; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0002338 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002338
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
Descriptionribosome production factor 1-like
Genome locationchr04:6975891..6979729
RNA-Seq ExpressionPI0002338
SyntenyPI0002338
Gene Ontology termsGO:0000460 - maturation of 5.8S rRNA (biological process)
GO:0000470 - maturation of LSU-rRNA (biological process)
GO:0005730 - nucleolus (cellular component)
GO:0030687 - preribosome, large subunit precursor (cellular component)
GO:0042134 - rRNA primary transcript binding (molecular function)
InterPro domainsIPR007109 - Brix domain
IPR044281 - U3 snoRNP protein/Ribosome production factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_008443155.1 PREDICTED: ribosome production factor 1 isoform X1 [Cucumis melo]5.4e-17698.76Show/hide
Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKN+GIIPSMIKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL
        GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKK ADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL
Subjt:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKIE
        ISLQHGTFDSKGGEYEWVHK E
Subjt:  ISLQHGTFDSKGGEYEWVHKIE

XP_022155906.1 ribosome production factor 1-like [Momordica charantia]3.9e-16693.81Show/hide
Query:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKN R IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  DILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNS+IGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  DILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMK
        T H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIF+SKENKK ADSK  SKD KGEKVPQQKVIARLQECGPRFTMK
Subjt:  TGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKIE
        LISLQHGTFDSKGGEYEWVHK E
Subjt:  LISLQHGTFDSKGGEYEWVHKIE

XP_022156150.1 ribosome production factor 1-like [Momordica charantia]3.0e-16694.12Show/hide
Query:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKN R IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  DILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNSTIGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  DILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMK
        T H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIF+SKENKK ADSK  SKD KGEKVP+QKVIARLQECGPRFTMK
Subjt:  TGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKIE
        LISLQHGTFDSKGGEYEWVHK E
Subjt:  LISLQHGTFDSKGGEYEWVHKIE

XP_031737500.1 ribosome production factor 1 [Cucumis sativus]1.2e-17296.58Show/hide
Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKN+ I+PS IKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPK+LITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL
        GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKK ADSKKKSK TKGEKVPQQKVIARLQECGPRFTMKL
Subjt:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKIE
        ISLQHGTFDSKGGEYEWVHK E
Subjt:  ISLQHGTFDSKGGEYEWVHKIE

XP_038906205.1 ribosome production factor 1 [Benincasa hispida]6.6e-17497.2Show/hide
Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEE KNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDET+CKPDDEELFAGNDADEFSSIIKR+
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGP FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL
         HQPELVLTNFTTRLGLR+GRLIQ+LFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKK ADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL
Subjt:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKIE
        ISLQHGTFDSKGGEYEWVHK E
Subjt:  ISLQHGTFDSKGGEYEWVHKIE

TrEMBL top hitse value%identityAlignment
A0A0A0LH42 Brix domain-containing protein6.0e-17396.58Show/hide
Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKN+ I+PS IKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPK+LITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKI+EYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRK+IKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL
        GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKK ADSKKKSK TKGEKVPQQKVIARLQECGPRFTMKL
Subjt:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKIE
        ISLQHGTFDSKGGEYEWVHK E
Subjt:  ISLQHGTFDSKGGEYEWVHKIE

A0A1S3B854 ribosome production factor 1 isoform X12.6e-17698.76Show/hide
Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKN+GIIPSMIKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL
        GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKK ADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL
Subjt:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKIE
        ISLQHGTFDSKGGEYEWVHK E
Subjt:  ISLQHGTFDSKGGEYEWVHKIE

A0A5A7UHC7 Ribosome production factor 1 isoform X12.6e-17698.76Show/hide
Query:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
        MGEEKKN+GIIPSMIKNKEKRAEVHANLK+QKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD
Subjt:  MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRD

Query:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
        ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT
Subjt:  ILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPT

Query:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL
        GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKK ADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL
Subjt:  GHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKL

