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PI0002511 (gene) of Melon (PI 482460) v1 genome

Gene IDPI0002511
OrganismCucumis metuliferus PI 482460 (Melon (PI 482460) v1)
DescriptionRetrotrans_gag domain-containing protein
Genome locationchr04:20085206..20087267
RNA-Seq ExpressionPI0002511
SyntenyPI0002511
Gene Ontology termsGO:0006807 - nitrogen compound metabolic process (biological process)
GO:0043170 - macromolecule metabolic process (biological process)
GO:0044238 - primary metabolic process (biological process)
GO:0003824 - catalytic activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0042035.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.9e-0647.56Show/hide
Query:  TGTKSNFRNNSEAKRKYAESTHRGTSLRLFKSLAELTGIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAGHED
        T  +S+  N+S     Y ES H    + +F S+    GI+R  DV  LHAVFRAK  GG GGG+M PR+SR RRQ Q G +D
Subjt:  TGTKSNFRNNSEAKRKYAESTHRGTSLRLFKSLAELTGIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAGHED

KAA0045180.1 uncharacterized protein E6C27_scaffold30G001810 [Cucumis melo var. makuwa]6.0e-0562.22Show/hide
Query:  GIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAGHED
        GIVR  DV  +HAVF+AK AG  GGG+M PR+SR RRQ Q G +D
Subjt:  GIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAGHED

TYK11725.1 uncharacterized protein E5676_scaffold304G00370 [Cucumis melo var. makuwa]7.9e-0569.05Show/hide
Query:  GIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAG
        GIVR  DV  LHAV RAK+AGG GGG+M PR+SR RRQ Q G
Subjt:  GIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAG

TYK17971.1 DNA/RNA polymerases superfamily protein [Cucumis melo var. makuwa]1.9e-0647.56Show/hide
Query:  TGTKSNFRNNSEAKRKYAESTHRGTSLRLFKSLAELTGIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAGHED
        T  +S+  N+S     Y ES H    + +F S+    GI+R  DV  LHAVFRAK  GG GGG+M PR+SR RRQ Q G +D
Subjt:  TGTKSNFRNNSEAKRKYAESTHRGTSLRLFKSLAELTGIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAGHED

TYK27372.1 uncharacterized protein E5676_scaffold325G00500 [Cucumis melo var. makuwa]6.0e-0562.22Show/hide
Query:  GIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAGHED
        GIVR  DV  +HAVF+AK AG  GGG+M PR+SR RRQ Q G +D
Subjt:  GIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAGHED

TrEMBL top hitse value%identityAlignment
A0A5A7TKT0 Reverse transcriptase9.1e-0747.56Show/hide
Query:  TGTKSNFRNNSEAKRKYAESTHRGTSLRLFKSLAELTGIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAGHED
        T  +S+  N+S     Y ES H    + +F S+    GI+R  DV  LHAVFRAK  GG GGG+M PR+SR RRQ Q G +D
Subjt:  TGTKSNFRNNSEAKRKYAESTHRGTSLRLFKSLAELTGIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAGHED

A0A5A7TPS6 Retrotrans_gag domain-containing protein2.9e-0562.22Show/hide
Query:  GIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAGHED
        GIVR  DV  +HAVF+AK AG  GGG+M PR+SR RRQ Q G +D
Subjt:  GIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAGHED

A0A5D3CJL4 Retrotrans_gag domain-containing protein3.8e-0569.05Show/hide
Query:  GIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAG
        GIVR  DV  LHAV RAK+AGG GGG+M PR+SR RRQ Q G
Subjt:  GIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAG

A0A5D3D150 Reverse transcriptase9.1e-0747.56Show/hide
Query:  TGTKSNFRNNSEAKRKYAESTHRGTSLRLFKSLAELTGIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAGHED
        T  +S+  N+S     Y ES H    + +F S+    GI+R  DV  LHAVFRAK  GG GGG+M PR+SR RRQ Q G +D
Subjt:  TGTKSNFRNNSEAKRKYAESTHRGTSLRLFKSLAELTGIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAGHED

A0A5D3DV36 Retrotrans_gag domain-containing protein2.9e-0562.22Show/hide
Query:  GIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAGHED
        GIVR  DV  +HAVF+AK AG  GGG+M PR+SR RRQ Q G +D
Subjt:  GIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAGHED

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACTGGAACTAAGTCTAATTTCAGGAACAATTCAGAGGCCAAGAGGAAATATGCCGAGTCTACACACCGGGGAACTAGCCTAAGGCTGTTCAAGAGTTTAGCAGAGTT
GACAGGTATTGTTAGGGAGAGTGATGTCAGTCGGCTTCACGCTGTCTTCCGAGCTAAGCTAGCAGGTGGTTCGGGAGGAGGAATTATGTCACCGCGTTCTAGCAGATGTC
GTAGGCAGGAGCAAGCGGGACACGAGGATCTACTCAAGGATAGTCTGAAGGGGAATCTAGTACCCTAA
mRNA sequenceShow/hide mRNA sequence
ATGACTGGAACTAAGTCTAATTTCAGGAACAATTCAGAGGCCAAGAGGAAATATGCCGAGTCTACACACCGGGGAACTAGCCTAAGGCTGTTCAAGAGTTTAGCAGAGTT
GACAGGTATTGTTAGGGAGAGTGATGTCAGTCGGCTTCACGCTGTCTTCCGAGCTAAGCTAGCAGGTGGTTCGGGAGGAGGAATTATGTCACCGCGTTCTAGCAGATGTC
GTAGGCAGGAGCAAGCGGGACACGAGGATCTACTCAAGGATAGTCTGAAGGGGAATCTAGTACCCTAA
Protein sequenceShow/hide protein sequence
MTGTKSNFRNNSEAKRKYAESTHRGTSLRLFKSLAELTGIVRESDVSRLHAVFRAKLAGGSGGGIMSPRSSRCRRQEQAGHEDLLKDSLKGNLVP