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PI0002375 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002375
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionProtein Ycf2-like
Genome locationchr03:23080815..23082533
RNA-Seq ExpressionPI0002375
SyntenyPI0002375
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0047596.1 protein Ycf2-like [Cucumis melo var. makuwa]2.6e-0948.57Show/hide
Query:  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETL-SSSDERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEE
        MKK +GE +TR SD L+ AGITGS+      ++ L SSS+ER +D M EGSG K  SP++SKKR + E  KEE  V+KK RIKSLV +++  R   ++++
Subjt:  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETL-SSSDERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEE

Query:  EEQKK
        E + K
Subjt:  EEQKK

KAA0050200.1 protein Ycf2-like [Cucumis melo var. makuwa]2.0e-0949.53Show/hide
Query:  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETLSSS-DERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVD-KRQFVRRTHEEE
        MKKEKGE +TR SD L+  GITGS+      ++ LSSS +ER +D M EGSG K  SP +SKKR + E  KEE  V+KK RIK+L D + +   + HEEE
Subjt:  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETLSSS-DERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVD-KRQFVRRTHEEE

Query:  EEEQKKK
        E ++ ++
Subjt:  EEEQKKK

KAA0067175.1 protein Ycf2-like [Cucumis melo var. makuwa]2.0e-0948.57Show/hide
Query:  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETL-SSSDERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEE
        MKK +GE +TR SD L+ AGITGS+      ++ L SSS+ER +D M EGSG K  SP +SKKR + E  KEE+ V+KK RIKSLV +++  R   ++++
Subjt:  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETL-SSSDERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEE

Query:  EEQKK
        E + K
Subjt:  EEQKK

KAE8637398.1 hypothetical protein CSA_023375 [Cucumis sativus]1.0e-1359.41Show/hide
Query:  MKKEKGEGRTRPSD-ILKVAGITGSKNPSTKEVETLSSSDERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEE
        MKKEKGEGRTR S+ +L++  +   KN   +          R +D MVEGS SKHGSPKSSKK+G+N  PKEE VVKKK RIKSLV KR+FVR T EEE+
Subjt:  MKKEKGEGRTRPSD-ILKVAGITGSKNPSTKEVETLSSSDERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEE

Query:  E
        E
Subjt:  E

TYJ98210.1 protein Ycf2-like [Cucumis melo var. makuwa]2.0e-0949.53Show/hide
Query:  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETLSSS-DERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVD-KRQFVRRTHEEE
        MKKEKGE +TR SD L+  GITGS+      ++ LSSS +ER +D M EGSG K  SP +SKKR + E  KEE  V+KK RIK+L D + +   + HEEE
Subjt:  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETLSSS-DERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVD-KRQFVRRTHEEE

Query:  EEEQKKK
        E ++ ++
Subjt:  EEEQKKK

TrEMBL top hitse value%identityAlignment
A0A5A7U047 Protein Ycf2-like1.3e-0948.57Show/hide
Query:  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETL-SSSDERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEE
        MKK +GE +TR SD L+ AGITGS+      ++ L SSS+ER +D M EGSG K  SP++SKKR + E  KEE  V+KK RIKSLV +++  R   ++++
Subjt:  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETL-SSSDERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEE

Query:  EEQKK
        E + K
Subjt:  EEQKK

A0A5A7U4J7 Protein Ycf2-like9.6e-1049.53Show/hide
Query:  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETLSSS-DERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVD-KRQFVRRTHEEE
        MKKEKGE +TR SD L+  GITGS+      ++ LSSS +ER +D M EGSG K  SP +SKKR + E  KEE  V+KK RIK+L D + +   + HEEE
Subjt:  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETLSSS-DERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVD-KRQFVRRTHEEE

Query:  EEEQKKK
        E ++ ++
Subjt:  EEEQKKK

A0A5A7VN68 Protein Ycf2-like9.6e-1048.57Show/hide
Query:  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETL-SSSDERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEE
        MKK +GE +TR SD L+ AGITGS+      ++ L SSS+ER +D M EGSG K  SP +SKKR + E  KEE+ V+KK RIKSLV +++  R   ++++
Subjt:  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETL-SSSDERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEE

Query:  EEQKK
        E + K
Subjt:  EEQKK

A0A5D3BEG7 Protein Ycf2-like9.6e-1049.53Show/hide
Query:  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETLSSS-DERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVD-KRQFVRRTHEEE
        MKKEKGE +TR SD L+  GITGS+      ++ LSSS +ER +D M EGSG K  SP +SKKR + E  KEE  V+KK RIK+L D + +   + HEEE
Subjt:  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETLSSS-DERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVD-KRQFVRRTHEEE

Query:  EEEQKKK
        E ++ ++
Subjt:  EEEQKKK

A0A5D3DR12 Protein Ycf2-like2.1e-0948.57Show/hide
Query:  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETL-SSSDERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEE
        MKK +GE +TR SD L+ AGITGS+      ++ L SSS+ER +D M EGSG K  SP +SKKR + E  KEE  V+KK RIKSLV +++  R   ++++
Subjt:  MKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETL-SSSDERKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEE

Query:  EEQKK
        E + K
Subjt:  EEQKK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCCAACTTCTTCATCAAAACGAGTCCAGCTTCATTTGTCTTCTGCAGGTTCAAACGAATTTGGTCAACTGCTCTTTGCTTCATTCGTCTTCTGCATGTTTTTGCT
TCTTCTAGAGGAGCTTCAAACCCTTCGAAACCTTCTTCATCAAAACGAGTCCAGCTTTGTCCTCTACAGAAAAAAGAGGAAGAAGAGCTGTTTCCAAAATATGAAAAAGG
AGAAGGGAGAAGGAAGAACAAGACCAAGTGACATATTAAAAGTTGCTGGAATTACTGGTTCCAAAAACCCATCAACAAAAGAAGTTGAAACTCTGTCAAGTTCGGACGAG
AGAAAAAAAGATCAAATGGTTGAGGGCTCTGGAAGCAAGCATGGAAGTCCTAAATCTTCCAAGAAGAGGGGAAAGAATGAACTCCCAAAGGAAGAGAATGTTGTAAAGAA
AAAACCGAGGATCAAAAGCTTGGTTGACAAAAGGCAATTTGTGAGACGAACACATGAAGAAGAAGAGGAAGAACAAAAGAAGAAGAGAAGGGCCCTCTCGTTTACCGTGC
ACTTCATCTTCTCCCCTTCTCCATCCCACACAAACCCTAGCGCCGCCGCCCTTTACCGCCGACCACCGTGCCTCCCGGACGCCACTTGCAGACGAAGCCGAGCCGAGGAG
CCACGTGAGCCAGTCGTCTGTGCTGTTCTTCTTCACGCGAGTCGTTCCGAGCCGAGGAGCCCACGCGAGCCAGCCACCCCGAGCCTGTGCAAGCCGCACTGCTGTTCGGC
CTTCTTCACGCAAAACGTCTCGAGCTCGTGCGAGTCGCGCTGTCGTCTGCCATCCTTCACGCGAGAAGAAACTGCACCGCCGTCTGCTATTCTTCACGCGAGCCATCCGC
CTGCCGTCCAAGCCGCGCCGCCGTCCATCCTCTAG
mRNA sequenceShow/hide mRNA sequence
ATGAGTCCAACTTCTTCATCAAAACGAGTCCAGCTTCATTTGTCTTCTGCAGGTTCAAACGAATTTGGTCAACTGCTCTTTGCTTCATTCGTCTTCTGCATGTTTTTGCT
TCTTCTAGAGGAGCTTCAAACCCTTCGAAACCTTCTTCATCAAAACGAGTCCAGCTTTGTCCTCTACAGAAAAAAGAGGAAGAAGAGCTGTTTCCAAAATATGAAAAAGG
AGAAGGGAGAAGGAAGAACAAGACCAAGTGACATATTAAAAGTTGCTGGAATTACTGGTTCCAAAAACCCATCAACAAAAGAAGTTGAAACTCTGTCAAGTTCGGACGAG
AGAAAAAAAGATCAAATGGTTGAGGGCTCTGGAAGCAAGCATGGAAGTCCTAAATCTTCCAAGAAGAGGGGAAAGAATGAACTCCCAAAGGAAGAGAATGTTGTAAAGAA
AAAACCGAGGATCAAAAGCTTGGTTGACAAAAGGCAATTTGTGAGACGAACACATGAAGAAGAAGAGGAAGAACAAAAGAAGAAGAGAAGGGCCCTCTCGTTTACCGTGC
ACTTCATCTTCTCCCCTTCTCCATCCCACACAAACCCTAGCGCCGCCGCCCTTTACCGCCGACCACCGTGCCTCCCGGACGCCACTTGCAGACGAAGCCGAGCCGAGGAG
CCACGTGAGCCAGTCGTCTGTGCTGTTCTTCTTCACGCGAGTCGTTCCGAGCCGAGGAGCCCACGCGAGCCAGCCACCCCGAGCCTGTGCAAGCCGCACTGCTGTTCGGC
CTTCTTCACGCAAAACGTCTCGAGCTCGTGCGAGTCGCGCTGTCGTCTGCCATCCTTCACGCGAGAAGAAACTGCACCGCCGTCTGCTATTCTTCACGCGAGCCATCCGC
CTGCCGTCCAAGCCGCGCCGCCGTCCATCCTCTAG
Protein sequenceShow/hide protein sequence
MSPTSSSKRVQLHLSSAGSNEFGQLLFASFVFCMFLLLLEELQTLRNLLHQNESSFVLYRKKRKKSCFQNMKKEKGEGRTRPSDILKVAGITGSKNPSTKEVETLSSSDE
RKKDQMVEGSGSKHGSPKSSKKRGKNELPKEENVVKKKPRIKSLVDKRQFVRRTHEEEEEEQKKKRRALSFTVHFIFSPSPSHTNPSAAALYRRPPCLPDATCRRSRAEE
PREPVVCAVLLHASRSEPRSPREPATPSLCKPHCCSAFFTQNVSSSCESRCRLPSFTREETAPPSAILHASHPPAVQAAPPSIL