| GenBank top hits | e value | %identity | Alignment |
|---|
| KAG6578972.1 LysM domain-containing GPI-anchored protein 1, partial [Cucurbita argyrosperma subsp. sororia] | 4.6e-160 | 95.59 | Show/hide |
Query: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
MASAPSKLYADDVSLLVVLLDTNPFFWST SLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSN LEDGRMPALCTRLL NLEEF
Subjt: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
Query: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
+IGDEQSIKEDP+GGTMSSLLSGSLSMALCYIQKVFRSGSLHP PRILCLQGSPDGPEQYVAIMN+IFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
Subjt: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
Query: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVSKLKRKTPE
YLKPQQMDGLFQYLSTVF TDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMG+VCSVCLSIFCK+HKKCSTCGSVFGETPV +DSVSKLKRKTPE
Subjt: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVSKLKRKTPE
|
|
| XP_004152842.1 general transcription and DNA repair factor IIH subunit TFB4 [Cucumis sativus] | 4.3e-166 | 98.98 | Show/hide |
Query: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
MASAPSKLYADDVSLLVVLLDTNPFFWSTS+LPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
Subjt: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
Query: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHP+PRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
Subjt: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
Query: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVSKLKRKTPE
YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCK+HKKCSTCGSVFGETPVELDSVSKLKRKTPE
Subjt: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVSKLKRKTPE
|
|
| XP_008441918.2 PREDICTED: LOW QUALITY PROTEIN: RNA polymerase II transcription factor B subunit 4 [Cucumis melo] | 4.0e-164 | 97.97 | Show/hide |
Query: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
Subjt: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
Query: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHP+PRILCLQGSPDGPEQYVAIMNAIFSAQRSMV IDSCYIGSHNSAFLQQASYITGGV
Subjt: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
Query: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVSKLKRKTPE
YLKPQQMDGLFQYL+TVFGTDLHSRTFLQLPKSVGVDFRASCFCH KTIDMGYVCSVCLSIFCK+HKKCSTCGSVFGETPVELDS+SKLKRKTPE
Subjt: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVSKLKRKTPE
|
|
| XP_023550583.1 RNA polymerase II transcription factor B subunit 4 [Cucurbita pepo subsp. pepo] | 4.6e-160 | 95.59 | Show/hide |
Query: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
MASAPSKLYADDVSLLVVLLDTNPFFWST SLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSN LEDGRMPALCTRLL NLEEF
Subjt: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
Query: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
+IGDEQSIKEDP+GGTMSSLLSGSLSMALCYIQKVFRSGSLHP PRILCLQGSPDGPEQYVAIMN+IFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
Subjt: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
Query: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVSKLKRKTPE
YLKPQQMDGLFQYLSTVF TDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMG+VCSVCLSIFCK+HKKCSTCGSVFGETPV +DSVSKLKRKTPE
Subjt: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVSKLKRKTPE
|
|
| XP_038886688.1 general transcription and DNA repair factor IIH subunit TFB4 [Benincasa hispida] | 4.4e-163 | 96.95 | Show/hide |
Query: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
MASAP KLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLL NLEEF
Subjt: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
Query: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
VI DEQS+KEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHP+PRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
Subjt: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
Query: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVSKLKRKTPE
YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCK+HKKCSTCGSVFGE+P+ELDSVSK KRKTPE
Subjt: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVSKLKRKTPE
|
|
| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0A0LMM2 Uncharacterized protein | 2.1e-166 | 98.98 | Show/hide |
Query: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
MASAPSKLYADDVSLLVVLLDTNPFFWSTS+LPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
