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PI0002330 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002330
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionReverse transcriptase domain-containing protein
Genome locationchr10:942009..942413
RNA-Seq ExpressionPI0002330
SyntenyPI0002330
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047412.1 putative non-LTR retroelement reverse transcriptase [Cucumis melo var. makuwa]2.4e-2351.16Show/hide
Query:  YSFGHSAGKCPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQ
        ++FGHS+GK PR  ES+V QE  VS+ +PG   E     CGG+VLESFKQLE+ EI+ SP R  S    +  K+D+FT VTRKKRELVS+RDRGK   + 
Subjt:  YSFGHSAGKCPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQ

Query:  SLHNSFGSLSDLSEGENWALALRVSTPSP
        ++ NSFGSL  + + + WAL +   +P P
Subjt:  SLHNSFGSLSDLSEGENWALALRVSTPSP

KAA0060724.1 hypothetical protein E6C27_scaffold72G00110 [Cucumis melo var. makuwa]1.6e-1952.5Show/hide
Query:  FGHSAGKCPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQSL
        FGHS GKC R  ES+V QE  VS+  P  G       CG +VLESFKQLEE EI+ S  R  S    + GK+DDFT VTRKKRELV VRDRGK   + ++
Subjt:  FGHSAGKCPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQSL

Query:  HNSFGSLSDLSEGENWALAL
         N FGSL ++ + + WAL +
Subjt:  HNSFGSLSDLSEGENWALAL

KAA0062888.1 non-LTR retroelement reverse transcriptase-like protein [Cucumis melo var. makuwa]1.2e-2251.16Show/hide
Query:  SFGHSAGKCPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQS
        + GHS GKCPR  ES++ QE  VS+ +PG G       C  +VLESFKQLEE EI+ SP R  S    + GK+D+FT VTRKK ELVSVRDRGK   + +
Subjt:  SFGHSAGKCPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQS

Query:  LHNSFGSLSDLSEGENWALALRVSTPSPL
        + NSFGSL ++ + + WAL +   +P PL
Subjt:  LHNSFGSLSDLSEGENWALALRVSTPSPL

TYK23423.1 DUF4283 domain-containing protein [Cucumis melo var. makuwa]1.4e-2052.89Show/hide
Query:  CPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQSLHNSFGSL
        CPR  ES+V QE  VS+ +PG G       CG +VLESFKQLEE EI+ SP R  S    + GK D+FT VTRKKRELVSVRDRGK   + ++ NSFGSL
Subjt:  CPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQSLHNSFGSL

Query:  SDLSEGENWALALRVSTPSPL
         ++ +   WAL +   +P PL
Subjt:  SDLSEGENWALALRVSTPSPL

XP_008466769.1 PREDICTED: uncharacterized protein LOC103504100 [Cucumis melo]1.9e-2049.61Show/hide
Query:  SFGHSAGKCPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQS
        +FGHS  KC R  ES+  QE  V + + G         CG +VLESFKQLEE EI+ SP R  S     GGK D+FT VTRKK ELVSVRDRGK   +  
Subjt:  SFGHSAGKCPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQS

Query:  LHNSFGSLSDLSEGENWALALRVSTPSPL
        + NSFGSL ++ + + WAL++   +P PL
Subjt:  LHNSFGSLSDLSEGENWALALRVSTPSPL

TrEMBL top hitse value%identityAlignment
A0A1S3CRZ6 uncharacterized protein LOC1035041009.1e-2149.61Show/hide
Query:  SFGHSAGKCPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQS
        +FGHS  KC R  ES+  QE  V + + G         CG +VLESFKQLEE EI+ SP R  S     GGK D+FT VTRKK ELVSVRDRGK   +  
Subjt:  SFGHSAGKCPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQS

Query:  LHNSFGSLSDLSEGENWALALRVSTPSPL
        + NSFGSL ++ + + WAL++   +P PL
Subjt:  LHNSFGSLSDLSEGENWALALRVSTPSPL

A0A5A7TVB8 Putative non-LTR retroelement reverse transcriptase1.2e-2351.16Show/hide
Query:  YSFGHSAGKCPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQ
        ++FGHS+GK PR  ES+V QE  VS+ +PG   E     CGG+VLESFKQLE+ EI+ SP R  S    +  K+D+FT VTRKKRELVS+RDRGK   + 
Subjt:  YSFGHSAGKCPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQ

