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PI0002499 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002499
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionGag/pol protein
Genome locationchr06:17551254..17552834
RNA-Seq ExpressionPI0002499
SyntenyPI0002499
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0031701.1 hypothetical protein E6C27_scaffold139G004850 [Cucumis melo var. makuwa]1.6e-2945.25Show/hide
Query:  IAEELKDELEAMSPIDQESPPRKPREVAGPSKGKKKIGRSGPEERPSGDEAITKTPSI----NSLIKAFGWKQFFKGHTKLRLGVVEKFYAAKLNANEFS
        +AEELK E+EAMS   QE   + P          ++ GR  P       EA +  P +     ++ +AFGW++FFKG +K+RL VV KFYA+  N  E+ 
Subjt:  IAEELKDELEAMSPIDQESPPRKPREVAGPSKGKKKIGRSGPEERPSGDEAITKTPSI----NSLIKAFGWKQFFKGHTKLRLGVVEKFYAAKLNANEFS

Query:  VEISGKIVSFNAEAINELYDLPNDAETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTGKYQLYPHQLTTEASVWLF
          +  K   FN EAIN+LY+ P DAETP  + + ++ +R A +ALE I W G  + +TPTGKY LYPHQLT EASVWLF
Subjt:  VEISGKIVSFNAEAINELYDLPNDAETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTGKYQLYPHQLTTEASVWLF

KAA0041264.1 hypothetical protein E6C27_scaffold128G002490 [Cucumis melo var. makuwa]1.9e-3041.62Show/hide
Query:  LRLGVVEKFYAAKLNANEFSVEISGKIVSFNAEAINELYDLPNDAETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTGKYQLYPHQLTTEASVWLFF
        +R  VV  FY A +N  E   E+  K V F  +AIN LY L N+    G +   +   R  + ALE I+WPGT W   PT KYQL+P+ L TE SVWL F
Subjt:  LRLGVVEKFYAAKLNANEFSVEISGKIVSFNAEAINELYDLPNDAETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTGKYQLYPHQLTTEASVWLFF

Query:  IKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRAPKGAMSFPSTIEALCIKVVPFLYAMNSVPIPSGLCNQMALNRMITFHGHK
        IKK I PTRHDSTI++E  MLLY        N  ++    +++W++ P GA  F    + L IK  P L     V + +G+C    L+R IT H +K
Subjt:  IKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRAPKGAMSFPSTIEALCIKVVPFLYAMNSVPIPSGLCNQMALNRMITFHGHK

KAA0049609.1 transposase [Cucumis melo var. makuwa]3.6e-3456.52Show/hide
Query:  VSFNAEAINELYDLPND-AETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIM
        V F  E INELYDLPND    PGQ  +V      A+K +++IVWP      TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI 
Subjt:  VSFNAEAINELYDLPND-AETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIM

Query:  TKKHVNLGDLIATSILSWMRAPKGAMSFPSTIEALCIK
         KK  NLG ++  + LSWMR PK A  FP+T++ LC+K
Subjt:  TKKHVNLGDLIATSILSWMRAPKGAMSFPSTIEALCIK

KAA0062900.1 gag/pol protein [Cucumis melo var. makuwa]1.8e-4150.28Show/hide
Query:  KLRLGVVEKFYAAKLNANEFSVEISGKIVSFNAEAINELYDLPNDAETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTG-KYQLYPHQLTTEASVWL
        K+R+ VV KFY  K N ++  + I  +   FN E INELY+ PNDAE  GQ  V  ST+ +A++AL+V+ WPG   +V P   +YQLYPH LTT+A+VW+
Subjt:  KLRLGVVEKFYAAKLNANEFSVEISGKIVSFNAEAINELYDLPNDAETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTG-KYQLYPHQLTTEASVWL

Query:  FFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRAPKGAMSFPSTIEALCIKVVPFLYAMNSVPIPS
        FF K KIFPT +DSTI+++  ++LYCIM KK +NL ++I  +IL+WM  PK AM FPS +E LC+K +P L       IPS
Subjt:  FFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRAPKGAMSFPSTIEALCIKVVPFLYAMNSVPIPS

