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PI0002498 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002498
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotransposon protein
Genome locationchr11:15002532..15002696
RNA-Seq ExpressionPI0002498
SyntenyPI0002498
Gene Ontology termsGO:0046872 - metal ion binding (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042272.1 retrotransposon protein [Cucumis melo var. makuwa]9.0e-1475.47Show/hide
Query:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN DI D++DE DST+ATTD +DIHYIETSS W+QWRD+LAE+MF+DWELRN
Subjt:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRN

KAA0054126.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]9.0e-1474.07Show/hide
Query:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRNQ
        MTN DI D++DE DST+ATT  +DIHYIETS+ WSQWRD+LAE+MF+DWELRNQ
Subjt:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRNQ

KAA0067470.1 retrotransposon protein [Cucumis melo var. makuwa]3.1e-1475.93Show/hide
Query:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRNQ
        MTN DI D++DE DST+ATT  +DIHYIETS+ WSQWRD+LAE+MFSDWELRNQ
Subjt:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRNQ

TYJ99699.1 putative nuclease HARBI1 [Cucumis melo var. makuwa]3.1e-1475.93Show/hide
Query:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRNQ
        MTN DI D++DE DST+ATT  +DIHYIETS+ WSQWRD+LAE+MFSDWELRNQ
Subjt:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRNQ

TYK26917.1 retrotransposon protein [Cucumis melo var. makuwa]2.4e-1475.93Show/hide
Query:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRNQ
        MTN DI D++DE DST+ATTD +DIHYIETSS W+QWRD+LAE+MF+DWELRNQ
Subjt:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRNQ

TrEMBL top hitse value%identityAlignment
A0A5A7TFS1 Retrotransposon protein4.4e-1475.47Show/hide
Query:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRN
        MTN DI D++DE DST+ATTD +DIHYIETSS W+QWRD+LAE+MF+DWELRN
Subjt:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRN

A0A5A7UIM7 Putative nuclease HARBI14.4e-1474.07Show/hide
Query:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRNQ
        MTN DI D++DE DST+ATT  +DIHYIETS+ WSQWRD+LAE+MF+DWELRNQ
Subjt:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRNQ

A0A5A7VJX3 Retrotransposon protein1.5e-1475.93Show/hide
Query:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRNQ
        MTN DI D++DE DST+ATT  +DIHYIETS+ WSQWRD+LAE+MFSDWELRNQ
Subjt:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRNQ

A0A5D3BL48 Putative nuclease HARBI11.5e-1475.93Show/hide
Query:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRNQ
        MTN DI D++DE DST+ATT  +DIHYIETS+ WSQWRD+LAE+MFSDWELRNQ
Subjt:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRNQ

A0A5D3DT17 Retrotransposon protein1.1e-1475.93Show/hide
Query:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRNQ
        MTN DI D++DE DST+ATTD +DIHYIETSS W+QWRD+LAE+MF+DWELRNQ
Subjt:  MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRNQ

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGAACAATGACATACCAGATGACGTTGATGAGGGTGACTCTACATATGCCACCACTGACGGTGAAGATATTCATTACATAGAGACCTCGAGTGCATGGAGTCAATG
GAGGGACGAGCTTGCCGAAAAAATGTTCAGTGATTGGGAGTTGCGTAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGACGAACAATGACATACCAGATGACGTTGATGAGGGTGACTCTACATATGCCACCACTGACGGTGAAGATATTCATTACATAGAGACCTCGAGTGCATGGAGTCAATG
GAGGGACGAGCTTGCCGAAAAAATGTTCAGTGATTGGGAGTTGCGTAATCAGTAA
Protein sequenceShow/hide protein sequence
MTNNDIPDDVDEGDSTYATTDGEDIHYIETSSAWSQWRDELAEKMFSDWELRNQ