Query:  SLHNSFGSLSDLSEGENWALALRVSTPSP
        ++ NSFGSL  + + + WAL +   +P P
Subjt:  SLHNSFGSLSDLSEGENWALALRVSTPSP

A0A5A7V084 Exo_endo_phos domain-containing protein/DUF4283 domain-containing protein7.7e-2052.5Show/hide
Query:  FGHSAGKCPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQSL
        FGHS GKC R  ES+V QE  VS+  P  G       CG +VLESFKQLEE EI+ S  R  S    + GK+DDFT VTRKKRELV VRDRGK   + ++
Subjt:  FGHSAGKCPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQSL

Query:  HNSFGSLSDLSEGENWALAL
         N FGSL ++ + + WAL +
Subjt:  HNSFGSLSDLSEGENWALAL

A0A5A7V5J2 Non-LTR retroelement reverse transcriptase-like protein5.7e-2351.16Show/hide
Query:  SFGHSAGKCPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQS
        + GHS GKCPR  ES++ QE  VS+ +PG G       C  +VLESFKQLEE EI+ SP R  S    + GK+D+FT VTRKK ELVSVRDRGK   + +
Subjt:  SFGHSAGKCPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQS

Query:  LHNSFGSLSDLSEGENWALALRVSTPSPL
        + NSFGSL ++ + + WAL +   +P PL
Subjt:  LHNSFGSLSDLSEGENWALALRVSTPSPL

A0A5D3DIK9 DUF4283 domain-containing protein7.0e-2152.89Show/hide
Query:  CPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQSLHNSFGSL
        CPR  ES+V QE  VS+ +PG G       CG +VLESFKQLEE EI+ SP R  S    + GK D+FT VTRKKRELVSVRDRGK   + ++ NSFGSL
Subjt:  CPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQSLHNSFGSL

Query:  SDLSEGENWALALRVSTPSPL
         ++ +   WAL +   +P PL
Subjt:  SDLSEGENWALALRVSTPSPL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGAGGTATATTCATTTGGACATTCTGCTGGCAAATGTCCTCGGAAGGAGGAGTCTCAGGTACAACAGGAGGCGGATGTGAGTGAGGAAGTTCCTGGTACGGGTGT
TGAGCAAGCTATTGTGGCTTGTGGGGGTCTGGTGCTAGAGTCCTTTAAGCAGTTAGAGGAAGATGAGATTCAGGGTTCTCCGGTTCGGCAGAAGTCATCGACCATTAGCG
ATGGGGGTAAGAAGGATGATTTCACTCCTGTGACCCGTAAGAAGAGGGAGTTGGTTTCAGTGAGAGACAGAGGGAAAGGGAAGAGTATGCAGTCTTTACATAATTCATTT
GGCAGTCTTTCTGATTTAAGTGAGGGAGAAAATTGGGCATTGGCCTTACGGGTTAGTACGCCTTCACCCTTATAA
mRNA sequenceShow/hide mRNA sequence
ATGAAAGAGGTATATTCATTTGGACATTCTGCTGGCAAATGTCCTCGGAAGGAGGAGTCTCAGGTACAACAGGAGGCGGATGTGAGTGAGGAAGTTCCTGGTACGGGTGT
TGAGCAAGCTATTGTGGCTTGTGGGGGTCTGGTGCTAGAGTCCTTTAAGCAGTTAGAGGAAGATGAGATTCAGGGTTCTCCGGTTCGGCAGAAGTCATCGACCATTAGCG
ATGGGGGTAAGAAGGATGATTTCACTCCTGTGACCCGTAAGAAGAGGGAGTTGGTTTCAGTGAGAGACAGAGGGAAAGGGAAGAGTATGCAGTCTTTACATAATTCATTT
GGCAGTCTTTCTGATTTAAGTGAGGGAGAAAATTGGGCATTGGCCTTACGGGTTAGTACGCCTTCACCCTTATAA
Protein sequenceShow/hide protein sequence
MKEVYSFGHSAGKCPRKEESQVQQEADVSEEVPGTGVEQAIVACGGLVLESFKQLEEDEIQGSPVRQKSSTISDGGKKDDFTPVTRKKRELVSVRDRGKGKSMQSLHNSF
GSLSDLSEGENWALALRVSTPSPL