TYK15967.1 hypothetical protein E5676_scaffold94G00870 [Cucumis melo var. makuwa]3.6e-3456.52Show/hide
Query:  VSFNAEAINELYDLPND-AETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIM
        V F  E INELYDLPND    PGQ  +V      A+K +++IVWP      TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI 
Subjt:  VSFNAEAINELYDLPND-AETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIM

Query:  TKKHVNLGDLIATSILSWMRAPKGAMSFPSTIEALCIK
         KK  NLG ++  + LSWMR PK A  FP+T++ LC+K
Subjt:  TKKHVNLGDLIATSILSWMRAPKGAMSFPSTIEALCIK

TrEMBL top hitse value%identityAlignment
A0A5A7SQ81 Uncharacterized protein7.7e-3045.25Show/hide
Query:  IAEELKDELEAMSPIDQESPPRKPREVAGPSKGKKKIGRSGPEERPSGDEAITKTPSI----NSLIKAFGWKQFFKGHTKLRLGVVEKFYAAKLNANEFS
        +AEELK E+EAMS   QE   + P          ++ GR  P       EA +  P +     ++ +AFGW++FFKG +K+RL VV KFYA+  N  E+ 
Subjt:  IAEELKDELEAMSPIDQESPPRKPREVAGPSKGKKKIGRSGPEERPSGDEAITKTPSI----NSLIKAFGWKQFFKGHTKLRLGVVEKFYAAKLNANEFS

Query:  VEISGKIVSFNAEAINELYDLPNDAETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTGKYQLYPHQLTTEASVWLF
          +  K   FN EAIN+LY+ P DAETP  + + ++ +R A +ALE I W G  + +TPTGKY LYPHQLT EASVWLF
Subjt:  VEISGKIVSFNAEAINELYDLPNDAETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTGKYQLYPHQLTTEASVWLF

A0A5A7U806 Transposase1.8e-3456.52Show/hide
Query:  VSFNAEAINELYDLPND-AETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIM
        V F  E INELYDLPND    PGQ  +V      A+K +++IVWP      TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI 
Subjt:  VSFNAEAINELYDLPND-AETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIM

Query:  TKKHVNLGDLIATSILSWMRAPKGAMSFPSTIEALCIK
         KK  NLG ++  + LSWMR PK A  FP+T++ LC+K
Subjt:  TKKHVNLGDLIATSILSWMRAPKGAMSFPSTIEALCIK

A0A5A7V6M5 Gag/pol protein8.7e-4250.28Show/hide
Query:  KLRLGVVEKFYAAKLNANEFSVEISGKIVSFNAEAINELYDLPNDAETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTG-KYQLYPHQLTTEASVWL
        K+R+ VV KFY  K N ++  + I  +   FN E INELY+ PNDAE  GQ  V  ST+ +A++AL+V+ WPG   +V P   +YQLYPH LTT+A+VW+
Subjt:  KLRLGVVEKFYAAKLNANEFSVEISGKIVSFNAEAINELYDLPNDAETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTG-KYQLYPHQLTTEASVWL

Query:  FFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRAPKGAMSFPSTIEALCIKVVPFLYAMNSVPIPS
        FF K KIFPT +DSTI+++  ++LYCIM KK +NL ++I  +IL+WM  PK AM FPS +E LC+K +P L       IPS
Subjt:  FFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRAPKGAMSFPSTIEALCIKVVPFLYAMNSVPIPS

A0A5D3CVL7 Uncharacterized protein1.8e-3456.52Show/hide
Query:  VSFNAEAINELYDLPND-AETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIM
        V F  E INELYDLPND    PGQ  +V      A+K +++IVWP      TPT + QL+PHQLT EA+VWLFFIKKKIFPT HDSTI  E A++LYCI 
Subjt:  VSFNAEAINELYDLPND-AETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTGKYQLYPHQLTTEASVWLFFIKKKIFPTRHDSTINLESAMLLYCIM

Query:  TKKHVNLGDLIATSILSWMRAPKGAMSFPSTIEALCIK
         KK  NLG ++  + LSWMR PK A  FP+T++ LC+K
Subjt:  TKKHVNLGDLIATSILSWMRAPKGAMSFPSTIEALCIK

