; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

PI0002360 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002360
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionBeta-galactosidase
Genome locationchr04:30421011..30421855
RNA-Seq ExpressionPI0002360
SyntenyPI0002360
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0025363.1 Beta-galactosidase [Cucumis melo var. makuwa]2.0e-4241.43Show/hide
Query:  MVSERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAVAVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL
        MVSE+  ++T +    ET+   E VAA                  A AAA+EK++Q LQK P   +    +     +   L HAP + GAW HAPP   +
Subjt:  MVSERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAVAVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL

Query:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------
        TAH   F  P  VQ SNPS + H HAP   S      +      ++  L V+P QQP FS                         E    SKNP      
Subjt:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------

Query:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST
                                        SIKMFLEGR QFGFLTGE   PPPG+  ERLW+ EDS IRSMLINSME QIGKPLLY AT KDLWD+T
Subjt:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST

Query:  QKLYSKRQNTSRLHTLRKQAH
        Q LYSKRQN SRL+TLRKQ H
Subjt:  QKLYSKRQNTSRLHTLRKQAH

KAA0061447.1 Beta-galactosidase [Cucumis melo var. makuwa]6.7e-4342.06Show/hide
Query:  MVSERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAVAVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL
        MVSE+  ++T +    ET+   E V A         AAA    A AV AA+EK++Q LQK P   +    +     +   L HAP + G W HAPP   +
Subjt:  MVSERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAVAVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL

Query:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------
        TAH   F  P  VQ SNPS + H HAP   S      +      ++  L V+P QQP FS                         E    SKNP      
Subjt:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------

Query:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST
                                        SIKMFLEGR QFGFLTGE   PPPG+  ERLW+ EDS IRSMLINSME QIGKPLLY AT KDLWD+T
Subjt:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST

Query:  QKLYSKRQNTSRLHTLRKQAH
        Q LYSKRQN SRL+TLRKQ H
Subjt:  QKLYSKRQNTSRLHTLRKQAH

TYK11240.1 Beta-galactosidase [Cucumis melo var. makuwa]1.4e-4343.3Show/hide
Query:  SERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAV--AVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL
        SE+  ++T +    ET+   + V AA      A AAA ++AAV  AVAAAMEK++Q LQK P   +    +         L HAP + GAW HAPP   +
Subjt:  SERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAV--AVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL

Query:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------
        TAH   F  P  VQ SNPS + H HAP   S      +      ++  L V+P QQP FS                         E    SKNP      
Subjt:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------

Query:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST
                                        SIKMFLEGR QFGFLTGEI  PPPG+  ERLW+ EDS IRSMLINSME QIGKPLLY  T KDLWD+T
Subjt:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST

Query:  QKLYSKRQNTSRLHTLRKQAH
        Q LYSKRQN SRL+TLRKQ H
Subjt:  QKLYSKRQNTSRLHTLRKQAH

TYK23439.1 Beta-galactosidase [Cucumis melo var. makuwa]6.1e-4443.3Show/hide
Query:  MVSERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAVAVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL
        MVSE+  ++T +    ET+   E VAAA      A AA D     AVAAA+EK++Q LQK P   +    +         L HAP + GAW HAPP   +
Subjt:  MVSERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAVAVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL

Query:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------
        TAH   F  P  VQ SNPS + H HAP   S      +      ++  L V+P QQP FS                         E    SKNP      
Subjt:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------

Query:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST
                                        SIKMFLEGR QFGFLTGEI  PPPG+  ERLW+ EDS IRSMLINSME QIGKPLLY  T KDLWD+T
Subjt:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST

Query:  QKLYSKRQNTSRLHTLRKQAH
        Q LYSKRQN SRL+TLRKQ H
Subjt:  QKLYSKRQNTSRLHTLRKQAH

TYK31050.1 Beta-galactosidase [Cucumis melo var. makuwa]5.7e-4240.81Show/hide
Query:  MVSERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAVAVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL
        MVSE+  ++T +    ET+   E +AA                    AAAMEK++Q LQK P   +    +     +     HAP + GAW HAPP   +
Subjt:  MVSERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAVAVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL

Query:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------
        TAH   F  P  VQ SNPS + H HAP   S      +      ++  L V+P QQP FS                         E    SKNP      
Subjt:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------

Query:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST
                                        SIKMFLEGR QFGFLTGEI  PPPG+  ERLW+ EDS IRSMLINSME QIGKPLLY  T KDLWD+T
Subjt:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST

