show/hide
Query:  IRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNPS-FSF
        IRQVWASNFN EI +  +CL+F+ IL+IDTEFPG I  +PR S D+ +Y++ RFNVNQ KLIQLG+TAS+D G+IG SWEFNFSDFD Q+D+H+PS   F
Subjt:  IRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNPS-FSF

Query:  LQQNGLDFNKLKNYGIPIN--LVNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG
        L++NGLDF KLK YGIPI      FL II+K +IF WVTFH LYDIGYLIK M ++ VLP+SM EF  +VV  +GIVRDLKHMARF +G
Subjt:  LQQNGLDFNKLKNYGIPIN--LVNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG

A0A6J1G7L2 Poly(A)-specific ribonuclease3.7e-6365.46Show/hide
Query:  RNPSCIRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNP
        R PS I++VWASNF+ EI+RL++CLQ  +ILSIDTEFPGCIR+TP GS D+ +Y+DLRFNVNQTKLIQLGLTASD+SG++  SWEFNFSDFD QID  NP
Subjt:  RNPSCIRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNP

Query:  -SFSFLQQNGLDFNKLKNYGIPINL--VNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG
         S +FL+QNGLDF KLK  GIP++L  +NF  IIR+  +  WVTFH LYDIGYL+K M + E LPESM EF  +V R +G+VRDLK +AR+ +G
Subjt:  -SFSFLQQNGLDFNKLKNYGIPINL--VNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG

A0A6J1G7T4 Poly(A)-specific ribonuclease5.9e-6162.96Show/hide
Query:  IRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNP-SFSF
        IR+VWA N + EIIRL +CL  Y+I+SIDTEFPGCI+ TP G+ D+ LY D RFNVNQTK+IQLG+T SD+SG IG +WEFNFSDFDP+IDAHNP S  F
Subjt:  IRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNP-SFSF

Query:  LQQNGLDFNKLKNYGIPIN--LVNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG
        L+QNGLDF KLK  GI +    + FL+ + KH I+ WVTFH LYDIGYL+  M +++ LPE++ EF  +V RR+G VRDLKHMARF +G
Subjt:  LQQNGLDFNKLKNYGIPIN--LVNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG

A0A6J1I6H7 Poly(A)-specific ribonuclease1.1e-5961.38Show/hide
Query:  IRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNP-SFSF
        I +VWA N + EI+RL  CL  Y ++SIDTEFPGCI+ TP G+ D+ LY D RFNVNQTK+IQLG+T SD+SG IG +WEFNFSDFDP+IDAHNP S  F
Subjt:  IRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNP-SFSF

Query:  LQQNGLDFNKLKNYGIPIN--LVNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG
        L+QNGLDF KLK  GI +    + FL+ +RKH I  W+TFH LYDIGYLI  + +++ LPE++ EF  +V RR+G VRDLKHMARF +G
Subjt:  LQQNGLDFNKLKNYGIPIN--LVNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG

SwissProt top hitse value%identityAlignment
O64773 Probable CCR4-associated factor 1 homolog 54.9e-2840.74Show/hide
Query:  QVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHN-PSFSFLQ
        +VW  N   E+  ++ CL+  N ++IDTEFPGC++ TP  ++D++ Y+D++FNV+ T LIQLGLT       I  +WE N SDF+      N  S +FL+
Subjt:  QVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHN-PSFSFLQ

Query:  QNGLDFNKLKNYGIPIN--LVNFLHII-RKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLG-IVRDLKHMARFVKG
         NGLD +K++  GI I    + F  I+  KH    WVTF   YD  YL+K +   + LPE+  EF   V + LG  V D+K MA    G
Subjt:  QNGLDFNKLKNYGIPIN--LVNFLHII-RKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLG-IVRDLKHMARFVKG

Q9C6M9 Putative CCR4-associated factor 1 homolog 43.5e-2637.57Show/hide
Query:  QVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDF-DPQIDAHNPSFSFLQ
        +VW  N  +E+  ++ CL+ ++ ++IDTEFPGC++ TP  +++++ Y+D++FNV+ T LIQLG T  D  G I  +WE N SDF + +   ++ S +FL+
Subjt:  QVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDF-DPQIDAHNPSFSFLQ

Query:  QNGLDFNKLKNYGIPIN--LVNFLHIIR-KHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLG-IVRDLKHMARFVKG
         NGL+ +K+   GI I     +F  I++ K     WV F   YD  YL+K +   + LPE+  EF   V + LG  V D+K +A    G
Subjt:  QNGLDFNKLKNYGIPIN--LVNFLHIIR-KHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLG-IVRDLKHMARFVKG