Query:  ISLQHGTFDSKGGEYEWVHKIE
        ISLQHGTFDSKGGEYEWVHK E
Subjt:  ISLQHGTFDSKGGEYEWVHKIE

A0A6J1DPH5 ribosome production factor 1-like1.4e-16694.12Show/hide
Query:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKN R IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  DILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNSTIGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  DILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMK
        T H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIF+SKENKK ADSK  SKD KGEKVP+QKVIARLQECGPRFTMK
Subjt:  TGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKIE
        LISLQHGTFDSKGGEYEWVHK E
Subjt:  LISLQHGTFDSKGGEYEWVHKIE

A0A6J1DT48 ribosome production factor 1-like1.9e-16693.81Show/hide
Query:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
        MGEEKKN R IIPSMIKNKEKR EVHANLK QKKLEKRKRAKARDA+EKQALELGEE PPR IPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR
Subjt:  MGEEKKN-RGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKR

Query:  DILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
          LPKVLITTCRFNS+IGP+FISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP
Subjt:  DILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNP

Query:  TGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMK
        T H+PELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDF+FFRHHRYIF+SKENKK ADSK  SKD KGEKVPQQKVIARLQECGPRFTMK
Subjt:  TGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMK

Query:  LISLQHGTFDSKGGEYEWVHKIE
        LISLQHGTFDSKGGEYEWVHK E
Subjt:  LISLQHGTFDSKGGEYEWVHKIE

SwissProt top hitse value%identityAlignment
Q5R631 Ribosome production factor 15.0e-6846.96Show/hide
Query:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLIT
        G   S IKNKE+R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   +   PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTGHQPELV
        T             +L +VIPN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTGHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SLFP +P F GR+V TFHNQRD+IFFR HRYIF S+  KKV                       +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHK
        FDSK GEYEWVHK
Subjt:  FDSKGGEYEWVHK

Q5RJS9 Ribosome production factor 16.6e-6847.77Show/hide
Query:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLIT
        G   S IKNK++R  +    K Q++ EK   AK +   E++A  LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   R   PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTGHQPELV
        T             +L +VIP++H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTGHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SLFP +P F GR+V TFHNQRD+IFFR HRYIF+S+  KKV                       +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHKI
        FDSK GEYEWVHK+
Subjt:  FDSKGGEYEWVHKI

Q6IQU6 Ribosome production factor 11.7e-6848.54Show/hide
Query:  SMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRF
        S IKNK++R  +   LK +K+ +KR   K +   E++AL+  ++ PP+++P+TIEN R  DET   P+DEE+      DEFS+   R   PKVLITT   
Subjt:  SMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRF

Query:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTGHQPELVLTNF
               F  +L +VIP+A+ Y R    LKK+I    ++ FT LMV++  R+  +G+++  LP+GPTAHFK+S+V LRK++K  G NPT H PE++L NF
Subjt:  NSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTGHQPELVLTNF

Query:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSK
        TTRLG  +GRL  +LFP DP F GR+V TFHNQRDFIFFR HRYIF  K  KKV                       +QE GPRFT+KL SLQ GTFDSK
Subjt:  TTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSK

Query:  GGEYEWVHK
         GEYEWVHK
Subjt:  GGEYEWVHK

Q8AVP1 Ribosome production factor 12.0e-6947.6Show/hide
Query:  SMIKNKEKRAEVHANLKNQKKLEK----RKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLIT
        S IKNK++R  +   LK +K+ EK    +KR K R+A       LG++ PP+ +P+TIEN R  DET   P DEE+      DEF+    +   PK+LIT
Subjt:  SMIKNKEKRAEVHANLKNQKKLEK----RKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTGHQPELV
        T          F  +L S+IPN+  Y R    LKKII    ++D+T L+V++  R+  +GL++  LP+GPTAHFKISNV LRK++K  G  PT H+PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTGHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SL+P DP+F GR+V TFHNQRD+IFFR+HRY+F+S+  KKV                       +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHK
        FDSK GEYEWVHK
Subjt:  FDSKGGEYEWVHK

Q9H9Y2 Ribosome production factor 11.1e-6746.65Show/hide
Query:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLIT
        G   S IKNK++R   H      K+ +++++  A+   +K+   LG++ PP+ +P+TI+N R  DET   P+DEE+      DEF+S   +   PK+LIT
Subjt:  GIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLIT

Query:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTGHQPELV
        T             +L +VIPN+H Y R    LKKII    A+DFT L+V++  R+  +GL++  LP GPTAHFK+S+V LRK+IK  G +PT H PE++
Subjt:  TCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHG-NPTGHQPELV

Query:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLISLQHGT
        L NFTTRLG  +GR+  SLFP +P F GR+V TFHNQRD+IFFR HRYIF S+  KKV                       +QE GPRFT+KL SLQ GT
Subjt:  LTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLISLQHGT

Query:  FDSKGGEYEWVHK
        FDSK GEYEWVHK
Subjt:  FDSKGGEYEWVHK

Arabidopsis top hitse value%identityAlignment
AT1G63780.1 Ribosomal RNA processing Brix domain protein1.3e-3434.67Show/hide
Query:  KQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEY
        ++AL+ G+ +P        +  +E+D    +  +  +   +  DE+++  + D  PK+L+TT R  S     F  EL  V PN+    RG+  + +IIE 
Subjt:  KQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEY

Query:  ANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQ
        A + DFT +++VH  R   DGL+I  LP GPTA+F + NVV R DI   K+ G      P L+  NFTT++G RVG +++ +FP  P    +R+VTF NQ
Subjt:  ANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDI---KNHGNPTGHQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQ

Query:  RDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSKGGEYEWV
         D+I FR+H Y                    KGE  P+      L+E GPRF ++L  ++ GT +    E EWV
Subjt:  RDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSKGGEYEWV

AT4G01560.1 Ribosomal RNA processing Brix domain protein3.3e-13172.59Show/hide
Query:  GEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDI
        G EK+N  I+PSMIKNK+KR++V+A  K++KKLEK+K+ +ARDAAEK+ALELGEE P + IP+TIENTRE DETVC+PDDEELFA  DADEF+ +++R+I
Subjt:  GEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDI

Query:  LPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTG
         PKVL+TTCRFNST GPA ISELLSVIPN+HY KRGT DLKKI+EYA  KDFTSL+VVHT+RR+ D LLIIGLP GPTAHFK+SN+VLRKDIKNHGNPT 
Subjt:  LPKVLITTCRFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTG

Query:  HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLI
        HQPELVL NFTTRLG RVGR  QSLFP DPNFRGRRVVTFHNQRDFIFFRHHRYIFE+KE             +K +K  ++ +  RLQECGPRFT+KL+
Subjt:  HQPELVLTNFTTRLGLRVGRLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLI

Query:  SLQHGTFDSKGGEYEWVHKIE
        +LQHGTFD+KGGE+EWVHK E
Subjt:  SLQHGTFDSKGGEYEWVHKIE


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGGGAGGAGAAGAAGAACAGGGGTATAATCCCATCAATGATAAAGAACAAAGAAAAGAGGGCAGAAGTGCACGCGAACCTCAAGAACCAGAAAAAGCTTGAGAAACG
CAAGAGGGCTAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAACTTCCTCCTAGGAAGATTCCTCGCACCATTGAGAACACCAGGGAGGTTGATG
AGACTGTTTGCAAACCTGACGATGAAGAGCTATTTGCTGGAAATGACGCAGATGAATTTAGTTCCATCATAAAGCGCGATATTTTACCGAAAGTTCTAATTACTACTTGT
CGTTTTAATTCTACGATTGGACCTGCTTTTATATCAGAATTGCTTTCGGTGATACCAAATGCACATTACTACAAGAGAGGAACTAATGATCTGAAGAAGATTATAGAATA
TGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTCCATACGAGTAGAAGAAAATTGGATGGACTTTTAATTATTGGCTTACCTGAGGGACCTACTGCCCATTTCAAGA
TTTCGAATGTTGTCTTACGTAAGGACATTAAGAATCATGGAAATCCAACCGGTCATCAGCCAGAACTTGTATTGACCAACTTCACAACACGCCTCGGTCTTCGTGTTGGA
AGATTAATACAATCTCTATTCCCTCAAGATCCCAATTTTCGCGGTCGGCGGGTTGTAACTTTTCATAACCAACGAGATTTTATATTTTTTCGGCATCACCGATACATTTT
TGAAAGCAAGGAAAATAAAAAAGTGGCAGACTCAAAAAAGAAGTCCAAGGATACCAAGGGTGAGAAAGTTCCTCAGCAGAAAGTGATTGCTCGTCTTCAGGAATGTGGTC
CTCGTTTCACAATGAAATTGATTAGCTTGCAACACGGGACTTTCGATTCAAAAGGCGGGGAATACGAATGGGTTCATAAGATTGAAGCTATAATAGTTGAATTGGAAATT
GACTCTCTATCTAGGTTTTCAATTTTTAGCTTGTTCCAAGCATTGTTTTGTGTCAATAATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGGGGAGGAGAAGAAGAACAGGGGTATAATCCCATCAATGATAAAGAACAAAGAAAAGAGGGCAGAAGTGCACGCGAACCTCAAGAACCAGAAAAAGCTTGAGAAACG
CAAGAGGGCTAAGGCTCGTGATGCTGCTGAGAAGCAAGCTCTTGAACTTGGAGAAGAACTTCCTCCTAGGAAGATTCCTCGCACCATTGAGAACACCAGGGAGGTTGATG
AGACTGTTTGCAAACCTGACGATGAAGAGCTATTTGCTGGAAATGACGCAGATGAATTTAGTTCCATCATAAAGCGCGATATTTTACCGAAAGTTCTAATTACTACTTGT
CGTTTTAATTCTACGATTGGACCTGCTTTTATATCAGAATTGCTTTCGGTGATACCAAATGCACATTACTACAAGAGAGGAACTAATGATCTGAAGAAGATTATAGAATA
TGCAAATGCCAAGGACTTCACTTCTTTGATGGTTGTCCATACGAGTAGAAGAAAATTGGATGGACTTTTAATTATTGGCTTACCTGAGGGACCTACTGCCCATTTCAAGA
TTTCGAATGTTGTCTTACGTAAGGACATTAAGAATCATGGAAATCCAACCGGTCATCAGCCAGAACTTGTATTGACCAACTTCACAACACGCCTCGGTCTTCGTGTTGGA
AGATTAATACAATCTCTATTCCCTCAAGATCCCAATTTTCGCGGTCGGCGGGTTGTAACTTTTCATAACCAACGAGATTTTATATTTTTTCGGCATCACCGATACATTTT
TGAAAGCAAGGAAAATAAAAAAGTGGCAGACTCAAAAAAGAAGTCCAAGGATACCAAGGGTGAGAAAGTTCCTCAGCAGAAAGTGATTGCTCGTCTTCAGGAATGTGGTC
CTCGTTTCACAATGAAATTGATTAGCTTGCAACACGGGACTTTCGATTCAAAAGGCGGGGAATACGAATGGGTTCATAAGATTGAAGCTATAATAGTTGAATTGGAAATT
GACTCTCTATCTAGGTTTTCAATTTTTAGCTTGTTCCAAGCATTGTTTTGTGTCAATAATTAA
Protein sequenceShow/hide protein sequence
MGEEKKNRGIIPSMIKNKEKRAEVHANLKNQKKLEKRKRAKARDAAEKQALELGEELPPRKIPRTIENTREVDETVCKPDDEELFAGNDADEFSSIIKRDILPKVLITTC
RFNSTIGPAFISELLSVIPNAHYYKRGTNDLKKIIEYANAKDFTSLMVVHTSRRKLDGLLIIGLPEGPTAHFKISNVVLRKDIKNHGNPTGHQPELVLTNFTTRLGLRVG
RLIQSLFPQDPNFRGRRVVTFHNQRDFIFFRHHRYIFESKENKKVADSKKKSKDTKGEKVPQQKVIARLQECGPRFTMKLISLQHGTFDSKGGEYEWVHKIEAIIVELEI
DSLSRFSIFSLFQALFCVNN