Subjt: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
Query: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHP+PRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
Subjt: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
Query: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVSKLKRKTPE
YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCK+HKKCSTCGSVFGETPVELDSVSKLKRKTPE
Subjt: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVSKLKRKTPE
|
|
| A0A1S3B4H7 LOW QUALITY PROTEIN: RNA polymerase II transcription factor B subunit 4 | 1.9e-164 | 97.97 | Show/hide |
Query: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
Subjt: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
Query: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHP+PRILCLQGSPDGPEQYVAIMNAIFSAQRSMV IDSCYIGSHNSAFLQQASYITGGV
Subjt: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
Query: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVSKLKRKTPE
YLKPQQMDGLFQYL+TVFGTDLHSRTFLQLPKSVGVDFRASCFCH KTIDMGYVCSVCLSIFCK+HKKCSTCGSVFGETPVELDS+SKLKRKTPE
Subjt: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVSKLKRKTPE
|
|
| A0A6J1CM09 RNA polymerase II transcription factor B subunit 4 isoform X1 | 1.4e-159 | 94.92 | Show/hide |
Query: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
MAS PSKLYADDVSLL+VLLDTNPFFWSTSSLPFSKFLSHVLAFLNSIL LNQLNEVVVIGTGYASCKYLYNSSS+SN GLEDGRMPALCTRLLKNLEEF
Subjt: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
Query: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
VI DEQS+KEDP+GGTMSSLLSGSLSMALCYIQKVFRSGSLHP PRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
Subjt: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
Query: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVSKLKRKTPE
YLKPQQMDGLFQYLSTVF TDLHSR FLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCK+HKKCSTCGSVFGETPV++DSVSK KRKTPE
Subjt: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVSKLKRKTPE
|
|
| A0A6J1FJQ6 RNA polymerase II transcription factor B subunit 4 | 1.6e-158 | 94.93 | Show/hide |
Query: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
MASAPSKLYADDVSLLVVLLDTNPFFWST SLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSN LEDGRMPALCTRLL NLEEF
Subjt: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
Query: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
+IGDEQSI+EDP+GGTMSSLLSGSLSMALCYIQKVFRSGSLHP PRILCLQGSPDGPEQYVAIMN+IFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
Subjt: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
Query: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDS-VSKLKRKTPE
YLKPQQMDGLFQYLSTVF TDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMG+VCSVCLSIFCK+HKKCSTCGSVFGETPV +DS VSKLKRKTPE
Subjt: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDS-VSKLKRKTPE
|
|
| A0A6J1JZK7 RNA polymerase II transcription factor B subunit 4 | 3.2e-159 | 94.92 | Show/hide |
Query: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
MASAPSKLYADDVSLLVVLLDTNPFFWST SLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSN LEDGRMPALCTRLL NLEEF
Subjt: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMPALCTRLLKNLEEF
Query: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
+IGDEQSIKEDP+ GTMSSLLSGSLSMALCY+QKVFRSGSLHP PRILCLQGSPDGPEQYVAIMN+IFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
Subjt: VIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGV
Query: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVSKLKRKTPE
YLKPQQMDGLFQYLSTVF TDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMG+VCSVCLSIFCK+HKKCSTCGSVFGETPV +DSVSKLKRKTPE
Subjt: YLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVSKLKRKTPE
|
|
| SwissProt top hits | e value | %identity | Alignment |
|---|
| Q05B56 General transcription factor IIH subunit 3 | 1.6e-46 | 38.03 | Show/hide |
Query: DDVSLLVVLLDTNPFFWSTSSLPFSKF-----LSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLY----------------NSSSYSNHGLEDGRMPAL
D+++LLV+++DTNP +W +L S+F + V+ NS L +N+ N++ VI + ++LY SS ++ G +DG+ L
Subjt: DDVSLLVVLLDTNPFFWSTSSLPFSKF-----LSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLY----------------NSSSYSNHGLEDGRMPAL
Query: CTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPE--PRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNS
EE + K D +G +LL+GSL+ ALCYI ++ + + E RIL ++ + D QY+ MN IF+AQ+ + ID+C + S +S