Q9LXM4 Putative CCR4-associated factor 1 homolog 82.6e-2943.1Show/hide
Query:  LQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNPSFSFLQQNGLDFNKLKNYGI
        ++ CL+ Y  ++IDTEFP  +R T + +TD+  Y D+ F+V++ KLIQLGLT  D +GRIG +WE NFSDF      +  S  FL++NGLD  K++  GI
Subjt:  LQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNPSFSFLQQNGLDFNKLKNYGI

Query:  PIN---LVNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG
         I       F  + +      WVTFH  YDI YL+K     E LP +   F   V R LG V DLK MA   +G
Subjt:  PIN---LVNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG

Q9SFX6 Putative CCR4-associated factor 1 homolog 32.7e-2637.57Show/hide
Query:  QVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDP-QIDAHNPSFSFLQ
        +VW  N  +E+  ++ CL+  + ++IDTEFPGC++ TP  +++++ Y+D++FNV+ T LIQLG T  D  G    +WE N SDFD  +   ++ S +FL+
Subjt:  QVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDP-QIDAHNPSFSFLQ

Query:  QNGLDFNKLKNYGIPIN--LVNFLHII-RKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLG-IVRDLKHMARFVKG
         NGL+ +K++  GI I+    +F  I+  K     WV F   YD  YL+K +   + LPE+  EF   V + LG  V D+K +A    G
Subjt:  QNGLDFNKLKNYGIPIN--LVNFLHII-RKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLG-IVRDLKHMARFVKG

Q9SHJ0 Probable CCR4-associated factor 1 homolog 12.3e-2536.32Show/hide
Query:  RQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDF-DPQIDAHNPSFSFL
        R+VW SN + E+ R+ +CL+ + +++ DTE+PG I  T   S+    Y+ ++ NV  TKLIQ G T  +  G IG  WE NFS+F DP    +  S  FL
Subjt:  RQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDF-DPQIDAHNPSFSFL

Query:  QQNGLDFNKLKNYGIPINLVNF----LHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG
        +++GLD  K+++ G+ +    F    + + R      +VTF   YD  Y + ++   + LPE+  EF   VV+  G V D K MA F +G
Subjt:  QQNGLDFNKLKNYGIPINLVNF----LHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG

Arabidopsis top hitse value%identityAlignment
AT1G06450.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.6e-2636.32Show/hide
Query:  RQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDF-DPQIDAHNPSFSFL
        R+VW SN + E+ R+ +CL+ + +++ DTE+PG I  T   S+    Y+ ++ NV  TKLIQ G T  +  G IG  WE NFS+F DP    +  S  FL
Subjt:  RQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDF-DPQIDAHNPSFSFL

Query:  QQNGLDFNKLKNYGIPINLVNF----LHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG
        +++GLD  K+++ G+ +    F    + + R      +VTF   YD  Y + ++   + LPE+  EF   VV+  G V D K MA F +G
Subjt:  QQNGLDFNKLKNYGIPINLVNF----LHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG

AT1G27820.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.9e-2737.57Show/hide
Query:  QVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDP-QIDAHNPSFSFLQ
        +VW  N  +E+  ++ CL+  + ++IDTEFPGC++ TP  +++++ Y+D++FNV+ T LIQLG T  D  G    +WE N SDFD  +   ++ S +FL+
Subjt:  QVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDP-QIDAHNPSFSFLQ

Query:  QNGLDFNKLKNYGIPIN--LVNFLHII-RKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLG-IVRDLKHMARFVKG
         NGL+ +K++  GI I+    +F  I+  K     WV F   YD  YL+K +   + LPE+  EF   V + LG  V D+K +A    G
Subjt:  QNGLDFNKLKNYGIPIN--LVNFLHII-RKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLG-IVRDLKHMARFVKG

AT1G27890.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.5e-2737.57Show/hide
Query:  QVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDF-DPQIDAHNPSFSFLQ
        +VW  N  +E+  ++ CL+ ++ ++IDTEFPGC++ TP  +++++ Y+D++FNV+ T LIQLG T  D  G I  +WE N SDF + +   ++ S +FL+
Subjt:  QVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDF-DPQIDAHNPSFSFLQ

Query:  QNGLDFNKLKNYGIPIN--LVNFLHIIR-KHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLG-IVRDLKHMARFVKG
         NGL+ +K+   GI I     +F  I++ K     WV F   YD  YL+K +   + LPE+  EF   V + LG  V D+K +A    G
Subjt:  QNGLDFNKLKNYGIPIN--LVNFLHIIR-KHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLG-IVRDLKHMARFVKG

