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PI0002317 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002317
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionLINE-1 retrotransposable element ORF2 protein
Genome locationchr11:3297179..3297508
RNA-Seq ExpressionPI0002317
SyntenyPI0002317
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0045262.1 LINE-1 retrotransposable element ORF2 protein [Cucumis melo var. makuwa]3.5e-4179.82Show/hide
Query:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM
        MFLVKL +F+PLLD+TSFLAQ S DNAD+KFTPSK F+I ++RSP FIATLQLSP+WFT FS D+ HSS+VSLESFHDAILDGG+F++MTIHLLDKTNQM
Subjt:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM

Query:  ILRFDTPSS
        ILRFDTPSS
Subjt:  ILRFDTPSS

TYK02994.1 uncharacterized protein E5676_scaffold46G00830 [Cucumis melo var. makuwa]1.2e-4482.57Show/hide
Query:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM
        MFLVKLT+FEPLLDSTS+LAQ+SNDNAD+KF P KLFLIV NRSP F ATLQLSP+WF+N+S DHVHSS+VSLESFHDA+LDGG+FS+M+IHLLDKTNQM
Subjt:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM

Query:  ILRFDTPSS
         LRFDTPSS
Subjt:  ILRFDTPSS

XP_008464344.1 PREDICTED: uncharacterized protein LOC103502250 [Cucumis melo]3.5e-4179.82Show/hide
Query:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM
        MFLVKL +F+PLLD+TSFLAQ S DNAD+KFTPSK F+I ++RSP FIATLQLSP+WFT FS D+ HSS+VSLESFHDAILDGG+F++MTIHLLDKTNQM
Subjt:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM

Query:  ILRFDTPSS
        ILRFDTPSS
Subjt:  ILRFDTPSS

XP_031743957.1 uncharacterized protein LOC116404737 [Cucumis sativus]4.0e-4586.24Show/hide
Query:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM
        MFLVKLT+FEPLLDST FLA +SN+NA VKFTP KLFLIV+NR PNFIATLQLSP+WFTNFS DHVHSS+VSLESFHDA+LDGG FSTM+IHLLDKTNQM
Subjt:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM

Query:  ILRFDTPSS
        ILRFDTPSS
Subjt:  ILRFDTPSS

XP_031743987.1 uncharacterized protein LOC116404759 [Cucumis sativus]2.1e-4179.82Show/hide
Query:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM
        MFLVKLT+F+PLLD+TSF AQ S D+ADVKFTPSK F+I ++RSP FIATLQLSP+WFT+FS DH HSS+VSLESFHDAILDGG+F++MTIHLLDKTNQ+
Subjt:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM

Query:  ILRFDTPSS
        ILRFDTPSS
Subjt:  ILRFDTPSS

TrEMBL top hitse value%identityAlignment
A0A0A0K902 Uncharacterized protein1.0e-4179.82Show/hide
Query:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM
        MFLVKLT+F+PLLD+TSF AQ S D+ADVKFTPSK F+I ++RSP FIATLQLSP+WFT+FS DH HSS+VSLESFHDAILDGG+F++MTIHLLDKTNQ+
Subjt:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM

Query:  ILRFDTPSS
        ILRFDTPSS
Subjt:  ILRFDTPSS

A0A0A0K9W4 Uncharacterized protein1.9e-4586.24Show/hide
Query:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM
        MFLVKLT+FEPLLDST FLA +SN+NA VKFTP KLFLIV+NR PNFIATLQLSP+WFTNFS DHVHSS+VSLESFHDA+LDGG FSTM+IHLLDKTNQM
Subjt:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM

Query:  ILRFDTPSS
        ILRFDTPSS
Subjt:  ILRFDTPSS

A0A1S3CL88 uncharacterized protein LOC1035022501.7e-4179.82Show/hide
Query:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM
        MFLVKL +F+PLLD+TSFLAQ S DNAD+KFTPSK F+I ++RSP FIATLQLSP+WFT FS D+ HSS+VSLESFHDAILDGG+F++MTIHLLDKTNQM
Subjt:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM

Query:  ILRFDTPSS
        ILRFDTPSS
Subjt:  ILRFDTPSS

A0A5D3BV00 Uncharacterized protein5.6e-4582.57Show/hide
Query:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM
        MFLVKLT+FEPLLDSTS+LAQ+SNDNAD+KF P KLFLIV NRSP F ATLQLSP+WF+N+S DHVHSS+VSLESFHDA+LDGG+FS+M+IHLLDKTNQM
Subjt:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM

Query:  ILRFDTPSS
         LRFDTPSS
Subjt:  ILRFDTPSS

A0A5D3DZ07 LINE-1 retrotransposable element ORF2 protein1.7e-4179.82Show/hide
Query:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM
        MFLVKL +F+PLLD+TSFLAQ S DNAD+KFTPSK F+I ++RSP FIATLQLSP+WFT FS D+ HSS+VSLESFHDAILDGG+F++MTIHLLDKTNQM
Subjt:  MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQM

Query:  ILRFDTPSS
        ILRFDTPSS
Subjt:  ILRFDTPSS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTCTTGGTCAAGCTTACAGACTTTGAGCCTCTTCTTGACTCAACCTCCTTTCTTGCTCAATTTTCTAACGATAATGCCGACGTCAAATTCACACCATCGAAGCTCTT
CTTAATCGTCACGAACCGTTCCCCTAACTTCATTGCAACGTTACAATTGTCGCCAAAATGGTTCACCAACTTTTCCGCCGATCATGTTCATAGTTCCCAGGTTTCCCTTG
AATCCTTCCACGATGCTATATTGGATGGTGGAAATTTTTCTACAATGACAATCCATCTTTTGGACAAAACAAACCAAATGATCCTTAGATTTGATACTCCTTCAAGTTAG
mRNA sequenceShow/hide mRNA sequence
ATGTTCTTGGTCAAGCTTACAGACTTTGAGCCTCTTCTTGACTCAACCTCCTTTCTTGCTCAATTTTCTAACGATAATGCCGACGTCAAATTCACACCATCGAAGCTCTT
CTTAATCGTCACGAACCGTTCCCCTAACTTCATTGCAACGTTACAATTGTCGCCAAAATGGTTCACCAACTTTTCCGCCGATCATGTTCATAGTTCCCAGGTTTCCCTTG
AATCCTTCCACGATGCTATATTGGATGGTGGAAATTTTTCTACAATGACAATCCATCTTTTGGACAAAACAAACCAAATGATCCTTAGATTTGATACTCCTTCAAGTTAG
Protein sequenceShow/hide protein sequence
MFLVKLTDFEPLLDSTSFLAQFSNDNADVKFTPSKLFLIVTNRSPNFIATLQLSPKWFTNFSADHVHSSQVSLESFHDAILDGGNFSTMTIHLLDKTNQMILRFDTPSS