A0A5D3CW17 Uncharacterized protein9.0e-3141.62Show/hide
Query:  LRLGVVEKFYAAKLNANEFSVEISGKIVSFNAEAINELYDLPNDAETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTGKYQLYPHQLTTEASVWLFF
        +R  VV  FY A +N  E   E+  K V F  +AIN LY L N+    G +   +   R  + ALE I+WPGT W   PT KYQL+P+ L TE SVWL F
Subjt:  LRLGVVEKFYAAKLNANEFSVEISGKIVSFNAEAINELYDLPNDAETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTGKYQLYPHQLTTEASVWLFF

Query:  IKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRAPKGAMSFPSTIEALCIKVVPFLYAMNSVPIPSGLCNQMALNRMITFHGHK
        IKK I PTRHDSTI++E  MLLY        N  ++    +++W++ P GA  F    + L IK  P L     V + +G+C    L+R IT H +K
Subjt:  IKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRAPKGAMSFPSTIEALCIKVVPFLYAMNSVPIPSGLCNQMALNRMITFHGHK

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGGATCTTCAAGCAAGCATCAAGATCATATCAGAGTGCGTTCTGATGGTCCTGAATTAGAACGACCTATATCGCGAGGAAAAGTGGAGGTTGAAAATCTTGATAA
GGATGCCGTTCTTGATTTTCTCAACGAACGGCTGAGAAAGCAGAAAGAAGCACACCTGAAGAGGACAAAGGAAGCTCGTCGCAGGAAGGACGAGCGCGAGCGTCTGAGAT
TTGAGGAACATCAAAAGGCTAAGAGTACGCTAGAAATACGCTCACCGCCTAACGAGGTTGCGGAGCTTCACAAGAAAATATCCGACAAGCTCGCTCAAGTCTCATTCGCC
AAAACGAGAAAAACAATAGAGGCGGTTAAGTCCACCTTGAAAAGGAAGGAAGAAAAGAAGAAGATGTTTGCGGACCTGAGCGAGCAAGTGGCGGAGCTCCCCACGAAGAT
GAAAACATTGGAGCCTGAGAGAAACCTCGAGGTTATTGCTGAAGAACTCAAGGACGAGCTAGAGGCGATGAGCCCAATTGATCAAGAGTCACCGCCAAGAAAACCAAGGG
AGGTCGCCGGACCATCCAAAGGAAAGAAAAAGATTGGGCGTTCTGGACCTGAGGAGCGTCCATCAGGCGACGAAGCCATTACAAAAACACCCTCCATCAACTCCCTCATC
AAGGCATTCGGATGGAAGCAATTTTTCAAGGGGCACACTAAGTTGAGATTGGGGGTGGTGGAAAAATTTTATGCGGCTAAACTCAATGCTAACGAGTTTAGCGTGGAAAT
CAGTGGCAAGATAGTAAGCTTCAACGCGGAGGCCATCAACGAGTTATACGATCTGCCCAACGATGCTGAAACGCCTGGACAAATATACGTGGTTAGCTCCACAAGAAGAA
TGGCCCGTAAAGCGTTGGAGGTAATCGTTTGGCCTGGGACCACATGGAAAGTAACGCCAACAGGGAAGTATCAACTCTATCCACACCAGCTAACCACAGAGGCGAGCGTG
TGGCTTTTCTTCATAAAAAAGAAGATCTTCCCTACGCGCCATGATAGCACCATTAACCTAGAGTCAGCAATGCTACTCTATTGTATAATGACGAAGAAGCACGTCAACCT
TGGCGATCTGATAGCTACATCCATTCTATCCTGGATGCGAGCTCCTAAGGGCGCCATGTCCTTTCCATCTACCATTGAAGCCCTCTGCATTAAGGTCGTACCGTTCCTCT
ACGCCATGAACTCAGTCCCAATTCCAAGCGGTTTGTGTAACCAAATGGCTTTGAATCGCATGATAACTTTCCATGGCCACAAAGAAATGGAAAGGCGAGCAAAGACATTA