AT1G61470.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein3.4e-2940.74Show/hide
Query:  QVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHN-PSFSFLQ
        +VW  N   E+  ++ CL+  N ++IDTEFPGC++ TP  ++D++ Y+D++FNV+ T LIQLGLT       I  +WE N SDF+      N  S +FL+
Subjt:  QVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHN-PSFSFLQ

Query:  QNGLDFNKLKNYGIPIN--LVNFLHII-RKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLG-IVRDLKHMARFVKG
         NGLD +K++  GI I    + F  I+  KH    WVTF   YD  YL+K +   + LPE+  EF   V + LG  V D+K MA    G
Subjt:  QNGLDFNKLKNYGIPIN--LVNFLHII-RKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLG-IVRDLKHMARFVKG

AT3G44240.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.8e-3043.1Show/hide
Query:  LQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNPSFSFLQQNGLDFNKLKNYGI
        ++ CL+ Y  ++IDTEFP  +R T + +TD+  Y D+ F+V++ KLIQLGLT  D +GRIG +WE NFSDF      +  S  FL++NGLD  K++  GI
Subjt:  LQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNPSFSFLQQNGLDFNKLKNYGI

Query:  PIN---LVNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG
         I       F  + +      WVTFH  YDI YL+K     E LP +   F   V R LG V DLK MA   +G
Subjt:  PIN---LVNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTACAACAAGAAATCCTTCCTGCATTCGTCAAGTTTGGGCTTCTAATTTCAACATTGAAATCATCAGACTCCAAAAATGCCTTCAATTCTACAATATTTTATCAAT
TGACACTGAATTCCCAGGCTGTATTCGAAACACTCCTCGTGGCTCCACTGACCAATTGCTTTACCAAGATTTACGGTTCAACGTTAACCAAACCAAATTGATTCAATTGG
GTTTAACAGCTTCCGATGATTCTGGCAGAATCGGCAGTTCGTGGGAGTTTAATTTCTCTGATTTTGACCCACAAATTGACGCTCATAACCCTTCATTTTCTTTTCTTCAA
CAGAACGGGCTTGATTTCAATAAACTCAAGAATTACGGTATACCCATCAATTTAGTAAATTTCTTACACATCATACGAAAACACAACATTTTCATATGGGTCACCTTTCA
CAGGCTGTACGATATTGGGTATTTGATAAAAGTCATGCGAATAATGGAGGTGTTGCCGGAATCAATGGCTGAATTTGGTTTGGTGGTGGTGAGGAGATTGGGGATTGTTA
GAGATTTAAAACATATGGCTCGGTTTGTAAAGGGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCTACAACAAGAAATCCTTCCTGCATTCGTCAAGTTTGGGCTTCTAATTTCAACATTGAAATCATCAGACTCCAAAAATGCCTTCAATTCTACAATATTTTATCAAT
TGACACTGAATTCCCAGGCTGTATTCGAAACACTCCTCGTGGCTCCACTGACCAATTGCTTTACCAAGATTTACGGTTCAACGTTAACCAAACCAAATTGATTCAATTGG
GTTTAACAGCTTCCGATGATTCTGGCAGAATCGGCAGTTCGTGGGAGTTTAATTTCTCTGATTTTGACCCACAAATTGACGCTCATAACCCTTCATTTTCTTTTCTTCAA
CAGAACGGGCTTGATTTCAATAAACTCAAGAATTACGGTATACCCATCAATTTAGTAAATTTCTTACACATCATACGAAAACACAACATTTTCATATGGGTCACCTTTCA
CAGGCTGTACGATATTGGGTATTTGATAAAAGTCATGCGAATAATGGAGGTGTTGCCGGAATCAATGGCTGAATTTGGTTTGGTGGTGGTGAGGAGATTGGGGATTGTTA
GAGATTTAAAACATATGGCTCGGTTTGTAAAGGGTTAG
Protein sequenceShow/hide protein sequence
MATTRNPSCIRQVWASNFNIEIIRLQKCLQFYNILSIDTEFPGCIRNTPRGSTDQLLYQDLRFNVNQTKLIQLGLTASDDSGRIGSSWEFNFSDFDPQIDAHNPSFSFLQ
QNGLDFNKLKNYGIPINLVNFLHIIRKHNIFIWVTFHRLYDIGYLIKVMRIMEVLPESMAEFGLVVVRRLGIVRDLKHMARFVKG