Query:  QKLYSKRQNTSRLHTLRKQAH
        Q LYSKRQN SRL+TLRKQ H
Subjt:  QKLYSKRQNTSRLHTLRKQAH

TrEMBL top hitse value%identityAlignment
A0A5A7SL21 Beta-galactosidase9.5e-4341.43Show/hide
Query:  MVSERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAVAVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL
        MVSE+  ++T +    ET+   E VAA                  A AAA+EK++Q LQK P   +    +     +   L HAP + GAW HAPP   +
Subjt:  MVSERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAVAVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL

Query:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------
        TAH   F  P  VQ SNPS + H HAP   S      +      ++  L V+P QQP FS                         E    SKNP      
Subjt:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------

Query:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST
                                        SIKMFLEGR QFGFLTGE   PPPG+  ERLW+ EDS IRSMLINSME QIGKPLLY AT KDLWD+T
Subjt:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST

Query:  QKLYSKRQNTSRLHTLRKQAH
        Q LYSKRQN SRL+TLRKQ H
Subjt:  QKLYSKRQNTSRLHTLRKQAH

A0A5A7V3J5 Beta-galactosidase3.3e-4342.06Show/hide
Query:  MVSERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAVAVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL
        MVSE+  ++T +    ET+   E V A         AAA    A AV AA+EK++Q LQK P   +    +     +   L HAP + G W HAPP   +
Subjt:  MVSERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAVAVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL

Query:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------
        TAH   F  P  VQ SNPS + H HAP   S      +      ++  L V+P QQP FS                         E    SKNP      
Subjt:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------

Query:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST
                                        SIKMFLEGR QFGFLTGE   PPPG+  ERLW+ EDS IRSMLINSME QIGKPLLY AT KDLWD+T
Subjt:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST

Query:  QKLYSKRQNTSRLHTLRKQAH
        Q LYSKRQN SRL+TLRKQ H
Subjt:  QKLYSKRQNTSRLHTLRKQAH

A0A5D3CIR0 Beta-galactosidase6.6e-4443.3Show/hide
Query:  SERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAV--AVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL
        SE+  ++T +    ET+   + V AA      A AAA ++AAV  AVAAAMEK++Q LQK P   +    +         L HAP + GAW HAPP   +
Subjt:  SERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAV--AVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL

Query:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------
        TAH   F  P  VQ SNPS + H HAP   S      +      ++  L V+P QQP FS                         E    SKNP      
Subjt:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------

Query:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST
                                        SIKMFLEGR QFGFLTGEI  PPPG+  ERLW+ EDS IRSMLINSME QIGKPLLY  T KDLWD+T
Subjt:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST

Query:  QKLYSKRQNTSRLHTLRKQAH
        Q LYSKRQN SRL+TLRKQ H
Subjt:  QKLYSKRQNTSRLHTLRKQAH

A0A5D3DJM7 Beta-galactosidase3.0e-4443.3Show/hide
Query:  MVSERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAVAVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL
        MVSE+  ++T +    ET+   E VAAA      A AA D     AVAAA+EK++Q LQK P   +    +         L HAP + GAW HAPP   +
Subjt:  MVSERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAVAVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL

Query:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------
        TAH   F  P  VQ SNPS + H HAP   S      +      ++  L V+P QQP FS                         E    SKNP      
Subjt:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------

Query:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST
                                        SIKMFLEGR QFGFLTGEI  PPPG+  ERLW+ EDS IRSMLINSME QIGKPLLY  T KDLWD+T
Subjt:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST

Query:  QKLYSKRQNTSRLHTLRKQAH
        Q LYSKRQN SRL+TLRKQ H
Subjt:  QKLYSKRQNTSRLHTLRKQAH

A0A5D3E603 Beta-galactosidase2.8e-4240.81Show/hide
Query:  MVSERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAVAVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL
        MVSE+  ++T +    ET+   E +AA                    AAAMEK++Q LQK P   +    +     +     HAP + GAW HAPP   +
Subjt:  MVSERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAVAVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSL

Query:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------
        TAH   F  P  VQ SNPS + H HAP   S      +      ++  L V+P QQP FS                         E    SKNP      
Subjt:  TAHTNGFALPPPVQLSNPSANTHTHAPPLPSDHGGPPI----PTTQLPLSVNPSQQPYFS-------------------------ETSAQSKNP------

Query:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST
                                        SIKMFLEGR QFGFLTGEI  PPPG+  ERLW+ EDS IRSMLINSME QIGKPLLY  T KDLWD+T
Subjt:  --------------------------------SIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDST

Query:  QKLYSKRQNTSRLHTLRKQAH
        Q LYSKRQN SRL+TLRKQ H
Subjt:  QKLYSKRQNTSRLHTLRKQAH

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G21280.1 CONTAINS InterPro DOMAIN/s: Retrotransposon gag protein (InterPro:IPR005162); Has 707 Blast hits to 705 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 703; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).7.8e-0524.29Show/hide
Query:  KMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDSTQKLY
        + FL   ++FGF+ G +P P P +   + W   ++ +   L+NSM  ++ + ++Y  T   +W+  ++++
Subjt:  KMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPLLYVATTKDLWDSTQKLY


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTATCAGAGCGGGGTAAACATAAAACCCAAGACACCGAATATGAGGAAACCAGAGCTAACCACGAGTACGTTGCCGCCGCTGATATGAATGCCGCCGTTGCCGTTGC
CGCCGCTGATATGAATGCCGCCGTTGCCGTTGCCGCCGCCATGGAAAAGGTGGTCCAGAAGCTTCAGAAGATGCCGGCGGCCACGTCTGCCACCTCCGCAGAGTCGTCCG
GTCAACACAACGCCGTAGATCTGCATCACGCGCCGCCGCTGCAGGGCGCGTGGACCCACGCGCCGCCGTCTGTGAGTCTCACCGCCCATACGAATGGCTTCGCCTTGCCG
CCGCCAGTCCAACTGTCAAACCCTTCTGCCAATACGCACACTCACGCGCCGCCGCTGCCCTCCGACCATGGAGGGCCGCCTATTCCGACCACCCAGCTGCCGCTGTCTGT
TAATCCTTCACAGCAGCCTTACTTCAGCGAGACCTCGGCGCAATCCAAGAACCCGTCGATCAAGATGTTTCTTGAGGGACGCCAACAATTTGGGTTTCTGACTGGTGAGA
TTCCCTGTCCTCCACCTGGCAATGATCAAGAACGCCTTTGGAGAGCAGAGGACTCCTTTATTCGGTCCATGCTAATCAATAGTATGGAATCTCAAATAGGCAAGCCGCTC
TTATACGTTGCTACAACAAAGGATCTCTGGGACTCCACTCAGAAACTCTACTCGAAACGTCAGAATACTTCCCGTCTTCATACCTTGAGAAAACAAGCCCATACAAACTA
A
mRNA sequenceShow/hide mRNA sequence
ATGGTATCAGAGCGGGGTAAACATAAAACCCAAGACACCGAATATGAGGAAACCAGAGCTAACCACGAGTACGTTGCCGCCGCTGATATGAATGCCGCCGTTGCCGTTGC
CGCCGCTGATATGAATGCCGCCGTTGCCGTTGCCGCCGCCATGGAAAAGGTGGTCCAGAAGCTTCAGAAGATGCCGGCGGCCACGTCTGCCACCTCCGCAGAGTCGTCCG
GTCAACACAACGCCGTAGATCTGCATCACGCGCCGCCGCTGCAGGGCGCGTGGACCCACGCGCCGCCGTCTGTGAGTCTCACCGCCCATACGAATGGCTTCGCCTTGCCG
CCGCCAGTCCAACTGTCAAACCCTTCTGCCAATACGCACACTCACGCGCCGCCGCTGCCCTCCGACCATGGAGGGCCGCCTATTCCGACCACCCAGCTGCCGCTGTCTGT
TAATCCTTCACAGCAGCCTTACTTCAGCGAGACCTCGGCGCAATCCAAGAACCCGTCGATCAAGATGTTTCTTGAGGGACGCCAACAATTTGGGTTTCTGACTGGTGAGA
TTCCCTGTCCTCCACCTGGCAATGATCAAGAACGCCTTTGGAGAGCAGAGGACTCCTTTATTCGGTCCATGCTAATCAATAGTATGGAATCTCAAATAGGCAAGCCGCTC
TTATACGTTGCTACAACAAAGGATCTCTGGGACTCCACTCAGAAACTCTACTCGAAACGTCAGAATACTTCCCGTCTTCATACCTTGAGAAAACAAGCCCATACAAACTA
A
Protein sequenceShow/hide protein sequence
MVSERGKHKTQDTEYEETRANHEYVAAADMNAAVAVAAADMNAAVAVAAAMEKVVQKLQKMPAATSATSAESSGQHNAVDLHHAPPLQGAWTHAPPSVSLTAHTNGFALP
PPVQLSNPSANTHTHAPPLPSDHGGPPIPTTQLPLSVNPSQQPYFSETSAQSKNPSIKMFLEGRQQFGFLTGEIPCPPPGNDQERLWRAEDSFIRSMLINSMESQIGKPL
LYVATTKDLWDSTQKLYSKRQNTSRLHTLRKQAHTN