GGCGACACAACTGAAGGTGTGGCCCAAGTAGAACGCAAGAGGAAGTCCTCAGCCGTCGCATCAACCCCTCCACCAAAAGTAAAAAAACAAGGGTTGATGTAG
mRNA sequenceShow/hide mRNA sequence
ATGGCCGGATCTTCAAGCAAGCATCAAGATCATATCAGAGTGCGTTCTGATGGTCCTGAATTAGAACGACCTATATCGCGAGGAAAAGTGGAGGTTGAAAATCTTGATAA
GGATGCCGTTCTTGATTTTCTCAACGAACGGCTGAGAAAGCAGAAAGAAGCACACCTGAAGAGGACAAAGGAAGCTCGTCGCAGGAAGGACGAGCGCGAGCGTCTGAGAT
TTGAGGAACATCAAAAGGCTAAGAGTACGCTAGAAATACGCTCACCGCCTAACGAGGTTGCGGAGCTTCACAAGAAAATATCCGACAAGCTCGCTCAAGTCTCATTCGCC
AAAACGAGAAAAACAATAGAGGCGGTTAAGTCCACCTTGAAAAGGAAGGAAGAAAAGAAGAAGATGTTTGCGGACCTGAGCGAGCAAGTGGCGGAGCTCCCCACGAAGAT
GAAAACATTGGAGCCTGAGAGAAACCTCGAGGTTATTGCTGAAGAACTCAAGGACGAGCTAGAGGCGATGAGCCCAATTGATCAAGAGTCACCGCCAAGAAAACCAAGGG
AGGTCGCCGGACCATCCAAAGGAAAGAAAAAGATTGGGCGTTCTGGACCTGAGGAGCGTCCATCAGGCGACGAAGCCATTACAAAAACACCCTCCATCAACTCCCTCATC
AAGGCATTCGGATGGAAGCAATTTTTCAAGGGGCACACTAAGTTGAGATTGGGGGTGGTGGAAAAATTTTATGCGGCTAAACTCAATGCTAACGAGTTTAGCGTGGAAAT
CAGTGGCAAGATAGTAAGCTTCAACGCGGAGGCCATCAACGAGTTATACGATCTGCCCAACGATGCTGAAACGCCTGGACAAATATACGTGGTTAGCTCCACAAGAAGAA
TGGCCCGTAAAGCGTTGGAGGTAATCGTTTGGCCTGGGACCACATGGAAAGTAACGCCAACAGGGAAGTATCAACTCTATCCACACCAGCTAACCACAGAGGCGAGCGTG
TGGCTTTTCTTCATAAAAAAGAAGATCTTCCCTACGCGCCATGATAGCACCATTAACCTAGAGTCAGCAATGCTACTCTATTGTATAATGACGAAGAAGCACGTCAACCT
TGGCGATCTGATAGCTACATCCATTCTATCCTGGATGCGAGCTCCTAAGGGCGCCATGTCCTTTCCATCTACCATTGAAGCCCTCTGCATTAAGGTCGTACCGTTCCTCT
ACGCCATGAACTCAGTCCCAATTCCAAGCGGTTTGTGTAACCAAATGGCTTTGAATCGCATGATAACTTTCCATGGCCACAAAGAAATGGAAAGGCGAGCAAAGACATTA
GGCGACACAACTGAAGGTGTGGCCCAAGTAGAACGCAAGAGGAAGTCCTCAGCCGTCGCATCAACCCCTCCACCAAAAGTAAAAAAACAAGGGTTGATGTAG
Protein sequenceShow/hide protein sequence
MAGSSSKHQDHIRVRSDGPELERPISRGKVEVENLDKDAVLDFLNERLRKQKEAHLKRTKEARRRKDERERLRFEEHQKAKSTLEIRSPPNEVAELHKKISDKLAQVSFA
KTRKTIEAVKSTLKRKEEKKKMFADLSEQVAELPTKMKTLEPERNLEVIAEELKDELEAMSPIDQESPPRKPREVAGPSKGKKKIGRSGPEERPSGDEAITKTPSINSLI
KAFGWKQFFKGHTKLRLGVVEKFYAAKLNANEFSVEISGKIVSFNAEAINELYDLPNDAETPGQIYVVSSTRRMARKALEVIVWPGTTWKVTPTGKYQLYPHQLTTEASV
WLFFIKKKIFPTRHDSTINLESAMLLYCIMTKKHVNLGDLIATSILSWMRAPKGAMSFPSTIEALCIKVVPFLYAMNSVPIPSGLCNQMALNRMITFHGHKEMERRAKTL
GDTTEGVAQVERKRKSSAVASTPPPKVKKQGLM