Subjt: CTRLLKNLEEFVIGDEQSIKEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPE--PRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNS
Query: AFLQQASYITGGVYLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVS
LQQA ITGG+YLK QM L QYL VF D R+ L LP V VD+RA+CFCH+ I++GYVCSVCLSIFC + C+TC + F + L V
Subjt: AFLQQASYITGGVYLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVS
Query: KLKRK
K K+K
Subjt: KLKRK
|
|
| Q13889 General transcription factor IIH subunit 3 | 9.2e-47 | 37.58 | Show/hide |
Query: DDVSLLVVLLDTNPFFWSTSSLPFSKF-----LSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLY---------------NSSSYSNHGLEDGRMPALC
D+++LLV+++D NP +W +L S+F + V+ NS L +N+ N++ VI + ++LY N ++ G +DG+
Subjt: DDVSLLVVLLDTNPFFWSTSSLPFSKF-----LSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLY---------------NSSSYSNHGLEDGRMPALC
Query: TRLLKNLEEFVIGDEQSI--KEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPE--PRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHN
LL + E ++ + + + K D KG +LL+GSL+ ALCYI ++ + + E RIL ++ + D QY+ MN IF+AQ+ + ID+C + S +
Subjt: TRLLKNLEEFVIGDEQSI--KEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPE--PRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHN
Query: SAFLQQASYITGGVYLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSV
S LQQA ITGG+YLK QM L QYL VF D R+ L LP V VD+RA+CFCH+ I++GYVCSVCLSIFC + C+TC + F + L V
Subjt: SAFLQQASYITGGVYLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSV
Query: SKLKRK
K K+K
Subjt: SKLKRK
|
|
| Q86IB5 General transcription factor IIH subunit 3 | 2.6e-49 | 41.18 | Show/hide |
Query: FSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMP--------ALCTRLLKNLEEFVIGDEQ----SIKEDPKGGTMSSLL
F+KFL H + F+N+ L+LNQ N++ +I + +++ S+ + E + L K ++ ++ Q IK D + +SS
Subjt: FSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGRMP--------ALCTRLLKNLEEFVIGDEQ----SIKEDPKGGTMSSLL
Query: SGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGVYLKPQQMDGLFQYLSTVFGTD
S S+S+ALCYI ++ R + +PRIL SPD QY+++MN IFS+Q+ +P+DSC + +S FLQQAS++T G+YLKPQ+ + L QYL T F D
Subjt: SGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYITGGVYLKPQQMDGLFQYLSTVFGTD
Query: LHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVF
SR L P VD+RASCFCHK+ +D+GYVCSVCLSIFC + CSTCG+ F
Subjt: LHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVF
|
|
| Q8LF41 General transcription and DNA repair factor IIH subunit TFB4 | 1.1e-119 | 71.57 | Show/hide |
Query: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGR---MPALCTRLLKNL
M + SK Y+DDVSLLV+LLDTNP FWST+S+ FS+FLSHVLAFLN++L LNQLN+VVVI TGY+SC Y+Y+SS SNHG + MPA+ LLK L
Subjt: MASAPSKLYADDVSLLVVLLDTNPFFWSTSSLPFSKFLSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLEDGR---MPALCTRLLKNL
Query: EEFVIGDEQSIKEDPKGGTM-SSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYI
EEFV DE+ KE+ + S LLSGSLSMALCYIQ+VFRSG LHP+PRILCLQGSPDGPEQYVA+MN+IFSAQR MVPIDSCYIG NSAFLQQASYI
Subjt: EEFVIGDEQSIKEDPKGGTM-SSLLSGSLSMALCYIQKVFRSGSLHPEPRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNSAFLQQASYI
Query: TGGVYLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPV-ELDSVSKLKRKTP
TGGV+ P+Q+DGLFQYL+T+F TDLHSR F+QLPK +GVDFRASCFCHKKTIDMGY+CSVCLSIFC++HKKCSTCGSVFG++ + + S S KRK P
Subjt: TGGVYLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPV-ELDSVSKLKRKTP
|
|
| Q8VD76 General transcription factor IIH subunit 3 | 4.6e-46 | 38.69 | Show/hide |
Query: DDVSLLVVLLDTNPFFWSTSSLPFSKF-----LSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLED-----GRMPALCT---------
D+++LLV+++DTNP +W +L S+F + V+ NS L +N+ N++ VI + + LY N GL D G C
Subjt: DDVSLLVVLLDTNPFFWSTSSLPFSKF-----LSHVLAFLNSILVLNQLNEVVVIGTGYASCKYLYNSSSYSNHGLED-----GRMPALCT---------
Query: RLLKNLEEFVIGDEQSI--KEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPE--PRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNS
LL E + + + + K D KG +LL+GSL+ ALCYI +V ++ + E RIL ++ + D QY+ MN IF+AQ+ + ID+C + S +S
Subjt: RLLKNLEEFVIGDEQSI--KEDPKGGTMSSLLSGSLSMALCYIQKVFRSGSLHPE--PRILCLQGSPDGPEQYVAIMNAIFSAQRSMVPIDSCYIGSHNS
Query: AFLQQASYITGGVYLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVS
LQQA ITGG+YLK QM L QYL VF D R+ L LP + VD+RA+CFCH+ I++GYVCSVCLSIFC + C+TC + F + L V
Subjt: AFLQQASYITGGVYLKPQQMDGLFQYLSTVFGTDLHSRTFLQLPKSVGVDFRASCFCHKKTIDMGYVCSVCLSIFCKYHKKCSTCGSVFGETPVELDSVS
Query: KLKRK
K K+K
Subjt: KLKRK
|
|
